Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4KJU
DownloadVisualize
BU of 4kju by Molmil
Crystal structure of XIAP-Bir2 with a bound benzodiazepinone inhibitor.
分子名称: E3 ubiquitin-protein ligase XIAP, N-{(3S)-5-(4-aminobenzoyl)-1-[(2-methoxynaphthalen-1-yl)methyl]-2-oxo-2,3,4,5-tetrahydro-1H-1,5-benzodiazepin-3-yl}-N~2~-methyl-L-alaninamide, ZINC ION
著者Lukacs, C.M, Janson, C.A.
登録日2013-05-03
公開日2013-11-27
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Optimization of Benzodiazepinones as Selective Inhibitors of the X-Linked Inhibitor of Apoptosis Protein (XIAP) Second Baculovirus IAP Repeat (BIR2) Domain.
J.Med.Chem., 56, 2013
4UJ3
DownloadVisualize
BU of 4uj3 by Molmil
Crystal structure of human Rab11-Rabin8-FIP3
分子名称: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, RAB-3A-INTERACTING PROTEIN, ...
著者Vetter, M, Lorentzen, E.
登録日2015-04-08
公開日2015-08-12
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structure of Rab11-Fip3-Rabin8 Reveals Simultaneous Binding of Fip3 and Rabin8 Effectors to Rab11.
Nat.Struct.Mol.Biol., 22, 2015
4UN5
DownloadVisualize
BU of 4un5 by Molmil
Crystal structure of Cas9 bound to PAM-containing DNA target containing mismatches at positions 1-3
分子名称: CRISPR-ASSOCIATED ENDONUCLEASE CAS9/CSN1, MAGNESIUM ION, NON-TARGET DNA STRAND, ...
著者Anders, C, Niewoehner, O, Duerst, A, Jinek, M.
登録日2014-05-25
公開日2014-07-23
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural Basis of Pam-Dependent Target DNA Recognition by the Cas9 Endonuclease
Nature, 513, 2014
3D94
DownloadVisualize
BU of 3d94 by Molmil
Crystal structure of the insulin-like growth factor-1 receptor kinase in complex with PQIP
分子名称: 3-[cis-3-(4-methylpiperazin-1-yl)cyclobutyl]-1-(2-phenylquinolin-7-yl)imidazo[1,5-a]pyrazin-8-amine, CALCIUM ION, Insulin-like growth factor 1 receptor beta chain
著者Wu, J, Li, W, Miller, W.T, Hubbard, S.R.
登録日2008-05-26
公開日2008-07-29
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Small-molecule inhibition and activation-loop trans-phosphorylation of the IGF1 receptor
Embo J., 27, 2008
4UN4
DownloadVisualize
BU of 4un4 by Molmil
Crystal structure of Cas9 bound to PAM-containing DNA target with mismatches at positions 1-2
分子名称: CRISPR-ASSOCIATED ENDONUCLEASE CAS9/CSN1, MAGNESIUM ION, NON-TARGET DNA STRAND, ...
著者Anders, C, Niewoehner, O, Duerst, A, Jinek, M.
登録日2014-05-25
公開日2014-07-23
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.371 Å)
主引用文献Structural Basis of Pam-Dependent Target DNA Recognition by the Cas9 Endonuclease
Nature, 513, 2014
3MO1
DownloadVisualize
BU of 3mo1 by Molmil
Crystal structure of the non-neutralizing HIV antibody 13H11 Fab fragment
分子名称: ACETATE ION, ANTI-HIV-1 ANTIBODY 13H11 HEAVY CHAIN, ANTI-HIV-1 ANTIBODY 13H11 LIGHT CHAIN, ...
著者Nicely, N.I, Dennison, S.M, Kelsoe, G, Liao, H.-X, Alam, S.M, Haynes, B.F.
