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4A3I
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RNA Polymerase II binary complex with DNA
分子名称: 5'-D(*GP*GP*CP*AP*CP*AP*AP*CP*TP*GP*CP*GP*GP*CP*T)-3', DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB11, ...
著者Cheung, A.C.M, Sainsbury, S, Cramer, P.
登録日2011-09-30
公開日2012-02-08
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3.8 Å)
主引用文献Structural basis of initial RNA polymerase II transcription.
EMBO J., 30, 2011
8SZT
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BU of 8szt by Molmil
Structure of Kdac1 from Acinetobacter baumannii
分子名称: CHLORIDE ION, Histone deacetylase domain-containing protein, POTASSIUM ION, ...
著者Watson, P.R, Christianson, D.W.
登録日2023-05-30
公開日2023-09-06
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure and Function of Kdac1, a Class II Deacetylase from the Multidrug-Resistant Pathogen Acinetobacter baumannii .
Biochemistry, 62, 2023
6WN7
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BU of 6wn7 by Molmil
Homo sapiens S100A5
分子名称: CALCIUM ION, Protein S100-A5
著者Perkins, A, Harms, M.J, Wong, C.E, Wheeler, L.C.
登録日2020-04-22
公開日2020-09-30
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Learning peptide recognition rules for a low-specificity protein.
Protein Sci., 29, 2020
6WUK
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BU of 6wuk by Molmil
Crystal structure of mouse DXO in complex with CoA
分子名称: COENZYME A, Decapping and exoribonuclease protein
著者Doamekpor, S.K, Tong, L.
登録日2020-05-04
公開日2020-05-20
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.599 Å)
主引用文献DXO/Rai1 enzymes remove 5'-end FAD and dephospho-CoA caps on RNAs.
Nucleic Acids Res., 48, 2020
6WP5
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BU of 6wp5 by Molmil
Pyruvate Kinase M2 mutant-S37D
分子名称: 1,6-di-O-phosphono-beta-D-fructofuranose, GLYCEROL, MAGNESIUM ION, ...
著者Nandi, S, Razzaghi, M, Srivastava, D, Dey, M.
登録日2020-04-26
公開日2020-09-30
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.17 Å)
主引用文献Structural basis for allosteric regulation of pyruvate kinase M2 by phosphorylation and acetylation.
J.Biol.Chem., 295, 2020
6WTD
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BU of 6wtd by Molmil
Monomer yeast ATP synthase Fo reconstituted in nanodisc with inhibitor of Bedaquiline bound
分子名称: ATP synthase protein 8, ATP synthase subunit 4, mitochondrial, ...
著者Mueller, D.M, Srivastava, A.P, Symersky, J, Luo, M, Liao, M.F.
登録日2020-05-02
公開日2020-08-26
最終更新日2020-10-07
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Bedaquiline inhibits the yeast and human mitochondrial ATP synthases.
Commun Biol, 3, 2020
6WME
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BU of 6wme by Molmil
Human Sun2-KASH3 complex
分子名称: Nesprin-3, POTASSIUM ION, SUN domain-containing protein 2
著者Cruz, V.E, Schwartz, T.U.
登録日2020-04-21
公開日2020-12-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Structural Analysis of Different LINC Complexes Reveals Distinct Binding Modes.
J.Mol.Biol., 432, 2020
6WQV
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BU of 6wqv by Molmil
GH5-4 broad specificity endoglucanase from Ruminococcus champanellensis with bound cellotriose
分子名称: 1,2-ETHANEDIOL, Endoglucanase, NITRATE ION, ...
著者Bianchetti, C.M, Bingman, C.A, Smith, R.W, Glasgow, E.M, Fox, B.G.
登録日2020-04-29
公開日2020-11-18
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献A structural and kinetic survey of GH5_4 endoglucanases reveals determinants of broad substrate specificity and opportunities for biomass hydrolysis.
J.Biol.Chem., 295, 2020
6WXY
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crystal structure of cA6-bound Card1
分子名称: Card1, cA6
著者Rostol, J, Xie, W, Patel, D.J, Marraffini, L.
登録日2020-05-12
公開日2020-12-30
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The Card1 nuclease provides defence during type III CRISPR immunity.
Nature, 590, 2021
6WY9
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Tcur3481-Tcur3483 steroid ACAD G363A variant
分子名称: Acyl-CoA dehydrogenase domain protein Tcur3481, Acyl-CoA dehydrogenase domain protein Tcur3483, CHLORIDE ION, ...
著者Kimber, M.S, Stirling, A.J, Seah, S.Y.K.
登録日2020-05-12
公開日2020-10-28
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A Key Glycine in Bacterial Steroid-Degrading Acyl-CoA Dehydrogenases Allows Flavin-Ring Repositioning and Modulates Substrate Side Chain Specificity.
Biochemistry, 59, 2020
6X1V
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BU of 6x1v by Molmil
Structure of pHis Fab (SC44-8) in complex with pHis mimetic peptide
分子名称: 1,2-ETHANEDIOL, ACLYana-3-pTza peptide, SC44-8 Heavy chain, ...
