PDB: 10970 件ウェブページステータス検索Chemie searchBIRD

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2J79	Beta-glucosidase from Thermotoga maritima in complex with galacto- hydroximolactam 分子名称: (2E,3R,4R,5R,6S)-3,4,5-TRIHYDROXY-6-(HYDROXYMETHYL)-2-PIPERIDINONE, ACETATE ION, BETA-GLUCOSIDASE A, ... 著者 Gloster, T.M, Zechel, D, Vasella, A, Davies, G.J. 登録日 2006-10-06 公開日 2006-10-18 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.94 Å) 主引用文献 Glycosidase Inhibition: An Assessment of the Binding of 18 Putative Transition-State Mimics. J.Am.Chem.Soc., 129, 2007
2J7E	Beta-glucosidase from Thermotoga maritima in complex with methyl acetate-substituted glucoimidazole 分子名称: ACETATE ION, BETA-GLUCOSIDASE A, CALCIUM ION, ... 著者 Gloster, T.M, Zechel, D, Vasella, A, Davies, G.J. 登録日 2006-10-07 公開日 2006-10-18 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.19 Å) 主引用文献 Glycosidase Inhibition: An Assessment of the Binding of 18 Putative Transition-State Mimics. J.Am.Chem.Soc., 129, 2007
2J7H	Beta-glucosidase from Thermotoga maritima in complex with azafagomine 分子名称: ACETATE ION, AZAFAGOMINE, BETA-GLUCOSIDASE A, ... 著者 Gloster, T.M, Meloncelli, P, Stick, R.V, Zechel, D, Davies, G.J. 登録日 2006-10-08 公開日 2006-10-18 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Glycosidase Inhibition: An Assessment of the Binding of 18 Putative Transition-State Mimics. J.Am.Chem.Soc., 129, 2007
4KC8	Crystal Structure of Endo-1,5-alpha-L-arabinanase from Thermotoga petrophila RKU-1 in complex with TRIS 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, Glycoside hydrolase, ... 著者 Nascimento, A.F.Z, Polo, C.C, Santos, C.R, Costa, M.C.M.F, Mesa, A.N, Prade, R.A, Ruller, R, Squina, F.M, Murakami, M.T. 登録日 2013-04-24 公開日 2014-02-05 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.76 Å) 主引用文献 Mechanistic strategies for catalysis adopted by evolutionary distinct family 43 arabinanases. J.Biol.Chem., 289, 2014
4KC7	Crystal Structure of Endo-1,5-alpha-L-arabinanase from Thermotoga petrophila RKU-1 分子名称: CALCIUM ION, DI(HYDROXYETHYL)ETHER, Glycoside hydrolase, ... 著者 Nascimento, A.F.Z, Polo, C.C, Santos, C.R, Costa, M.C.M.F, Mesa, A.N, Prade, R.A, Ruller, R, Squina, F.M, Murakami, M.T. 登録日 2013-04-24 公開日 2014-02-05 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Mechanistic strategies for catalysis adopted by evolutionary distinct family 43 arabinanases. J.Biol.Chem., 289, 2014
5F3D	Structure of quinolinate synthase in complex with reaction intermediate W 分子名称: 2-IMINO,3-CARBOXY,5-OXO,6-HYDROXY HEXANOIC ACID, IRON/SULFUR CLUSTER, Quinolinate synthase A, ... 著者 Volbeda, A, Fontecilla-Camps, J.C. 登録日 2015-12-02 公開日 2016-08-31 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Crystal Structures of Quinolinate Synthase in Complex with a Substrate Analogue, the Condensation Intermediate, and Substrate-Derived Product. J.Am.Chem.Soc., 138, 2016
7F3O	Crystal structure of the GluA2o LBD in complex with glutamate and TAK-653 分子名称: 7-(4-cyclohexyloxyphenyl)-9-methyl-4$l^{6}-thia-1$l^{4},5,8-triazabicyclo[4.4.0]deca-1(10),6,8-triene 4,4-dioxide, ACETATE ION, GLUTAMIC ACID, ... 著者 Sogabe, S, Igaki, S, Hirokawa, A, Zama, Y, Lane, W, Snell, G. 登録日 2021-06-16 公開日 2021-07-28 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.44 Å) 主引用文献 Strictly regulated agonist-dependent activation of AMPA-R is the key characteristic of TAK-653 for robust synaptic responses and cognitive improvement. Sci Rep, 11, 2021
3L0O	Structure of RNA-free Rho transcription termination factor from Thermotoga maritima 分子名称: SODIUM ION, SULFATE ION, Transcription termination factor rho, ... 著者 Canals, A, Uson, I, Coll, M. 登録日 2009-12-10 公開日 2010-05-26 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 The Structure of RNA-Free Rho Termination Factor Indicates a Dynamic Mechanism of Transcript Capture J.Mol.Biol., 400, 2010
