PDB: 97310 件ウェブページステータス検索Chemie searchBIRD

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1EET	HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH THE INHIBITOR MSC204 分子名称: 1-(5-BROMO-PYRIDIN-2-YL)-3-[2-(6-FLUORO-2-HYDROXY-3-PROPIONYL-PHENYL)-CYCLOPROPYL]-UREA, HIV-1 REVERSE TRANSCRIPTASE 著者 Hogberg, M, Sahlberg, C, Engelhardt, P, Noreen, R, Kangasmetsa, J, Johansson, N.G, Oberg, B, Vrang, L, Zhang, H, Sahlberg, B.L, Unge, T, Lovgren, S, Fridborg, K, Backbro, K. 登録日 2000-02-03 公開日 2001-02-07 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.73 Å) 主引用文献 Urea-PETT compounds as a new class of HIV-1 reverse transcriptase inhibitors. 3. Synthesis and further structure-activity relationship studies of PETT analogues. J.Med.Chem., 42, 1999
1EHT	THEOPHYLLINE-BINDING RNA IN COMPLEX WITH THEOPHYLLINE, NMR, 10 STRUCTURES 分子名称: THEOPHYLLINE, THEOPHYLLINE-BINDING RNA 著者 Zimmermann, G.R, Pardi, A. 登録日 1997-03-20 公開日 1997-12-24 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Interlocking structural motifs mediate molecular discrimination by a theophylline-binding RNA. Nat.Struct.Biol., 4, 1997
7OLB	Crystal structure of Pab-AGOG, an 8-oxoguanine DNA glycosylase from Pyrococcus abyssi 分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, CITRIC ACID, ... 著者 Coste, F, Goffinont, S, Flament, D, Castaing, B. 登録日 2021-05-19 公開日 2022-06-01 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.1 Å) 主引用文献 Structural and functional determinants of the archaeal 8-oxoguanine-DNA glycosylase AGOG for DNA damage recognition and processing. Nucleic Acids Res., 50, 2022
1EGZ	CELLULASE CEL5 FROM ERWINIA CHRYSANTHEMI, A FAMILY GH 5-2 ENZYME 分子名称: CALCIUM ION, ENDOGLUCANASE Z 著者 Czjzek, M, El Hassouni, M, Py, B, Barras, F. 登録日 1999-03-18 公開日 1999-03-26 最終更新日 2023-08-09 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Type II protein secretion in gram-negative pathogenic bacteria: the study of the structure/secretion relationships of the cellulase Cel5 (formerly EGZ) from Erwinia chrysanthemi J.Mol.Biol., 310, 2001
9FMD	Integrative model of the human post-catalytic spliceosome (P-complex) 分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, ADENOSINE-5'-TRIPHOSPHATE, ATP-dependent RNA helicase DHX8, ... 著者 Rothe, P, Plaschka, C, Vorlaender, M.K. 登録日 2024-06-05 公開日 2024-07-10 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Mechanism for the initiation of spliceosome disassembly. Nature, 2024
4TXD	Crystal structure of Thermofilum pendens Csc2 分子名称: Csc2, ZINC ION 著者 Hrle, A, Conti, E. 登録日 2014-07-03 公開日 2014-08-27 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.818 Å) 主引用文献 Structural analyses of the CRISPR protein Csc2 reveal the RNA-binding interface of the type I-D Cas7 family. Rna Biol., 11, 2014
1ET4	CRYSTAL STRUCTURE OF A VITAMIN B12 BINDING RNA APTAMER WITH LIGAND AT 2.3 A 分子名称: CYANOCOBALAMIN, RNA APTAMER, 35-MER 著者 Sussman, D, Wilson, C. 登録日 2000-04-12 公開日 2000-11-13 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 A water channel in the core of the vitamin B(12) RNA aptamer. Structure Fold.Des., 8, 2000
8G23	Structure of Ternary Complex of cGAS with dsDNA and Bound pppIpA 分子名称: ADENOSINE-5'-TRIPHOSPHATE, Cyclic GMP-AMP synthase, MAGNESIUM ION, ... 著者 Wu, S, Sohn, J. 登録日 2023-02-03 公開日 2024-05-22 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (2.71 Å) 主引用文献 The structural basis for 2'-5'/3'-5'-cGAMP synthesis by cGAS. Nat Commun, 15, 2024