登録日2010-04-22
公開日2010-11-17
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structure of a Non-Neutralizing HIV-1 gp41 Envelope Antibody Demonstrates Neutralization Mechanism of gp41 Antibodies
To be Published
3DJB
DownloadVisualize
BU of 3djb by Molmil
Crystal structure of a HD-superfamily hydrolase (BT9727_1981) from Bacillus thuringiensis, Northeast Structural Genomics Consortium Target BuR114
分子名称: Hydrolase, HD family, MAGNESIUM ION
著者Forouhar, F, Su, M, Seetharaman, J, Vorobiev, S.M, Janjua, H, Fang, Y, Xiao, R, Cunningham, K, Maglaqui, M, Owen, L.A, Wang, D, Baran, M.C, Liu, J, Acton, T.B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
登録日2008-06-23
公開日2008-08-19
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Crystal structure of a HD-superfamily hydrolase (BT9727_1981) from Bacillus thuringiensis, Northeast Structural Genomics Consortium Target BuR114
To be Published
3DJK
DownloadVisualize
BU of 3djk by Molmil
Wild Type HIV-1 Protease with potent Antiviral inhibitor GRL-0255A
分子名称: (5R)-1,3-dioxepan-5-yl [(1S,2R)-1-benzyl-2-hydroxy-3-{[(4-methoxyphenyl)sulfonyl](2-methylpropyl)amino}propyl]carbamate, CHLORIDE ION, Protease, ...
著者Wang, Y.F, Weber, I.T.
登録日2008-06-23
公開日2008-09-30
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Flexible cyclic ethers/polyethers as novel P2-ligands for HIV-1 protease inhibitors: design, synthesis, biological evaluation, and protein-ligand X-ray studies
J.Med.Chem., 51, 2008
4KKD
DownloadVisualize
BU of 4kkd by Molmil
The X-ray crystal structure of Mannose-binding lectin-associated serine proteinase-3 reveals the structural basis for enzyme inactivity associated with the 3MC syndrome
分子名称: IMIDAZOLE, Mannan-binding lectin serine protease 1
著者Yongqing, T, Wilmann, P.G, Reeve, S.B, Coetzer, T.H, Smith, A.I, Whisstock, J.C, Pike, R.N, Wijeyewickrema, L.C.
登録日2013-05-05
公開日2013-07-03
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.5991 Å)
主引用文献The X-ray Crystal Structure of Mannose-binding Lectin-associated Serine Proteinase-3 Reveals the Structural Basis for Enzyme Inactivity Associated with the Carnevale, Mingarelli, Malpuech, and Michels (3MC) Syndrome.
J.Biol.Chem., 288, 2013
3M0H
DownloadVisualize
BU of 3m0h by Molmil
Crystal structure of Pseudomonas stutzeri L-rhamnose isomerase mutant S329F in complex with L-rhamnose
分子名称: L-RHAMNOSE, L-rhamnose isomerase, MANGANESE (II) ION
著者Yoshida, H, Takeda, K, Izumori, K, Kamitori, S.
登録日2010-03-03
公開日2010-11-10
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Elucidation of the role of Ser329 and the C-terminal region in the catalytic activity of Pseudomonas stutzeri L-rhamnose isomerase
Protein Eng.Des.Sel., 23, 2010
3DAF
DownloadVisualize
BU of 3daf by Molmil
The crystal structure of [Fe]-hydrogenase holoenzyme (HMD) from METHANOCALDOCOCCUS JANNASCHII cocrystallized with cyanide
分子名称: 5'-O-[(S)-{[2-(carboxymethyl)-6-hydroxy-3,5-dimethylpyridin-4-yl]oxy}(hydroxy)phosphoryl]guanosine, 5,10-methenyltetrahydromethanopterin hydrogenase, CARBON MONOXIDE, ...
著者Pilak, O, Warkentin, E, Shima, S, Thauer, R.K, Ermler, U.
登録日2008-05-29
公開日2008-12-09
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献The crystal structure of [Fe]-hydrogenase reveals the geometry of the active site.