著者Kalagiri, R, Stanfield, R, Wilson, I.A, Hunter, T.
登録日2020-05-19
公開日2021-02-03
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.11 Å)
主引用文献Structural basis for differential recognition of phosphohistidine-containing peptides by 1-pHis and 3-pHis monoclonal antibodies.
Proc.Natl.Acad.Sci.USA, 118, 2021
4Z0X
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BU of 4z0x by Molmil
Structure of Hepatitis C Virus Envelope glycoprotein E2 antigenic region 434-446 bound to the broadly neutralizing antibody HC26AM
分子名称: Antibody HC26AM heavy chain variable domain, Antibody HC26AM light chain variable domain, HCV E2 Antigen (residues 432-446)
著者Rangarajan, S, Shahid, S, Mariuzza, R.A.
登録日2015-03-26
公開日2016-07-20
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Affinity maturation of a broadly neutralizing human monoclonal antibody that prevents acute hepatitis C virus infection in mice.
Hepatology, 64, 2016
4ZJ1
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BU of 4zj1 by Molmil
Crystal Structure of p-acrylamido-phenylalanine modified TEM1 beta-lactamase from Escherichia coli : V216AcrF mutant
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Beta-lactamase TEM, DI(HYDROXYETHYL)ETHER, ...
著者Xiao, H, Nasertorabi, F, Choi, S, Han, G.W, Reed, S.A, Stevens, R.C, Schultz, P.G.
登録日2015-04-28
公開日2015-05-20
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献Exploring the potential impact of an expanded genetic code on protein function.
Proc.Natl.Acad.Sci.USA, 112, 2015
4ZJ2
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BU of 4zj2 by Molmil
Crystal Structure of p-acrylamido-phenylalanine modified TEM1 beta-lactamase from Escherichia coli :E166N mutant
分子名称: Beta-lactamase TEM
著者Xiao, H, Nasertorabi, F, Choi, S, Han, G.W, Reed, S.A, Stevens, C.S, Schultz, P.G.
登録日2015-04-28
公開日2015-05-20
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Exploring the potential impact of an expanded genetic code on protein function.
Proc.Natl.Acad.Sci.USA, 112, 2015
6MSF
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BU of 6msf by Molmil
F6 APTAMER MS2 COAT PROTEIN COMPLEX
分子名称: PROTEIN (MS2 PROTEIN CAPSID), RNA (5'-R(*CP*AP*GP*UP*CP*AP*CP*UP*GP*G)-3'), RNA (5'-R(*CP*CP*AP*CP*AP*GP*UP*CP*AP*CP*UP*GP*GP*G)-3')
著者Convery, M.A, Rowsell, S, Stonehouse, N.J, Ellington, A.D, Hirao, I, Murray, J.B, Peabody, D.S, Phillips, S.E.V, Stockley, P.G.
登録日1998-01-06
公開日1998-07-08
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of an RNA aptamer-protein complex at 2.8 A resolution.
Nat.Struct.Biol., 5, 1998
5T0H
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BU of 5t0h by Molmil
Structural basis for dynamic regulation of the human 26S proteasome
分子名称: 26S protease regulatory subunit 10B, 26S protease regulatory subunit 4, 26S protease regulatory subunit 6A, ...
著者Chen, S, Wu, J, Lu, Y, Ma, Y.B, Lee, B.H, Yu, Z, Ouyang, Q, Finley, D, Kirschner, M.W, Mao, Y.
登録日2016-08-16
公開日2016-10-19
最終更新日2016-11-30
実験手法ELECTRON MICROSCOPY (6.8 Å)
主引用文献Structural basis for dynamic regulation of the human 26S proteasome.
Proc.Natl.Acad.Sci.USA, 113, 2016
2XE6
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BU of 2xe6 by Molmil
The complete reaction cycle of human phosphoglycerate kinase: The open binary complex with 3PG
分子名称: 3-PHOSPHOGLYCERIC ACID, PHOSPHOGLYCERATE KINASE 1
著者Cliff, M.J, Baxter, N.J, Blackburn, G.M, Merli, A, Vas, M, Waltho, J.P, Bowler, M.W.
登録日2010-05-11
公開日2011-01-19
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献A Spring Loaded Release Mechanism Regulates Domain Movement and Catalysis in Phosphoglycerate Kinase.
J.Biol.Chem., 286, 2011
3CTS
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BU of 3cts by Molmil
CRYSTALLOGRAPHIC REFINEMENT AND ATOMIC MODELS OF TWO DIFFERENT FORMS OF CITRATE SYNTHASE AT 2.7 AND 1.7 ANGSTROMS RESOLUTION
分子名称: CITRATE SYNTHASE, CITRIC ACID, COENZYME A
著者Remington, S, Wiegand, G, Huber, R.
