PDB: 35140 件ウェブページステータス検索Chemie searchBIRD

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5R9S	PanDDA analysis group deposition Form1 MAP kinase p38-alpha -- Fragment N13470a in complex with MAP kinase p38-alpha 分子名称: 5-(4-chlorophenyl)furan-2-carbohydrazide, CHLORIDE ION, DIMETHYL SULFOXIDE, ... 著者 De Nicola, G.F, Nichols, C.E. 登録日 2020-03-04 公開日 2020-07-22 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Mining the PDB for Tractable Cases Where X-ray Crystallography Combined with Fragment Screens Can Be Used to Systematically Design Protein-Protein Inhibitors: Two Test Cases Illustrated by IL1 beta-IL1R and p38 alpha-TAB1 Complexes. J.Med.Chem., 63, 2020
8BYW	Rut B structure 分子名称: Ureidoacrylate amidohydrolase RutB 著者 Rajendran, C, Sterner, R, Busch, M. 登録日 2022-12-14 公開日 2023-01-25 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.59 Å) 主引用文献 Structural and Functional Characterization of the Ureidoacrylate Amidohydrolase RutB from Escherichia coli . Biochemistry, 62, 2023
5HOG	Crystal structure of the carboxy-terminal domain of yeast Ctf4 bound to Dna2. 分子名称: DNA polymerase alpha-binding protein, Dna2p 著者 Simon, A.C, Pellegrini, L. 登録日 2016-01-19 公開日 2016-06-22 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (3.092 Å) 主引用文献 Ctf4 Is a Hub in the Eukaryotic Replisome that Links Multiple CIP-Box Proteins to the CMG Helicase. Mol.Cell, 63, 2016
5HYM	3-Hydroxybenzoate 6-hydroxylase from Rhodococcus jostii in complex with phosphatidylinositol 分子名称: CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, Phosphatidylinositol, ... 著者 Orru, R, Montersino, S, Mattevi, A, van Berkel, W.J.H. 登録日 2016-02-01 公開日 2017-02-01 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 3-Hydroxybenzoate 6-Hydroxylase from Rhodococcus jostii RHA1 Contains a Phosphatidylinositol Cofactor. Front Microbiol, 8, 2017
8CEO	Yeast RNA polymerase II transcription pre-initiation complex with core Mediator and the +1 nucleosome 分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ... 著者 Wang, H, Cramer, P. 登録日 2023-02-02 公開日 2023-03-08 最終更新日 2023-04-19 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Yeast PIC-Mediator structure with RNA polymerase II C-terminal domain. Proc.Natl.Acad.Sci.USA, 120, 2023
1B49	DCMP HYDROXYMETHYLASE FROM T4 (PHOSPHATE-BOUND) 分子名称: PHOSPHATE ION, PROTEIN (DEOXYCYTIDYLATE HYDROXYMETHYLASE) 著者 Song, H.K, Sohn, S.H, Suh, S.W. 登録日 1999-01-06 公開日 1999-01-13 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Crystal structure of deoxycytidylate hydroxymethylase from bacteriophage T4, a component of the deoxyribonucleoside triphosphate-synthesizing complex. EMBO J., 18, 1999
6ER6	Crystal structure of a computationally designed colicin endonuclease and immunity pair colEdes7/Imdes7 分子名称: Endonuclease colEdes7, immunity Imdes7 著者 Netzer, R, Listov, D, Dym, O, Albeck, S, Knop, O, Fleishman, S.J. 登録日 2017-10-17 公開日 2019-01-30 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Ultrahigh specificity in a network of computationally designed protein-interaction pairs. Nat Commun, 9, 2018
6ULC	Structure of full-length, fully glycosylated, non-modified HIV-1 gp160 bound to PG16 Fab at a nominal resolution of 4.6 Angstrom 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Pan, J, Chen, B, Harrison, S.C. 登録日 2019-10-07 公開日 2020-04-29 最終更新日 2020-09-09 実験手法 ELECTRON MICROSCOPY (4.6 Å) 主引用文献 Cryo-EM Structure of Full-length HIV-1 Env Bound With the Fab of Antibody PG16. J.Mol.Biol., 432, 2020
5I2Y	Crystal Structure of TPP1 K170A 分子名称: Adrenocortical dysplasia protein homolog 著者 Nandakumar, J, Smith, E.M. 登録日 2016-02-09 公開日 2016-11-09 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Structural and functional consequences of a disease mutation in the telomere protein TPP1. Proc.Natl.Acad.Sci.USA, 113, 2016