1EAN	THE RUNX1 Runt domain at 1.70A resolution: A structural switch and specifically bound chloride ions modulate DNA binding 分子名称: CHLORIDE ION, RUNT-RELATED TRANSCRIPTION FACTOR 1 著者 Backstrom, S, Wolf-Watz, M, Grundstrom, C, Hard, T, Grundstrom, T, Sauer, U.H. 登録日 2001-07-13 公開日 2002-09-12 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 The Runx1 Runt Domain at 1.25 A Resolution: A Structural Switch and Specifically Bound Chloride Ions Modulate DNA Binding J.Mol.Biol., 322, 2002
4TUS	Human DNA polymerase beta inserting dCMPNPP opposite the 5'G of cisplatin crosslinked Gs (Pt-GG2) WITH MANGANESE IN THE ACTIVE SITE. 分子名称: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]cytidine, Cisplatin, DNA (5'-D(*CP*CP*CP*AP*CP*GP*GP*CP*CP*CP*AP*TP*CP*AP*CP*C)-3'), ... 著者 Koag, M.C, Lee, S. 登録日 2014-06-24 公開日 2014-10-01 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.42 Å) 主引用文献 Structural Basis for the Inefficient Nucleotide Incorporation Opposite Cisplatin-DNA Lesion by Human DNA Polymerase beta. J.Biol.Chem., 289, 2014
1ESD	THE MOLECULAR MECHANISM OF ENANTIORECOGNITION BY ESTERASES 分子名称: ESTERASE, METHYLPHOSPHONIC ACID ESTER GROUP 著者 Wei, Y, Schottel, J.L, Derewenda, U, Swenson, L, Patkar, S, Derewenda, Z.S. 登録日 1994-10-07 公開日 1995-10-15 最終更新日 2024-06-05 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 A novel variant of the catalytic triad in the Streptomyces scabies esterase. Nat.Struct.Biol., 2, 1995
4TUQ	Human DNA polymerase beta inserting dCMPNPP opposite GG template (GG0b). 分子名称: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]cytidine, DNA (5'-D(*CP*CP*CP*AP*CP*GP*GP*CP*CP*CP*AP*TP*CP*AP*CP*C)-3'), DNA (5'-D(*GP*GP*TP*GP*AP*TP*GP*GP*GP*C)-3'), ... 著者 Koag, M.C, Lee, S. 登録日 2014-06-24 公開日 2014-10-01 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.367 Å) 主引用文献 Structural Basis for the Inefficient Nucleotide Incorporation Opposite Cisplatin-DNA Lesion by Human DNA Polymerase beta. J.Biol.Chem., 289, 2014
7OU3	Crystal structure of Tga-AGOG, an 8-oxoguanine DNA glycosylase from Thermococcus gammatolerans 分子名称: CHLORIDE ION, GLYCEROL, N-glycosylase/DNA lyase 著者 Coste, F, Confalonieri, F, Castaing, B. 登録日 2021-06-11 公開日 2022-06-22 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.49 Å) 主引用文献 Structural and functional determinants of the archaeal 8-oxoguanine-DNA glycosylase AGOG for DNA damage recognition and processing. Nucleic Acids Res., 50, 2022
1EAW	Crystal structure of the MTSP1 (matriptase)-BPTI (aprotinin) complex 分子名称: PANCREATIC TRYPSIN INHIBITOR, SUPPRESSOR OF TUMORIGENICITY 14 著者 Friedrich, R, Bode, W. 登録日 2001-07-17 公開日 2002-01-28 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.93 Å) 主引用文献 Catalytic Domain Structures of Mt-Sp1/Matriptase, a Matrix-Degrading Transmembrane Serine Proteinase. J.Biol.Chem., 277, 2002
8H50	Crystal structure of carboxyspermidine dehydrogenase from Helicobacter pylori in space group C2221 分子名称: Saccharopine dehydrogenase 著者 Ko, K.Y, Park, S.C, Cho, S.Y, Yoon, S.I. 登録日 2022-10-11 公開日 2022-11-09 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Structural analysis of carboxyspermidine dehydrogenase from Helicobacter pylori. Biochem.Biophys.Res.Commun., 635, 2022
8H4Z	Crystal structure of carboxyspermidine dehydrogenase from Helicobacter pylori in space group P21212 分子名称: Saccharopine dehydrogenase 著者 Ko, K.Y, Park, S.C, Cho, S.Y, Yoon, S.I. 登録日 2022-10-11 公開日 2022-11-09 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structural analysis of carboxyspermidine dehydrogenase from Helicobacter pylori. Biochem.Biophys.Res.Commun., 635, 2022