登録日1984-01-27
公開日1984-07-20
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystallographic refinement and atomic models of two different forms of citrate synthase at 2.7 and 1.7 A resolution.
J.Mol.Biol., 158, 1982
2YAK
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BU of 2yak by Molmil
Structure of death-associated protein Kinase 1 (dapk1) in complex with a ruthenium octasporine ligand (OSV)
分子名称: DEATH-ASSOCIATED PROTEIN KINASE 1, RUTHENIUM OCTASPORINE 4
著者Feng, L, Geisselbrecht, Y, Blanck, S, Wilbuer, A, Atilla-Gokcumen, G.E, Filippakopoulos, P, Kraeling, K, Celik, M.A, Harms, K, Maksimoska, J, Marmorstein, R, Frenking, G, Knapp, S, Essen, L.-O, Meggers, E.
登録日2011-02-23
公開日2011-04-27
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structurally Sophisticated Octahedral Metal Complexes as Highly Selective Protein Kinase Inhibitors.
J.Am.Chem.Soc., 133, 2011
3UF1
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BU of 3uf1 by Molmil
Crystal Structure of Vimentin (fragment 144-251) from Homo sapiens, Northeast Structural Genomics Consortium Target HR4796B
分子名称: Vimentin
著者Kuzin, A, Abashidze, M, Vorobiev, S.M, Patel, P, Xiao, R, Ciccosanti, C, Shastry, R, Everett, J.K, Nair, R, Acton, T.B, Rost, B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
登録日2011-10-31
公開日2011-11-30
最終更新日2013-04-24
実験手法X-RAY DIFFRACTION (2.81 Å)
主引用文献The structure of vimentin linker 1 and rod 1B domains characterized by site-directed spin-labeling electron paramagnetic resonance (SDSL-EPR) and X-ray crystallography.
J.Biol.Chem., 287, 2012
4XPN
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BU of 4xpn by Molmil
Crystal Structure of Protein Phosphate 1 complexed with PP1 binding domain of GADD34
分子名称: GLYCEROL, MANGANESE (II) ION, PHOSPHATE ION, ...
著者Choy, M.S, Peti, W, Page, R.
登録日2015-01-17
公開日2015-07-01
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.285 Å)
主引用文献Structural and Functional Analysis of the GADD34:PP1 eIF2 alpha Phosphatase.
Cell Rep, 11, 2015
5EBI
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BU of 5ebi by Molmil
Crystal structure of a DNA-RNA chimera in complex with Ba2+ ions: a case of unusual multi-domain twinning
分子名称: BARIUM ION, DNA/RNA (5'-D(*C)-R(P*G)-D(P*C)-R(P*G)-D(P*C)-R(P*G)-3')
著者Gilski, M, Drozdzal, P, Kierzek, R, Jaskolski, M.
登録日2015-10-19
公開日2016-02-10
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.09 Å)
主引用文献Atomic resolution structure of a chimeric DNA-RNA Z-type duplex in complex with Ba(2+) ions: a case of complicated multi-domain twinning.
Acta Crystallogr D Struct Biol, 72, 2016
1EUO
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BU of 1euo by Molmil
Crystal structure of nitrophorin 2 (prolixin-S)
分子名称: AMMONIA, NITROPHORIN 2, PROTOPORPHYRIN IX CONTAINING FE
著者Andersen, J.F, Montfort, W.R.
登録日2000-04-17
公開日2000-05-10
最終更新日2018-04-18
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The crystal structure of nitrophorin 2. A trifunctional antihemostatic protein from the saliva of Rhodnius prolixus
J.Biol.Chem., 275, 2000
1ENO
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BU of 1eno by Molmil
BRASSICA NAPUS ENOYL ACP REDUCTASE/NAD BINARY COMPLEX AT PH 8.0 AND ROOM TEMPERATURE
分子名称: ENOYL ACYL CARRIER PROTEIN REDUCTASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Rafferty, J.B, Rice, D.W.
登録日1995-10-18
公開日1996-10-14
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Common themes in redox chemistry emerge from the X-ray structure of oilseed rape (Brassica napus) enoyl acyl carrier protein reductase.
Structure, 3, 1995
1ERF
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BU of 1erf by Molmil
CONFORMATIONAL MAPPING OF THE N-TERMINAL FUSION PEPTIDE OF HIV-1 GP41 USING 13C-ENHANCED FOURIER TRANSFORM INFRARED SPECTROSCOPY (FTIR)
分子名称: TRANSMEMBRANE GLYCOPROTEIN
著者Gordon, L.M, Mobley, P.W, Pilpa, R, Sherman, M.A, Waring, A.J.
登録日2000-04-06
公開日2000-05-03
最終更新日2011-07-13
実験手法INFRARED SPECTROSCOPY
主引用文献Conformational mapping of the N-terminal peptide of HIV-1 gp41 in membrane environments using (13)C-enhanced Fourier transform infrared spectroscopy.
Biochim.Biophys.Acta, 1559, 2002

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