7EOB	Crystal structure of KIF1A Motor-Neck domain E239K mutant with ADP-Mg-AlFx 分子名称: ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, Kinesin-like protein KIF1A, ... 著者 Ogawa, T, Jiang, X, Hirokawa, N. 登録日 2021-04-21 公開日 2021-12-29 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.76 Å) 主引用文献 A neuropathy-associated kinesin KIF1A mutation hyper-stabilizes the motor-neck interaction during the ATPase cycle. Embo J., 41, 2022
7EO9	Crystal structure of KIF1A Motor-Neck domain with ADP-Mg-AlFx 分子名称: ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, Kinesin-like protein KIF1A, ... 著者 Ogawa, T, Jiang, X, Hirokawa, N. 登録日 2021-04-21 公開日 2021-12-29 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.57 Å) 主引用文献 A neuropathy-associated kinesin KIF1A mutation hyper-stabilizes the motor-neck interaction during the ATPase cycle. Embo J., 41, 2022
5JW7	Crystal structure of SopA-Trim56 complex 分子名称: E3 ubiquitin-protein ligase SopA, E3 ubiquitin-protein ligase TRIM56, ZINC ION 著者 Bhogaraju, S, Dikic, I. 登録日 2016-05-11 公開日 2017-02-15 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.849 Å) 主引用文献 Structural basis for the recognition and degradation of host TRIM proteins by Salmonella effector SopA. Nat Commun, 8, 2017
3G67	Crystal Structure of a Soluble Chemoreceptor from Thermotoga maritima 分子名称: Methyl-accepting chemotaxis protein 著者 Pollard, A.M, Bilwes, A.M, Crane, B.R. 登録日 2009-02-06 公開日 2009-07-28 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.17 Å) 主引用文献 The structure of a soluble chemoreceptor suggests a mechanism for propagating conformational signals. Biochemistry, 48, 2009
5NE6	Crystal structure of dimeric TmPep1050 aminopeptidase 分子名称: AMINOPEPTIDASE, CITRIC ACID 著者 Dutoit, R, Brandt, N, Bauvois, C. 登録日 2017-03-10 公開日 2018-05-16 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 How metal cofactors drive dimer-dodecamer transition of the M42 aminopeptidase TmPep1050 ofThermotoga maritima. J.Biol.Chem., 294, 2019
7F4C	The crystal structure of the immature holo-enzyme of homoserine dehydrogenase complexed with NADP and 1,4-butandiol from the hyperthermophilic archaeon Sulfurisphaera tokodaii. 分子名称: 1,4-BUTANEDIOL, Homoserine dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE 著者 Ogata, K, Kaneko, R, Kubota, T, Watanabe, K, Kurihara, E, Oshima, T, Yoshimune, K, Goto, M. 登録日 2021-06-18 公開日 2022-06-22 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Conformational changes in the catalytic region are responsible for heat-induced activation of hyperthermophilic homoserine dehydrogenase. Commun Biol, 5, 2022
3JUX	Structure of the translocation ATPase SecA from Thermotoga maritima 分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Protein translocase subunit secA 著者 Zimmer, J. 登録日 2009-09-15 公開日 2009-10-20 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Conformational flexibility and peptide interaction of the translocation ATPase SecA. J.Mol.Biol., 394, 2009
5FDF	Crystal structure of the monoclinic form of Thermotoga maritima Acetyl Esterase TM0077 (apo structure) at 1.76 Angstrom resolution 分子名称: ACETATE ION, CHLORIDE ION, Cephalosporin-C deacetylase 著者 Manoj, N, Singh, M.K. 登録日 2015-12-16 公開日 2016-04-27 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.76 Å) 主引用文献 An extended loop in CE7 carbohydrate esterase family is dispensable for oligomerization but required for activity and thermostability. J.Struct.Biol., 194, 2016
6BWV	Crystal Structure of the 4-1BB/4-1BBL Complex 分子名称: DI(HYDROXYETHYL)ETHER, Tumor necrosis factor ligand superfamily member 9, Tumor necrosis factor receptor superfamily member 9 著者 Oganesyan, V, Gilbreth, R.N, Baca, M. 登録日 2017-12-15 公開日 2018-05-09 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Crystal structure of the human 4-1BB/4-1BBL complex. J. Biol. Chem., 293, 2018
