PDB: 217686 件ウェブページステータス検索Chemie searchBIRD

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2RTB	APOSTREPTAVIDIN, PH 3.32, SPACE GROUP I222 分子名称: ACETATE ION, CHLORIDE ION, SODIUM ION, ... 著者 Katz, B.A. 登録日 1997-09-11 公開日 1998-10-14 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Binding of biotin to streptavidin stabilizes intersubunit salt bridges between Asp61 and His87 at low pH. J.Mol.Biol., 274, 1997
2RTH	STREPTAVIDIN-GLYCOLURIL COMPLEX, PH 2.50, SPACE GROUP I222 分子名称: ACETATE ION, GLYCOLURIL, STREPTAVIDIN 著者 Katz, B.A. 登録日 1997-09-11 公開日 1998-10-14 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.56 Å) 主引用文献 Binding of biotin to streptavidin stabilizes intersubunit salt bridges between Asp61 and His87 at low pH. J.Mol.Biol., 274, 1997
2RTP	STREPTAVIDIN-2-IMINOBIOTIN COMPLEX, PH 3.25, SPACE GROUP I222 分子名称: 2-IMINOBIOTIN, STREPTAVIDIN 著者 Katz, B.A. 登録日 1997-09-11 公開日 1998-10-14 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Binding of biotin to streptavidin stabilizes intersubunit salt bridges between Asp61 and His87 at low pH. J.Mol.Biol., 274, 1997
2RTE	STREPTAVIDIN-BIOTIN COMPLEX, PH 1.90, SPACE GROUP I222 分子名称: BIOTIN, STREPTAVIDIN, SULFATE ION 著者 Katz, B.A. 登録日 1997-09-11 公開日 1998-10-14 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Binding of biotin to streptavidin stabilizes intersubunit salt bridges between Asp61 and His87 at low pH. J.Mol.Biol., 274, 1997
7M4M	Crystal structure of RBR E3 ligase RNF216 with ubiquitin 分子名称: E3 ubiquitin-protein ligase RNF216, GLYCEROL, Ubiquitin, ... 著者 Cotton, T.R, Lechtenberg, B.C. 登録日 2021-03-21 公開日 2022-01-05 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.39 Å) 主引用文献 Structural basis of K63-ubiquitin chain formation by the Gordon-Holmes syndrome RBR E3 ubiquitin ligase RNF216. Mol.Cell, 82, 2022
2RTF	STREPTAVIDIN-BIOTIN COMPLEX, PH 2.00, SPACE GROUP I222 分子名称: BIOTIN, STREPTAVIDIN, SULFATE ION 著者 Katz, B.A. 登録日 1997-09-11 公開日 1998-10-14 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.47 Å) 主引用文献 Binding of biotin to streptavidin stabilizes intersubunit salt bridges between Asp61 and His87 at low pH. J.Mol.Biol., 274, 1997
5Z3N	Structure of large fragment of DNA Polymerase I from Thermus aquaticus Host-Guest complex with the unnatural base 5fC pair with dA 分子名称: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, DNA (5'-D(*AP*AP*AP*CP*GP*GP*CP*GP*CP*CP*GP*(5FC)P*GP*GP*TP*C)-3'), DNA (5'-D(*GP*AP*CP*CP*AP*CP*GP*GP*CP*GP*CP*(DOC))-3'), ... 著者 Zeng, H, Mondal, M, Song, R.Y, Zhang, J, Xia, B, Gao, Y.Q, Yi, C.Q. 登録日 2018-01-08 公開日 2018-11-21 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.91 Å) 主引用文献 Unnatural Cytosine Bases Recognized as Thymines by DNA Polymerases by the Formation of the Watson-Crick Geometry. Angew. Chem. Int. Ed. Engl., 58, 2019
3KGF	The structure of 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase from Mycobacterium tuberculosis complexed with phenylalanine and tryptophan 分子名称: CHLORIDE ION, GLYCEROL, MANGANESE (II) ION, ... 著者 Parker, E.J, Jameson, G.B, Jiao, W, Webby, C.J, Baker, E.N, Baker, H.M, Mycobacterium Tuberculosis Structural Proteomics Project (XMTB) 登録日 2009-10-29 公開日 2010-07-28 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Synergistic allostery, a sophisticated regulatory network for the control of aromatic amino acid biosynthesis in Mycobacterium tuberculosis J.Biol.Chem., 285, 2010
4TMX	Translation initiation factor eIF5B (517-858) mutant D533N from C. thermophilum, bound to GTP and sodium 分子名称: 1,2-ETHANEDIOL, ACETIC ACID, GUANOSINE-5'-TRIPHOSPHATE, ... 著者 Kuhle, B, Ficner, R. 登録日 2014-06-02 公開日 2014-09-24 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 A monovalent cation acts as structural and catalytic cofactor in translational GTPases. Embo J., 33, 2014