Science, 321, 2008
4KPX
DownloadVisualize
BU of 4kpx by Molmil
Hin GlmU bound to WG766
分子名称: Bifunctional protein GlmU, MAGNESIUM ION, N-{4-[(4-hydroxy-3-nitrobenzoyl)amino]phenyl}pyridine-2-carboxamide, ...
著者Doig, P, Kazmirski, S.L, Boriack-Sjodin, P.A.
登録日2013-05-14
公開日2014-10-15
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Rational design of inhibitors of the bacterial cell wall synthetic enzyme GlmU using virtual screening and lead-hopping.
Bioorg.Med.Chem., 22, 2014
3MPL
DownloadVisualize
BU of 3mpl by Molmil
Crystal Structure of Bordetella pertussis BvgS VFT2 domain (Double Mutant F375E/Q461E)
分子名称: 1,2-ETHANEDIOL, Virulence sensor protein bvgS
著者Herrou, J, Bompard, C, Wintjens, R, Dupre, E, Willery, E, Villeret, V, Locht, C, Antoine, R, Jacob-Dubuisson, F.
登録日2010-04-27
公開日2010-10-06
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Periplasmic domain of the sensor-kinase BvgS reveals a new paradigm for the Venus flytrap mechanism.
Proc.Natl.Acad.Sci.USA, 107, 2010
3DJU
DownloadVisualize
BU of 3dju by Molmil
Crystal structure of human BTG2
分子名称: Protein BTG2
著者Yang, X, Morita, M, Wang, H, Suzuki, T, Bartlam, M, Yamamoto, T.
登録日2008-06-24
公開日2008-11-11
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献Crystal structures of human BTG2 and mouse TIS21 involved in suppression of CAF1 deadenylase activity
Nucleic Acids Res., 36, 2008
3MPW
DownloadVisualize
BU of 3mpw by Molmil
Structure of EUTM in 2-D protein membrane
分子名称: Ethanolamine utilization protein eutM, PHOSPHATE ION
著者Sagermann, M, Takenoya, M, Nikolakakis, K.
登録日2010-04-27
公開日2011-05-11
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystallographic insights into the pore structures and mechanisms of the EutL and EutM shell proteins of the ethanolamine-utilizing microcompartment of Escherichia coli.
J.Bacteriol., 192, 2010
4KLN
DownloadVisualize
BU of 4kln by Molmil
Structure of p97 N-D1 A232E mutant in complex with ATPgS
分子名称: MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, Transitional endoplasmic reticulum ATPase
著者Xia, D, Tang, W.K.
登録日2013-05-07
公開日2013-11-13
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.62 Å)
主引用文献Altered Intersubunit Communication Is the Molecular Basis for Functional Defects of Pathogenic p97 Mutants.
J.Biol.Chem., 288, 2013
3DBH
DownloadVisualize
BU of 3dbh by Molmil
Structural Dissection of a Gating Mechanism Preventing Misactivation of Ubiquitin by NEDD8's E1 (APPBP1-UBA3Arg190Ala-NEDD8Ala72Arg)
分子名称: NEDD8, NEDD8-activating enzyme E1 catalytic subunit, NEDD8-activating enzyme E1 regulatory subunit, ...
著者Souphron, J, Schulman, B.A.
登録日2008-05-31
公開日2008-08-12
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Structural dissection of a gating mechanism preventing misactivation of ubiquitin by NEDD8's E1.
Biochemistry, 47, 2008
3M25
DownloadVisualize
BU of 3m25 by Molmil
Crystallographic and Single Crystal Spectral Analysis of the Peroxidase Ferryl Intermediate
分子名称: Cytochrome c peroxidase, mitochondrial, PHOSPHATE ION, ...
著者Meharenna, Y.T, Poulos, T.L.
登録日2010-03-06
公開日2010-05-12
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Crystallographic and single-crystal spectral analysis of the peroxidase ferryl intermediate.
Biochemistry, 49, 2010
4KNK
DownloadVisualize
BU of 4knk by Molmil
Crystal structure of Staphylococcus aureus hydrolase AmiA
分子名称: 1,2-ETHANEDIOL, Bifunctional autolysin, DI(HYDROXYETHYL)ETHER, ...
