PDB: 10970 件ウェブページステータス検索Chemie searchBIRD

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5KYM	Crystal Structure of the 1-acyl-sn-glycerophosphate (LPA) acyltransferase, PlsC, from Thermotoga maritima 分子名称: 1-HEPTADECANOYL-2-TRIDECANOYL-3-GLYCEROL-PHOSPHONYL CHOLINE, 1-acyl-sn-glycerol-3-phosphate acyltransferase, DODECYL-BETA-D-MALTOSIDE, ... 著者 Robertson, R.M, Yao, J, Gajewski, S, Kumar, G, Martin, E.W, Rock, C.O, White, S.W. 登録日 2016-07-21 公開日 2017-07-26 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 A two-helix motif positions the lysophosphatidic acid acyltransferase active site for catalysis within the membrane bilayer. Nat. Struct. Mol. Biol., 24, 2017
3HYI	Crystal structure of full-length DUF199/WhiA from Thermatoga maritima 分子名称: GLYCEROL, Protein DUF199/WhiA, SODIUM ION 著者 Kaiser, B.K, Clifton, M.C, Shen, B.W, Stoddard, B.L. 登録日 2009-06-22 公開日 2009-09-01 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.34 Å) 主引用文献 The structure of a bacterial DUF199/WhiA protein: domestication of an invasive endonuclease Structure, 17, 2009
5L6Z	Crystal structure of D62A mutant of Thermotoga maritima TmPEP1050 aminopeptidase 分子名称: CITRIC ACID, SODIUM ION, leucylaminopeptidase 著者 Dutoit, R, Van Elder, D, Bauvois, C. 登録日 2016-06-01 公開日 2017-06-21 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.501 Å) 主引用文献 M42 aminopeptidase catalytic site: the structural and functional role of a strictly conserved aspartate residue Proteins, 2020
4JPB	The structure of a ternary complex between CheA domains P4 and P5 with CheW and with an unzipped fragment of TM14, a chemoreceptor analog from Thermotoga maritima. 分子名称: Chemotaxis protein CheA, Chemotaxis protein CheW, Methyl-accepting chemotaxis protein 著者 Li, X, Bayas, C, Bilwes, A.M, Crane, B.R. 登録日 2013-03-19 公開日 2013-08-28 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (3.186 Å) 主引用文献 The 3.2 angstrom resolution structure of a receptor: CheA:CheW signaling complex defines overlapping binding sites and key residue interactions within bacterial chemosensory arrays. Biochemistry, 52, 2013
7PU4	Crystal structure of the dimer RBP-N and RBP-Trunc from Thermotoga maritima Ribose Binding Protein 分子名称: Ribose ABC transporter, periplasmic ribose-binding protein 著者 Romero-Romero, S, Michel, F, Hocker, B. 登録日 2021-09-28 公開日 2023-03-08 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.69 Å) 主引用文献 Retracing the evolution of a modern periplasmic binding protein. Protein Sci., 2023
5UAO	Crystal structure of MibH, a lathipeptide tryptophan 5-halogenase 分子名称: CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, Tryptophane-5-halogenase 著者 Cogan, D.P, Nair, S.K. 登録日 2016-12-19 公開日 2017-01-25 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.88 Å) 主引用文献 Two Flavoenzymes Catalyze the Post-Translational Generation of 5-Chlorotryptophan and 2-Aminovinyl-Cysteine during NAI-107 Biosynthesis. ACS Chem. Biol., 12, 2017
8Y7F	Crystal structure of CARF domain-truncated Csx1-Crn2 from Marinitoga sp. 分子名称: CRISPR-associated protein 著者 Zhang, D, Yuan, C, Lin, Z. 登録日 2024-02-04 公開日 2024-07-17 実験手法 X-RAY DIFFRACTION (2.95 Å) 主引用文献 Structural insight into the Csx1-Crn2 fusion self-limiting ribonuclease of type III CRISPR system. Nucleic Acids Res., 2024
8Y6Z	Crystal structure of the Marinitoga sp. Csx1-Crn2 fusion ribonuclease of type III CRISPR 分子名称: CRISPR-associated protein 著者 Zhang, D, Yuan, C. 登録日 2024-02-03 公開日 2024-07-17 実験手法 X-RAY DIFFRACTION (3.65 Å) 主引用文献 Structural insight into the Csx1-Crn2 fusion self-limiting ribonuclease of type III CRISPR system. Nucleic Acids Res., 2024
8Y7G	Crystal structure of the Marinitoga sp. Csx1-Crn2 H495A mutant in complex with cyclic-tetraadenylate (cA4) 分子名称: ACETATE ION, CRISPR-associated protein, RNA (5'-R(P*AP*A)-3'), ... 著者 Zhang, D, Yuan, C, Lin, Z. 登録日 2024-02-04 公開日 2024-07-17 実験手法 X-RAY DIFFRACTION (3.15 Å) 主引用文献 Structural insight into the Csx1-Crn2 fusion self-limiting ribonuclease of type III CRISPR system. Nucleic Acids Res., 2024
