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8IR3
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BU of 8ir3 by Molmil
human nuclear pre-60S ribosomal particle - State B'
分子名称: 28S rRNA, 5.8S rRNA, 5S RNA, ...
著者Zhang, Y, Gao, N.
登録日2023-03-17
公開日2023-08-09
最終更新日2023-11-15
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Visualizing the nucleoplasmic maturation of human pre-60S ribosomal particles.
Cell Res., 33, 2023
8I5C
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BU of 8i5c by Molmil
Crystal structure of a TCR in complex with HLA-A*11:01 bound to KRAS peptide (VVGAVGVGK)
分子名称: Beta-2-microglobulin, MHC class I antigen (Fragment), TCR alpha chain, ...
著者Lu, D, Chen, Y, Jiang, M, Tan, S.G, Chai, Y, Gao, G.F.
登録日2023-01-24
公開日2023-08-23
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (3.34 Å)
主引用文献Crystal structure of a TCR in complex with HLA-A*11:01 bound to KRAS peptide (VVGAVGVGK)
Nat Commun, 2023
8IDT
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BU of 8idt by Molmil
human nuclear pre-60S ribosomal particle - State G
分子名称: 28S rRNA, 5.8S rRNA, 5S rRNA, ...
著者Zhang, Y, Gao, N.
登録日2023-02-14
公開日2023-08-09
最終更新日2023-11-15
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Visualizing the nucleoplasmic maturation of human pre-60S ribosomal particles.
Cell Res., 33, 2023
4GGF
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BU of 4ggf by Molmil
Crystal structure of Mn2+ bound calprotectin
分子名称: CALCIUM ION, GLYCEROL, MANGANESE (II) ION, ...
著者Damo, S.M, Fritz, G.
登録日2012-08-06
公開日2013-02-20
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Molecular basis for manganese sequestration by calprotectin and roles in the innate immune response to invading bacterial pathogens.
Proc.Natl.Acad.Sci.USA, 110, 2013
3D4V
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BU of 3d4v by Molmil
Crystal Structure of an AlkA Host/Guest Complex N7MethylGuanine:Cytosine Base Pair
分子名称: 5'-D(*DGP*DAP*DCP*DAP*DTP*DGP*DAP*(FMG)P*DTP*DGP*DCP*DC)-3', 5'-D(*DGP*DGP*DCP*DAP*DCP*DTP*DCP*DAP*DTP*DGP*DTP*DC)-3', DNA-3-methyladenine glycosylase 2
著者Lee, S, Bowman, B.R, Wang, S, Verdine, G.L.
登録日2008-05-15
公開日2008-09-09
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Synthesis and structure of duplex DNA containing the genotoxic nucleobase lesion N7-methylguanine.
J.Am.Chem.Soc., 130, 2008
8IR1
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BU of 8ir1 by Molmil
human nuclear pre-60S ribosomal particle - State A
分子名称: 28S rRNA, 5.8S rRMA, 5S RNA, ...
著者Zhang, Y, Gao, N.
登録日2023-03-17
公開日2023-08-09
最終更新日2023-11-15
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Visualizing the nucleoplasmic maturation of human pre-60S ribosomal particles.
Cell Res., 33, 2023
8IJW
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BU of 8ijw by Molmil
Cryo-EM structure of the gastric proton pump with bound DQ-06
分子名称: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL, ...
著者Abe, K, Yokoshima, S, Yoshimori, A.
登録日2023-02-28
公開日2023-08-30
最終更新日2023-10-04
実験手法ELECTRON MICROSCOPY (2.19 Å)
主引用文献Deep learning driven de novo drug design based on gastric proton pump structures.
Commun Biol, 6, 2023
8IJX
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BU of 8ijx by Molmil
Cryo-EM structure of the gastric proton pump with bound DQ-18
分子名称: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1-[4-[(5-chloranyl-2-phenylmethoxy-phenyl)methoxy]phenyl]-N-methyl-methanamine, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Abe, K, Yokoshima, S, Yoshimori, A.
登録日2023-02-28
公開日2023-08-30
最終更新日2023-10-04
実験手法ELECTRON MICROSCOPY (2.08 Å)
主引用文献Deep learning driven de novo drug design based on gastric proton pump structures.
Commun Biol, 6, 2023
8IMY
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BU of 8imy by Molmil
Cryo-EM structure of GPI-T (inactive mutant) with GPI and proULBP2, a proprotein substrate
分子名称: 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Li, T, Xu, Y, Qu, Q, Li, D.
登録日2023-03-07
公開日2023-08-16
最終更新日2023-11-01
実験手法ELECTRON MICROSCOPY (3.22 Å)
主引用文献Structures of liganded glycosylphosphatidylinositol transamidase illuminate GPI-AP biogenesis.