5V4K	Crystal structure of NEDD4 LIR-fused human LC3B_2-119 分子名称: GLYCEROL, Microtubule-associated proteins 1A/1B light chain 3B,Microtubule-associated proteins 1A/1B light chain 3B,Microtubule-associated proteins 1A/1B light chain 3B, SULFATE ION 著者 Qiu, Y, Zheng, Y, Schulman, B. 登録日 2017-03-09 公開日 2017-05-17 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (2.099 Å) 主引用文献 Insights into links between autophagy and the ubiquitin system from the structure of LC3B bound to the LIR motif from the E3 ligase NEDD4. Protein Sci., 26, 2017
2Y2G	PENICILLIN-BINDING PROTEIN 1B (PBP-1B) IN COMPLEX WITH AN ALKYL BORONATE (A01) 分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, PENICILLIN-BINDING PROTEIN 1B, ... 著者 Contreras-Martel, C, Amoroso, A, Woon, E.C, Zervosen, A, Inglis, S, Martins, A, Verlaine, O, Rydzik, A, Job, V, Luxen, A, Joris, B, Schofield, C.J, Dessen, A. 登録日 2010-12-15 公開日 2011-08-03 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Structure-Guided Design of Cell Wall Biosynthesis Inhibitors that Overcome Beta-Lactam Resistance in Staphylococcus Aureus (Mrsa). Acs Chem.Biol., 6, 2011
4AYG	Lactobacillus reuteri N-terminally truncated glucansucrase GTF180 in orthorhombic apo-form 分子名称: ACETIC ACID, CALCIUM ION, GLUCANSUCRASE, ... 著者 Pijning, T, Vujicic-Zagar, A, Kralj, S, Dijkhuizen, L, Dijkstra, B.W. 登録日 2012-06-21 公開日 2013-07-03 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Flexibility of Truncated and Full-Length Glucansucrase Gtf180 Enzymes from Lactobacillus Reuteri 180. FEBS J., 281, 2014
9BDN	80S ribosome with angiogenin and tRNAAla 分子名称: 18S rRNA, 28S rRNA, 40S ribosomal protein S10, ... 著者 Loveland, A.B, Korostelev, A.A. 登録日 2024-04-12 公開日 2024-07-24 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Structural mechanism of angiogenin activation by the ribosome. Nature, 630, 2024
8BJC	Full length structure of the apo-state LpMIP. 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, GLYCEROL, ... 著者 Whittaker, J.J, Guskov, A, Goretzki, B, Hellmich, U.A. 登録日 2022-11-03 公開日 2023-09-06 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.71 Å) 主引用文献 Legionella pneumophila macrophage infectivity potentiator protein appendage domains modulate protein dynamics and inhibitor binding. Int.J.Biol.Macromol., 252, 2023
9ASI	Cryo-EM structure of the active Lactococcus lactis Csm bound to target in pre-cleavage stage 分子名称: ADENOSINE MONOPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, CRISPR RNA, ... 著者 Wang, B, Goswami, H.N, Li, H. 登録日 2024-02-25 公開日 2024-08-14 実験手法 ELECTRON MICROSCOPY (2.79 Å) 主引用文献 Molecular basis for cA6 synthesis by a type III-A CRISPR-Cas enzyme and its conversion to cA4 production. Nucleic Acids Res., 2024
1VWL	STREPTAVIDIN-CYCLO-[5-S-VALERAMIDE-HPQGPPC]K-NH2, PH 3.5, I222 COMPLEX 分子名称: PENTANOIC ACID, PEPTIDE LIGAND CONTAINING HPQ, STREPTAVIDIN 著者 Katz, B.A, Cass, R.T. 登録日 1997-03-03 公開日 1998-03-18 最終更新日 2024-06-05 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 In crystals of complexes of streptavidin with peptide ligands containing the HPQ sequence the pKa of the peptide histidine is less than 3.0. J.Biol.Chem., 272, 1997
8W01	Crystal structure of DUF1735 domain-containing protein (GH18-like) from Bacteroides faecium at 2.7 A resolution (Space group C2) 分子名称: DUF1735 domain-containing protein 著者 Sastre, D.E, Navarro, M.V.A.S, Sultana, N, Sundberg, E.J. 登録日 2024-02-13 公開日 2024-05-29 最終更新日 2024-06-26 実験手法 X-RAY DIFFRACTION (2.67 Å) 主引用文献 Human gut microbes express functionally distinct endoglycosidases to metabolize the same N-glycan substrate. Nat Commun, 15, 2024