8Y75	Crystal structure of the CARF-HTH domain of Csx1-Crn2 from Marinitoga sp. 分子名称: CRISPR-associated protein 著者 Zhang, D, Yuan, C, Lin, Z. 登録日 2024-02-03 公開日 2024-07-17 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structural insight into the Csx1-Crn2 fusion self-limiting ribonuclease of type III CRISPR system. Nucleic Acids Res., 2024
7QSQ	Permutated N-terminal lobe of the ribose binding protein from Thermotoga maritima 分子名称: 1,2-ETHANEDIOL, Ribose ABC transporter, periplasmic ribose-binding protein, ... 著者 Shanmugaratnam, S, Michel, F, Hocker, B. 登録日 2022-01-14 公開日 2023-01-11 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.79 Å) 主引用文献 Structures of permuted halves of a modern ribose-binding protein. Acta Crystallogr D Struct Biol, 79, 2023
7QSP	Permutated C-terminal lobe of the ribose binding protein from Thermotoga maritima 分子名称: 1,2-ETHANEDIOL, Ribose ABC transporter, periplasmic ribose-binding protein 著者 Shanmugaratnam, S, Michel, F, Hocker, B. 登録日 2022-01-14 公開日 2023-01-11 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.36 Å) 主引用文献 Structures of permuted halves of a modern ribose-binding protein. Acta Crystallogr D Struct Biol, 79, 2023
6GWG	Alpha-galactosidase from Thermotoga maritima in complex with cyclohexene-based carbasugar mimic of galactose covalently linked to the nucleophile 分子名称: (1~{S},2~{S},3~{S})-3-fluoranyl-6-(hydroxymethyl)cyclohex-5-ene-1,2,4-triol, Alpha-galactosidase, GLYCEROL, ... 著者 Gloster, T.M, Oehler, V. 登録日 2018-06-24 公開日 2018-08-22 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.77 Å) 主引用文献 Revealing the mechanism for covalent inhibition of glycoside hydrolases by carbasugars at an atomic level. Nat Commun, 9, 2018
3PG8	Truncated form of 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase from Thermotoga maritima 分子名称: AZIDE ION, GLYCEROL, Phospho-2-dehydro-3-deoxyheptonate aldolase 著者 Cross, P.J, Dobson, R.C.J, Patchett, M.L, Parker, E.J. 登録日 2010-10-31 公開日 2011-01-26 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Tyrosine latching of a regulatory gate affords allosteric control of aromatic amino acid biosynthesis J.Biol.Chem., 286, 2011
6GVD	Alpha-galactosidase from Thermotoga maritima in complex with cyclohexene-based carbasugar mimic of galactose 分子名称: (1~{S},2~{S},3~{S},4~{S})-5-(hydroxymethyl)cyclohex-5-ene-1,2,3,4-tetrol, Alpha-galactosidase, MAGNESIUM ION, ... 著者 Gloster, T.M, Pengelly, R.J. 登録日 2018-06-20 公開日 2018-08-22 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.22 Å) 主引用文献 Revealing the mechanism for covalent inhibition of glycoside hydrolases by carbasugars at an atomic level. Nat Commun, 9, 2018
6GWF	Alpha-galactosidase mutant D387A from Thermotoga maritima in complex with intact cyclohexene-based carbasugar mimic of galactose with 2,4-dinitro leaving group 分子名称: (1~{S},2~{S},5~{S},6~{R})-5-(2,4-dinitrophenoxy)-6-fluoranyl-3-(hydroxymethyl)cyclohex-3-ene-1,2-diol, Alpha-galactosidase, MAGNESIUM ION, ... 著者 Gloster, T.M, Oehler, V. 登録日 2018-06-24 公開日 2018-08-22 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.72 Å) 主引用文献 Revealing the mechanism for covalent inhibition of glycoside hydrolases by carbasugars at an atomic level. Nat Commun, 9, 2018
3DFY	Crystal structure of apo dipeptide epimerase from Thermotoga maritima 分子名称: MAGNESIUM ION, Muconate cycloisomerase 著者 Fedorov, A.A, Fedorov, E.V, Imker, H.J, Gerlt, J.A, Almo, S.C. 登録日 2008-06-12 公開日 2008-11-25 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Discovery of a dipeptide epimerase enzymatic function guided by homology modeling and virtual screening. Structure, 16, 2008