Nat Commun, 14, 2023
8IQ0
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BU of 8iq0 by Molmil
Crystal structure of hydrogen sulfide-bound superoxide dismutase in oxidized state
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, COPPER (II) ION, ...
著者Zhou, J.H, Huang, W.X, Cheng, R.X, Zhang, P.J, Zhu, Y.C.
登録日2023-03-15
公開日2023-09-06
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Hydrogen sulfide functions as a micro-modulator bound at the copper active site of Cu/Zn-SOD to regulate the catalytic activity of the enzyme.
Cell Rep, 42, 2023
8IJV
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BU of 8ijv by Molmil
Cryo-EM structure of the gastric proton pump with bound DQ-02
分子名称: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-[[5-chloranyl-2-(4-chlorophenyl)phenyl]methoxy]-N-methyl-but-2-yn-1-amine, ...
著者Abe, K, Yokoshima, S, Yoshimori, A.
登録日2023-02-28
公開日2023-08-30
最終更新日2023-10-04
実験手法ELECTRON MICROSCOPY (2.1 Å)
主引用文献Deep learning driven de novo drug design based on gastric proton pump structures.
Commun Biol, 6, 2023
8IFY
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BU of 8ify by Molmil
Cryo-EM structure of SARS-CoV-2 Omicron BA.4/5 spike protein in complex with white-tailed deer ACE2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme, ...
著者Han, P, Meng, Y.M, Qi, J.X.
登録日2023-02-20
公開日2023-08-30
最終更新日2023-10-25
実験手法ELECTRON MICROSCOPY (2.55 Å)
主引用文献Structural basis of white-tailed deer, Odocoileus virginianus , ACE2 recognizing all the SARS-CoV-2 variants of concern with high affinity.
J.Virol., 97, 2023
3CX5
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BU of 3cx5 by Molmil
Structure of complex III with bound cytochrome c in reduced state and definition of a minimal core interface for electron transfer.
分子名称: (1R)-2-(dodecanoyloxy)-1-[(phosphonooxy)methyl]ethyl tetradecanoate, (1R)-2-(phosphonooxy)-1-[(tridecanoyloxy)methyl]ethyl pentadecanoate, (1R)-2-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-1-[(heptanoyloxy)methyl]ethyl octadecanoate, ...
著者Solmaz, S.R.N, Hunte, C.
登録日2008-04-23
公開日2008-05-13
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure of complex III with bound cytochrome c in reduced state and definition of a minimal core interface for electron transfer.
J.Biol.Chem., 283, 2008
8IQ1
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BU of 8iq1 by Molmil
Crystal structure of hydrogen sulfide-bound superoxide dismutase in reduced state
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, COPPER (II) ION, ...
著者Zhou, J.H, Huang, W.X, Cheng, R.X, Zhang, P.J, Zhu, Y.C.
登録日2023-03-15
公開日2023-09-06
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Hydrogen sulfide functions as a micro-modulator bound at the copper active site of Cu/Zn-SOD to regulate the catalytic activity of the enzyme.
Cell Rep, 42, 2023
8I98
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BU of 8i98 by Molmil
Crystal structure of TePixD Y8F
分子名称: FLAVIN MONONUCLEOTIDE, Tll0078 protein
著者Hu, R, Lin, L, Lu, Q.
登録日2023-02-06
公開日2023-09-20
実験手法X-RAY DIFFRACTION (2.54 Å)
主引用文献Structure of the BLUF Protein TePixD Y8F Mutant
Progress in Biochemistry and Biophysics, 2023
8I91
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BU of 8i91 by Molmil
ACE2-SIT1 complex bound with proline
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, ...
著者Li, Y.N, Zhang, Y.Y, Shen, Y.P, Yan, R.H.
登録日2023-02-06
公開日2023-09-27
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structural insight into the substrate recognition and transport mechanism of amino acid transporter complex ACE2-B 0 AT1 and ACE2-SIT1.
Cell Discov, 9, 2023
8I4T
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BU of 8i4t by Molmil
Structure of the asymmetric unit of SFTSV virion
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelopment polyprotein
著者Du, S, Peng, R, Qi, J, Li, C.
登録日2023-01-21
公開日2023-09-13
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (5.2 Å)
主引用文献Cryo-EM structure of severe fever with thrombocytopenia syndrome virus.