5I2X	Crystal Structure of TPP1 K170del 分子名称: Adrenocortical dysplasia protein homolog 著者 Nandakumar, J, Smith, E. 登録日 2016-02-09 公開日 2016-11-09 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Structural and functional consequences of a disease mutation in the telomere protein TPP1. Proc.Natl.Acad.Sci.USA, 113, 2016
8CH6	Structure of a late-stage activated spliceosome (BAqr) arrested with a dominant-negative Aquarius mutant (state B complex). 分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, BUD13 homolog, Cell division cycle 5-like protein, ... 著者 Cretu, C, Schmitzova, J, Pena, V. 登録日 2023-02-07 公開日 2023-05-10 最終更新日 2023-06-14 実験手法 ELECTRON MICROSCOPY (5.9 Å) 主引用文献 Structural basis of catalytic activation in human splicing. Nature, 617, 2023
5IP4	X-RAY STRUCTURE OF THE C-TERMINAL DOMAIN OF HUMAN DOUBLECORTIN 分子名称: Neuronal migration protein doublecortin, XA4551 NANOBODY AGAINST C-DCX 著者 Ruf, A, Benz, J, Burger, D, D'Arcy, B, Debulpaep, M, Di Lello, P, Fry, D, Huber, W, Kremer, T, Laeremans, T, Matile, H, Ross, A, Rudolph, M.G, Rufer, A.C, Sharma, A, Steinmetz, M.O, Steyaert, J, Schoch, G, Stihle, M, Thoma, R. 登録日 2016-03-09 公開日 2016-05-18 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.81 Å) 主引用文献 Crystal Structures of the Human Doublecortin C- and N-terminal Domains in Complex with Specific Antibodies. J.Biol.Chem., 291, 2016
3HHR	HUMAN GROWTH HORMONE AND EXTRACELLULAR DOMAIN OF ITS RECEPTOR: CRYSTAL STRUCTURE OF THE COMPLEX 分子名称: HUMAN GROWTH HORMONE, HUMAN GROWTH HORMONE RECEPTOR (hGHbp) 著者 De Vos, A.M, Ultsch, M, Kossiakoff, A.A. 登録日 1993-12-30 公開日 1994-04-30 最終更新日 2024-06-05 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Human growth hormone and extracellular domain of its receptor: crystal structure of the complex. Science, 255, 1992
5IO9	X-RAY STRUCTURE OF THE N-TERMINAL DOMAIN OF HUMAN DOUBLECORTIN 分子名称: Neuronal migration protein doublecortin 著者 Ruf, A, Benz, J, Burger, D, D'Arcy, B, Debulpaep, M, Di Lello, P, Fry, D, Huber, W, Kremer, T, Laeremans, T, Matile, H, Ross, A, Rudolph, M.G, Rufer, A.C, Sharma, A, Steinmetz, M.O, Steyaert, J, Schoch, G, Stihle, M, Thoma, R. 登録日 2016-03-08 公開日 2016-03-23 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 Crystal Structures of the Human Doublecortin C- and N-terminal Domains in Complex with Specific Antibodies. J.Biol.Chem., 291, 2016
8CHB	Inward-facing conformation of the ABC transporter BmrA C436S/A582C cross-linked mutant 分子名称: Multidrug resistance ABC transporter ATP-binding/permease protein BmrA 著者 Di Cesare, M, Kaplan, E, Hanssen, E, Valimehr, S, Orelle, C, Jault, J.M. 登録日 2023-02-07 公開日 2023-12-20 最終更新日 2024-01-24 実験手法 ELECTRON MICROSCOPY (3.14 Å) 主引用文献 The transport activity of the multidrug ABC transporter BmrA does not require a wide separation of the nucleotide-binding domains. J.Biol.Chem., 300, 2023
9BEZ	MID domain of human Argo2 bound to RNA 分子名称: Protein argonaute-2, [(3~{S},4~{R},5~{R})-5-[5-methyl-2,4-bis(oxidanylidene)pyrimidin-1-yl]-4-oxidanyl-oxolan-3-yl] [oxidanyl(phosphonooxy)phosphoryl] hydrogen phosphate 著者 Harp, J.M, Egli, M. 登録日 2024-04-16 公開日 2024-07-10 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structure and Stability of Ago2 MID-Nucleotide Complexes: All-in-One (Drop) His 6 -SUMO Tag Removal, Nucleotide Binding, and Crystal Growth. Curr Protoc, 4, 2024