2PLM	Crystal structure of the protein TM0936 from Thermotoga maritima complexed with ZN and S-inosylhomocysteine 分子名称: (2S)-2-AMINO-4-({[(2S,3S,4R,5R)-3,4-DIHYDROXY-5-(6-OXO-1,6-DIHYDRO-9H-PURIN-9-YL)TETRAHYDROFURAN-2-YL]METHYL}THIO)BUTANOIC ACID, Uncharacterized protein, ZINC ION 著者 Fedorov, A.A, Fedorov, E.V, Hermann, J.C, Marti-Arbona, R, Shoichet, B.K, Raushel, F.M, Almo, S.C. 登録日 2007-04-20 公開日 2007-07-17 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structure-based activity prediction for an enzyme of unknown function Nature, 448, 2007
6GTA	Alpha-galactosidase mutant D378A from Thermotoga maritima in complex with intact cyclohexene-based carbasugar mimic of galactose with 3,5 difluorophenyl leaving group 分子名称: (1~{R},2~{S},3~{S},6~{S})-6-[3,5-bis(fluoranyl)phenoxy]-4-(hydroxymethyl)cyclohex-4-ene-1,2,3-triol, Alpha-galactosidase, MAGNESIUM ION, ... 著者 Gloster, T.M, Pengelly, R.J. 登録日 2018-06-17 公開日 2018-08-22 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Revealing the mechanism for covalent inhibition of glycoside hydrolases by carbasugars at an atomic level. Nat Commun, 9, 2018
6GX8	Alpha-galactosidase from Thermotoga maritima in complex with hydrolysed cyclohexene-based carbasugar mimic of galactose 分子名称: (1~{S},2~{S},3~{S},4~{S})-3-fluoranyl-6-(hydroxymethyl)cyclohex-5-ene-1,2,4-triol, Alpha-galactosidase, GLYCEROL, ... 著者 Gloster, T.M, Oehler, V. 登録日 2018-06-26 公開日 2018-08-22 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.42 Å) 主引用文献 Revealing the mechanism for covalent inhibition of glycoside hydrolases by carbasugars at an atomic level. Nat Commun, 9, 2018
2Q8U	CRYSTAL STRUCTURE OF MRE11 FROM THERMOTOGA MARITIMA MSB8 (TM1635) AT 2.20 A RESOLUTION 分子名称: Exonuclease, putative 著者 Joint Center for Structural Genomics (JCSG) 登録日 2007-06-11 公開日 2007-06-26 最終更新日 2023-01-25 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Crystal structure of the first eubacterial Mre11 nuclease reveals novel features that may discriminate substrates during DNA repair. J.Mol.Biol., 397, 2010
2J7C	Beta-glucosidase from Thermotoga maritima in complex with phenylaminomethyl-derived glucoimidazole 分子名称: (5R,6R,7S,8S)-3-(ANILINOMETHYL)-5,6,7,8-TETRAHYDRO-5-(HYDROXYMETHYL)-IMIDAZO[1,2-A]PYRIDINE-6,7,8-TRIOL, ACETATE ION, BETA-GLUCOSIDASE A, ... 著者 Gloster, T.M, Zechel, D, Vasella, A, Davies, G.J. 登録日 2006-10-06 公開日 2006-10-17 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.09 Å) 主引用文献 Glycosidase Inhibition: An Assessment of the Binding of 18 Putative Transition-State Mimics. J.Am.Chem.Soc., 129, 2007
2J7F	Beta-glucosidase from Thermotoga maritima in complex with carboxylate- substituted glucoimidazole 分子名称: ACETATE ION, BETA-GLUCOSIDASE A, CALCIUM ION, ... 著者 Gloster, T.M, Zechel, D, Vasella, A, Davies, G.J. 登録日 2006-10-07 公開日 2006-10-18 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.28 Å) 主引用文献 Glycosidase Inhibition: An Assessment of the Binding of 18 Putative Transition-State Mimics. J.Am.Chem.Soc., 129, 2007
2J7D	Beta-glucosidase from Thermotoga maritima in complex with methoxycarbonyl-substituted glucoimidazole 分子名称: ACETATE ION, BETA-GLUCOSIDASE A, CALCIUM ION, ... 著者 Gloster, T.M, Zechel, D, Vasella, A, Davies, G.J. 登録日 2006-10-06 公開日 2006-10-18 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.24 Å) 主引用文献 Glycosidase Inhibition: An Assessment of the Binding of 18 Putative Transition-State Mimics. J.Am.Chem.Soc., 129, 2007
2J7G	Beta-glucosidase from Thermotoga maritima in complex with methyl acetic acid-substituted glucoimidazole 分子名称: ACETATE ION, BETA-GLUCOSIDASE A, CALCIUM ION, ... 著者 Gloster, T.M, Zechel, D, Vasella, A, Davies, G.J. 登録日 2006-10-07 公開日 2006-10-18 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.91 Å) 主引用文献 Glycosidase Inhibition: An Assessment of the Binding of 18 Putative Transition-State Mimics. J.Am.Chem.Soc., 129, 2007

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