8H52	Crystal structure of Helicobacter pylori carboxyspermidine dehydrogenase in complex with NADP 分子名称: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Saccharopine dehydrogenase 著者 Ko, K.Y, Park, S.C, Cho, S.Y, Yoon, S.I. 登録日 2022-10-11 公開日 2022-11-09 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Structural analysis of carboxyspermidine dehydrogenase from Helicobacter pylori. Biochem.Biophys.Res.Commun., 635, 2022
7OPK	Crystal structure of C. thermophilum Xrn2 分子名称: 5'-3' exoribonuclease, MAGNESIUM ION 著者 Overbeck, J.H, Sprangers, R. 登録日 2021-06-01 公開日 2022-07-06 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Observation of conformational changes that underlie the catalytic cycle of Xrn2. Nat.Chem.Biol., 18, 2022
8HIJ	The 5-MTHF-bound BRIL-SLC19A1/Fab/Nb ternary complex 分子名称: Anti-BRIL Fab heavy chain, Anti-BRIL Fab light chain, Anti-Fab nanobody, ... 著者 Zhang, Z, Dang, Y. 登録日 2022-11-20 公開日 2022-12-21 最終更新日 2023-01-11 実験手法 ELECTRON MICROSCOPY (3.54 Å) 主引用文献 Molecular mechanism of substrate recognition by folate transporter SLC19A1. Cell Discov, 8, 2022
8HEH	Crystal structure of GCN5-related N-acetyltransferase 05790 分子名称: COENZYME A, GLYCEROL, GNAT family N-acetyltransferase 著者 Xu, M.X, Ran, T.T, Wang, W. 登録日 2022-11-08 公開日 2022-12-21 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Crystal structure of prodigiosin binding protein PgbP, a GNAT family protein, in Serratia marcescens FS14. Biochem.Biophys.Res.Commun., 640, 2022
4V4V	Structure of a pre-translocational E. coli ribosome obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1056 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal subunit protein S10, ... 著者 Mitra, K, Frank, J. 登録日 2006-05-09 公開日 2014-07-09 最終更新日 2024-02-28 実験手法 ELECTRON MICROSCOPY (15 Å) 主引用文献 Elongation arrest by SecM via a cascade of ribosomal RNA rearrangements Mol.Cell, 22, 2006
1E59	E.coli cofactor-dependent phosphoglycerate mutase complexed with vanadate 分子名称: CHLORIDE ION, PHOSPHOGLYCERATE MUTASE, TETRAMETAVANADATE 著者 Bond, C.S, Hunter, W.N. 登録日 2000-07-19 公開日 2002-02-05 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 Mechanistic Implications for Escherichia Coli Cofactor-Dependent Phosphoglycerate Mutase Based on the High-Resolution Crystal Structure of a Vanadate Complex. J.Mol.Biol., 316, 2002
1ELV	CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF HUMAN COMPLEMENT C1S PROTEASE 分子名称: 2-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-ETHANESULFONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, COMPLEMENT C1S COMPONENT, ... 著者 Gaboriaud, C, Rossi, V, Bally, I, Arlaud, G, Fontecilla-Camps, J.-C. 登録日 2000-03-14 公開日 2001-03-14 最終更新日 2021-11-03 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Crystal structure of the catalytic domain of human complement c1s: a serine protease with a handle. EMBO J., 19, 2000
1ENW	ELONGATION FACTOR TFIIS DOMAIN II 分子名称: TRANSCRIPTION ELONGATION FACTOR S-II 著者 Morin, P.E, Awrey, D.E, Edwards, A.M, Arrowsmith, C.H. 登録日 2000-03-21 公開日 2000-04-12 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Elongation factor TFIIS contains three structural domains: solution structure of domain II. Proc.Natl.Acad.Sci.USA, 93, 1996
4V4W	Structure of a SecM-stalled E. coli ribosome complex obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1143 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal subunit protein S10, ... 著者 Mitra, K, Frank, J. 登録日 2006-05-09 公開日 2014-07-09 最終更新日 2024-02-28 実験手法 ELECTRON MICROSCOPY (15 Å) 主引用文献 Elongation arrest by SecM via a cascade of ribosomal RNA rearrangements Mol.Cell, 22, 2006

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