6UBH	Structure of the MM7 Erbin PDZ variant in complex with a high-affinity peptide 分子名称: Erbin, SODIUM ION, peptide 著者 Singer, A.U, Teyra, J, McLaughlin, M, Ernst, A, Sicheri, F, Sidhu, S.S. 登録日 2019-09-11 公開日 2020-07-29 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Comprehensive Assessment of the Relationship Between Site -2 Specificity and Helix alpha 2 in the Erbin PDZ Domain. J.Mol.Biol., 433, 2021
5IKC	X-RAY STRUCTURE OF THE N-TERMINAL DOMAIN OF HUMAN DOUBLECORTIN in complex with FAB 分子名称: CHLORIDE ION, Ighg protein, MAb 6H10 light chain, ... 著者 Ruf, A, Stihle, M, Benz, J, Thoma, R, Rudolph, M.G. 登録日 2016-03-03 公開日 2016-05-18 最終更新日 2020-03-11 実験手法 X-RAY DIFFRACTION (2.06 Å) 主引用文献 Crystal Structures of the Human Doublecortin C- and N-terminal Domains in Complex with Specific Antibodies. J.Biol.Chem., 291, 2016
8CD3	Crystal structure of human Scribble PDZ1 domain in complex with human TMIGD1 分子名称: Protein scribble homolog, Transmembrane and immunoglobulin domain-containing protein 1 著者 Maddumage, J.C, Kvansakul, M. 登録日 2023-01-30 公開日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Membrane recruitment of the polarity protein Scribble by the cell adhesion receptor TMIGD1. Commun Biol, 6, 2023
6UUQ	Structure of Calcineurin bound to RCAN1 分子名称: Calcipressin-1, FE (III) ION, PHOSPHATE ION, ... 著者 Sheftic, S, Page, R, Peti, W. 登録日 2019-10-31 公開日 2020-09-09 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.849 Å) 主引用文献 The structure of the RCAN1:CN complex explains the inhibition of and substrate recruitment by calcineurin. Sci Adv, 6, 2020
5IRR	Crystal structure of Septin GTPase domain from Chlamydomonas reinhardtii 分子名称: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, MAGNESIUM ION, Septin-like protein 著者 Pinto, A.P.A, Pereira, H.M, Navarro, M.V.A.S, Brandao-Neto, J, Garratt, R.C, Araujo, A.P.U. 登録日 2016-03-14 公開日 2017-04-26 最終更新日 2020-01-01 実験手法 X-RAY DIFFRACTION (2.04 Å) 主引用文献 Filaments and fingers: Novel structural aspects of the single septin from Chlamydomonas reinhardtii. J. Biol. Chem., 292, 2017
8CDT	Crystal structure of the xNup93-Nb2t VHH antibody 分子名称: 15-Nup93 tracking VHH antibody, GLYCEROL 著者 Guttler, T, Colom, M.S, Gorlich, D. 登録日 2023-02-01 公開日 2024-02-21 最終更新日 2024-06-12 実験手法 X-RAY DIFFRACTION (1.41 Å) 主引用文献 A checkpoint function for Nup98 in nuclear pore formation suggested by novel inhibitory nanobodies. Embo J., 43, 2024
8CEX	Structure of the mouse 8-oxoguanine DNA Glycosylase mOGG1 in complex with ligand TH11227 分子名称: 6-fluoranyl-N-[(4-methylphenyl)methyl]pyridine-3-carboxamide, N-glycosylase/DNA lyase, NICKEL (II) ION 著者 Kosenina, S, Scaletti, E.R, Stenmark, P. 登録日 2023-02-02 公開日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structure of the mouse 8-oxoguanine DNA Glycosylase mOGG1 in complex with ligand TH11227 To Be Published
5IN7	X-RAY STRUCTURE OF THE N-TERMINAL DOMAIN OF HUMAN DOUBLECORTIN 分子名称: Neuronal migration protein doublecortin 著者 Ruf, A, Benz, J, Burger, D, D'Arcy, B, Debulpaep, M, Di Lello, P, Fry, D, Huber, W, Kremer, T, Laeremans, T, Matile, H, Ross, A, Rudolph, M.G, Rufer, A.C, Sharma, A, Steinmetz, M.O, Steyaert, J, Schoch, G, Stihle, M, Thoma, R. 登録日 2016-03-07 公開日 2016-03-23 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.48 Å) 主引用文献 Crystal Structures of the Human Doublecortin C- and N-terminal Domains in Complex with Specific Antibodies. J.Biol.Chem., 291, 2016
5I2C	Arginine-bound CASTOR1 from Homo sapiens 分子名称: ACETATE ION, ARGININE, GATS-like protein 3 著者 Saxton, R.A, Knockenhauer, K.E, Schwartz, T.U. 登録日 2016-02-08 公開日 2016-08-10 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (1.801 Å) 主引用文献 Mechanism of arginine sensing by CASTOR1 upstream of mTORC1. Nature, 536, 2016

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