6DQY	Crystal Structure analysis of Superoxide Dismutase from Trichoderma reesei 分子名称: MANGANESE (II) ION, Superoxide dismutase 著者 Mendoza, E.R, Stelmastchuk, L.B.F, Ferreira Junior, J.R.S, Garratt, R.C. 登録日 2018-06-11 公開日 2018-12-12 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Crystal Structure of Superoxide Dismutase from Trichoderma reesei To Be Published
1VWK	STREPTAVIDIN-CYCLO-[5-S-VALERAMIDE-HPQGPPC]K-NH2 分子名称: PENTANOIC ACID, PEPTIDE LIGAND CONTAINING HPQ, STREPTAVIDIN 著者 Katz, B.A, Cass, R.T. 登録日 1997-03-03 公開日 1998-03-18 最終更新日 2024-06-05 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 In crystals of complexes of streptavidin with peptide ligands containing the HPQ sequence the pKa of the peptide histidine is less than 3.0. J.Biol.Chem., 272, 1997
8WZT	SFX structure of an Mn-carbonyl complex immobilized in hen egg white lysozyme microcrystals, 1 microsecond after photoexcitation at RT. 分子名称: CHLORIDE ION, Lysozyme C, SODIUM ION, ... 著者 Maity, B, Shoji, M, Luo, F, Nakane, T, Abe, S, Owada, S, Kang, J, Tono, K, Tanaka, R, Thuc, T.T, Kojima, M, Hishikawa, Y, Tanaka, J, Tian, J, Noya, H, Nakasuji, Y, Asanuma, A, Yao, X, Iwata, S, Shigeta, Y, Nango, E, Ueno, T. 登録日 2023-11-02 公開日 2024-07-31 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Real-time observation of a metal complex-driven reaction intermediate using a porous protein crystal and serial femtosecond crystallography. Nat Commun, 15, 2024
8XY0	Activity-stability trade-off observed in variants at position 315 of the GH10 xylanase XynR 分子名称: CALCIUM ION, DI(HYDROXYETHYL)ETHER, Endo-1,4-beta-xylanase A 著者 Nakamura, T, Takita, T, Mizutani, K, Mikami, B, Nakamura, S, Yasukawa, K. 登録日 2024-01-19 公開日 2024-05-22 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Activity-stability trade-off observed in variants at position 315 of the GH10 xylanase XynR. Sci Rep, 14, 2024
6DRY	Structural Determinants of Activation and Biased Agonism at the 5-HT2B Receptor 分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (8beta)-N-[(2S)-1-hydroxybutan-2-yl]-6-methyl-9,10-didehydroergoline-8-carboxamide, 5HT2B receptor, ... 著者 McCorvy, J.D, Wacker, D, Wang, S, Agegnehu, B, Liu, J, Lansu, K, Tribo, A.R, Olsen, R.H.J, Che, T, Jin, J, Roth, B.L. 登録日 2018-06-13 公開日 2018-08-29 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.918 Å) 主引用文献 Structural determinants of 5-HT2Breceptor activation and biased agonism. Nat. Struct. Mol. Biol., 25, 2018
7NF5	Crystal structure of MG-132 covalently bound to the main protease (3CLpro/Mpro) of SARS-CoV-2 in spacegroup C2. 分子名称: 1,2-ETHANEDIOL, 3C-like proteinase, CHLORIDE ION, ... 著者 Costanzi, E, Demitri, N, Giabbai, B, Storici, P. 登録日 2021-02-05 公開日 2021-04-07 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.94 Å) 主引用文献 Structural and Biochemical Analysis of the Dual Inhibition of MG-132 against SARS-CoV-2 Main Protease (Mpro/3CLpro) and Human Cathepsin-L. Int J Mol Sci, 22, 2021
6DS1	Crystal structure of Cj0485 dehydrogenase in complex with NADP+ 分子名称: GLYCEROL, MAGNESIUM ION, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ... 著者 Pluvinage, B, Boraston, A.B. 登録日 2018-06-13 公開日 2019-07-10 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.119 Å) 主引用文献 The gastrointestinal pathogen Campylobacter jejuni metabolizes sugars with potential help from commensal Bacteroides vulgatus. Commun Biol, 3, 2020
8YLZ	Structure of a cis-Geranylfarnesyl Diphosphate Synthase from Streptomyces clavuligerus 分子名称: Isoprenyl transferase 著者 Li, F.R, Wang, Q.L, Pan, X.M, Dong, L.B. 登録日 2024-03-07 公開日 2024-05-08 最終更新日 2024-07-10 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Discovery, Structure, and Engineering of a cis-Geranylfarnesyl Diphosphate Synthase. Angew.Chem.Int.Ed.Engl., 63, 2024

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