著者Buettner, F.M, Zoll, S, Stehle, T.
登録日2013-05-10
公開日2014-03-12
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.124 Å)
主引用文献Structure-function analysis of Staphylococcus aureus amidase reveals the determinants of peptidoglycan recognition and cleavage.
J.Biol.Chem., 289, 2014
3DDI
DownloadVisualize
BU of 3ddi by Molmil
Crystal structure of the mimivirus NDK +Kpn-N62L-R107G triple mutant complexed with TDP
分子名称: MAGNESIUM ION, Nucleoside diphosphate kinase, THYMIDINE-5'-DIPHOSPHATE
著者Jeudy, S, Lartigue, A, Claverie, J.M, Abergel, A.
登録日2008-06-05
公開日2009-06-16
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Dissecting the unique nucleotide specificity of mimivirus nucleoside diphosphate kinase.
J.Virol., 83, 2009
3M2F
DownloadVisualize
BU of 3m2f by Molmil
Crystallographic and Single Crystal Spectral Analysis of the Peroxidase Ferryl Intermediate
分子名称: Cytochrome c peroxidase, mitochondrial, PHOSPHATE ION, ...
著者Meharenna, Y.T, Poulos, T.L.
登録日2010-03-07
公開日2010-05-12
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Crystallographic and single-crystal spectral analysis of the peroxidase ferryl intermediate.
Biochemistry, 49, 2010
4KNY
DownloadVisualize
BU of 4kny by Molmil
Crystal structure of the response regulator KdpE complexed to DNA in an active-like conformation
分子名称: KDP operon transcriptional regulatory protein KdpE, Promoter DNA
著者Kumar, S, Narayanan, A, Yernool, D.A.
登録日2013-05-10
公開日2014-02-19
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.945 Å)
主引用文献An asymmetric heterodomain interface stabilizes a response regulator-DNA complex.
Nat Commun, 5, 2014
3MQT
DownloadVisualize
BU of 3mqt by Molmil
Crystal structure of a mandelate racemase/muconate lactonizing enzyme from Shewanella pealeana
分子名称: MAGNESIUM ION, Mandelate racemase/muconate lactonizing protein
著者Agarwal, R, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2010-04-28
公開日2010-05-12
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal STRUCTURE OF A MANDELATE RACEMASE/MUCONATE LACTONIZING ENZYME FROM SHEWANELLA PEALEANA
To be Published
6AE3
DownloadVisualize
BU of 6ae3 by Molmil
Crystal structure of GSK3beta complexed with Morin
分子名称: 2-[2,4-bis(oxidanyl)phenyl]-3,5,7-tris(oxidanyl)chromen-4-one, GLYCEROL, Glycogen synthase kinase-3 beta
著者Kim, K.L, Cha, J.S, Kim, J.S, Ahn, J.S, Ha, N.C, Cho, H.S.
登録日2018-08-03
公開日2018-09-19
最終更新日2018-10-03
実験手法X-RAY DIFFRACTION (2.14 Å)
主引用文献Crystal structure of GSK3 beta in complex with the flavonoid, morin
Biochem. Biophys. Res. Commun., 504, 2018
3LZN
DownloadVisualize
BU of 3lzn by Molmil
Crystal Structure Analysis of the apo P19 protein from Campylobacter jejuni at 1.59 A at pH 9
分子名称: P19 protein, SULFATE ION, ZINC ION
著者Doukov, T.I, Chan, A.C.K, Scofield, M, Ramin, A.B, Tom-Yew, S.A.L, Murphy, M.E.P.
登録日2010-03-01
公開日2010-07-21
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献Structure and Function of P19, a High-Affinity Iron Transporter of the Human Pathogen Campylobacter jejuni.
J.Mol.Biol., 401, 2010

226262

件を2024-10-16に公開中

PDB statisticsPDBj update infoContact PDBjnumon