3G6B	Crystal structure of a Soluble Chemoreceptor from Thermotoga maritima Asn217Ile mutant 分子名称: Methyl-accepting chemotaxis protein 著者 Pollard, A.M, Bilwes, A.M, Crane, B.R. 登録日 2009-02-06 公開日 2009-07-28 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 The structure of a soluble chemoreceptor suggests a mechanism for propagating conformational signals. Biochemistry, 48, 2009
4YVZ	Structure of Thermotoga maritima DisA in complex with 3'-dATP/Mn2+ 分子名称: 3'-DEOXYADENOSINE-5'-TRIPHOSPHATE, DNA integrity scanning protein DisA, MANGANESE (II) ION 著者 Mueller, M, Deimling, T, Hopfner, K.-P, Witte, G. 登録日 2015-03-20 公開日 2015-06-03 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.495 Å) 主引用文献 Structural analysis of the diadenylate cyclase reaction of DNA-integrity scanning protein A (DisA) and its inhibition by 3'-dATP. Biochem.J., 469, 2015
4YXM	Structure of Thermotoga maritima DisA D75N mutant with reaction product c-di-AMP 分子名称: (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, (4S)-2-METHYL-2,4-PENTANEDIOL, DNA integrity scanning protein DisA 著者 Mueller, M, Deimling, T, Hopfner, K.-P, Witte, G. 登録日 2015-03-23 公開日 2015-06-03 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Structural analysis of the diadenylate cyclase reaction of DNA-integrity scanning protein A (DisA) and its inhibition by 3'-dATP. Biochem.J., 469, 2015
6NW5	Crystal structure of TmPep1050 aminopeptidase with its metal cofactors 分子名称: Aminopeptidase, COBALT (II) ION, HYDROXIDE ION, ... 著者 Dutoit, R. 登録日 2019-02-06 公開日 2019-10-23 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 How metal cofactors drive dimer-dodecamer transition of the M42 aminopeptidase TmPep1050 ofThermotoga maritima. J.Biol.Chem., 294, 2019
3DKT	Crystal structure of Thermotoga maritima encapsulin 分子名称: Maritimacin, Putative uncharacterized protein 著者 Sutter, M, Boehringer, D, Gutmann, S, Weber-Ban, E, Ban, N. 登録日 2008-06-26 公開日 2008-09-02 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (3.104 Å) 主引用文献 Structural basis of enzyme encapsulation into a bacterial nanocompartment Nat.Struct.Mol.Biol., 15, 2008
1OIN	Family 1 b-glucosidase from Thermotoga maritima 分子名称: 2-deoxy-2-fluoro-alpha-D-glucopyranose, BETA-GLUCOSIDASE A 著者 Gloster, T, Zechel, D.L, Boraston, A.B, Boraston, C.M, Macdonald, J.M, Tilbrook, D.M, Stick, R.V, Davies, G.J. 登録日 2003-06-19 公開日 2003-11-25 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Iminosugar Glycosidase Inhibitors: Structural and Thermodynamic Dissection of the Binding of Isofagomine and 1-Deoxynojirimycin to Beta-Glucosidases J.Am.Chem.Soc., 125, 2003
4YXJ	Structure of Thermotoga maritima DisA in complex with ApCpp 分子名称: DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, DNA integrity scanning protein DisA 著者 Mueller, M, Deimling, T, Hopfner, K.-P, Witte, G. 登録日 2015-03-23 公開日 2015-06-03 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.55 Å) 主引用文献 Structural analysis of the diadenylate cyclase reaction of DNA-integrity scanning protein A (DisA) and its inhibition by 3'-dATP. Biochem.J., 469, 2015
4BUB	CRYSTAL STRUCTURE OF MURE LIGASE FROM THERMOTOGA MARITIMA IN COMPLEX WITH ADP 分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, UDP-N-ACETYLMURAMOYL-L-ALANYL-D-GLUTAMATE--LD-LYSINE LIGASE 著者 Favini-Stabile, S, Contreras-Martel, C, Thielens, N, Dessen, A. 登録日 2013-06-20 公開日 2013-07-17 最終更新日 2013-12-18 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Mreb and Murg as Scaffolds for the Cytoplasmic Steps of Peptidoglycan Biosynthesis Environ.Microbiol., 15, 2013

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