Nat Commun, 14, 2023
6ED9
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BU of 6ed9 by Molmil
NMR structure for Sp1 transcription factor duplex 5'-d(TGGGCGGGA)
分子名称: DNA (5'-D(*TP*CP*CP*CP*GP*CP*CP*CP*A)-3'), DNA (5'-D(*TP*GP*GP*GP*CP*GP*GP*GP*A)-3')
著者Davis, E.V, Hennig, M, Arya, D.P.
登録日2018-08-09
公開日2019-08-14
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献An NMR Structure Determination and Analysis of Four Sp1 Consensus Sequences
To Be Published
8IMK
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BU of 8imk by Molmil
D3-D4, D1-D2, D'3-D'4, D'1-D'2 cylinder in cyanobacterial phycobilisome from Anthocerotibacter panamensis (Cluster C)
分子名称: ApcA1, ApcA2, ApcB1, ...
著者Wang, C.H, Yang, C.H, Wu, H.Y, Jiang, H.W, Ho, M.C, Ho, M.Y.
登録日2023-03-07
公開日2023-10-25
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (2.48 Å)
主引用文献A structure of the relict phycobilisome from a thylakoid-free cyanobacterium.
Nat Commun, 14, 2023
8IMJ
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BU of 8imj by Molmil
A'1-A'2, A'3-A'4, B1-B2, C1-C2 cylinder in cyanobacterial phycobilisome from Anthocerotibacter panamensis (Cluster B)
分子名称: ApcA2, ApcB2, ApcB3, ...
著者Wang, C.H, Yang, C.H, Wu, H.Y, Jiang, H.W, Ho, M.C, Ho, M.Y.
登録日2023-03-07
公開日2023-10-25
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (2.59 Å)
主引用文献A structure of the relict phycobilisome from a thylakoid-free cyanobacterium.
Nat Commun, 14, 2023
3DBY
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BU of 3dby by Molmil
Crystal structure of uncharacterized protein from Bacillus cereus G9241 (CSAP Target)
分子名称: 1,2-ETHANEDIOL, FE (III) ION, uncharacterized protein
著者Ramagopal, U.A, Bonanno, J.B, Ozyurt, S, Freeman, J, Wasserman, S, Hu, S, Groshong, C, Rodgers, L, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2008-06-02
公開日2008-07-29
最終更新日2021-02-10
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of uncharacterized protein from Bacillus cereus G9241
To be published
8IMI
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BU of 8imi by Molmil
A1-A2, A3-A4, B'1-B'2, C'1-C'2 cylinder in cyanobacterial phycobilisome from Anthocerotibacter panamensis (Cluster A)
分子名称: ApcA2, ApcB2, ApcB3, ...
著者Wang, C.H, Yang, C.H, Wu, H.Y, Jiang, H.W, Ho, M.C, Ho, M.Y.
登録日2023-03-07
公開日2023-10-25
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (2.59 Å)
主引用文献A structure of the relict phycobilisome from a thylakoid-free cyanobacterium.
Nat Commun, 14, 2023
8IML
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BU of 8iml by Molmil
Rs2I-Rs2II, Rs1I-Rs1II, RbI-RbII cylinder in cyanobacterial phycobilisome from Anthocerotibacter panamensis (Cluster D)
分子名称: CpcA, CpcB, CpcD, ...
著者Wang, C.H, Yang, C.H, Wu, H.Y, Jiang, H.W, Ho, M.C, Ho, M.Y.
登録日2023-03-07
公開日2023-10-25
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (2.74 Å)
主引用文献A structure of the relict phycobilisome from a thylakoid-free cyanobacterium.
Nat Commun, 14, 2023
8IMN
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BU of 8imn by Molmil
Rt1I-Rt1II, Rt2'I-Rt2'II, Rt3I-Rt3II cylinder in cyanobacterial phycobilisome from Anthocerotibacter panamensis (Cluster F)
分子名称: CpcA, CpcB, CpcD, ...
著者Wang, C.H, Yang, C.H, Wu, H.Y, Jiang, H.W, Ho, M.C, Ho, M.Y.
登録日2023-03-07
公開日2023-10-25
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (3.07 Å)
主引用文献A structure of the relict phycobilisome from a thylakoid-free cyanobacterium.
Nat Commun, 14, 2023
8I7O
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BU of 8i7o by Molmil
In situ structure of axonemal doublet microtubules in mouse sperm with 16-nm repeat
分子名称: Cilia and flagella-associated protein 77, Cilia- and flagella-associated protein 20, Cilia- and flagella-associated protein 276, ...
著者Zhu, Y, Yin, G.L, Tai, L.H, Sun, F.
登録日2023-02-01
公開日2023-10-11
最終更新日2023-12-06
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献In-cell structural insight into the stability of sperm microtubule doublet.
Cell Discov, 9, 2023

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件を2024-07-17に公開中

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