PDB: 2121 件ウェブページステータス検索Chemie searchBIRD

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7JOT	Adeno-associated virus strain AAV7 capsid icosahedral structure 分子名称: Capsid protein 著者 Firlar, E, Yost, S.A, Mercer, A.C, Kaelber, J.T. 登録日 2020-08-07 公開日 2020-10-07 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (2.7 Å) 主引用文献 Adeno-associated virus strain AAV7 capsid icosahedral structure To Be Published
6QUG	GHK tagged MBP-Nup98(1-29) 分子名称: COPPER (II) ION, Maltodextrin-binding protein,Nucleoporin, putative, ... 著者 Huyton, T, Gorlich, D. 登録日 2019-02-27 公開日 2020-05-27 最終更新日 2024-05-15 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 The copper(II)-binding tripeptide GHK, a valuable crystallization and phasing tag for macromolecular crystallography. Acta Crystallogr D Struct Biol, 76, 2020
7R81	Structure of the translating Neurospora crassa ribosome arrested by cycloheximide 分子名称: 18S rRNA, 26S rRNA, 4-{(2R)-2-[(1S,3S,5S)-3,5-dimethyl-2-oxocyclohexyl]-2-hydroxyethyl}piperidine-2,6-dione, ... 著者 Shen, L, Su, Z, Yang, K, Wu, C, Becker, T, Bell-Pedersen, D, Zhang, J, Sachs, M.S. 登録日 2021-06-25 公開日 2021-12-01 最終更新日 2024-06-05 実験手法 ELECTRON MICROSCOPY (2.7 Å) 主引用文献 Structure of the translating Neurospora ribosome arrested by cycloheximide Proc.Natl.Acad.Sci.USA, 118, 2021
6YV9	Mannosyltransferase PcManGT from Pyrobaculum calidifontis in complex with GDP-Man and Mn2+ 分子名称: GUANOSINE-5'-DIPHOSPHATE-ALPHA-D-MANNOSE, Glycosyl transferase, family 2, ... 著者 Divne, C, Gandini, R. 登録日 2020-04-28 公開日 2020-07-22 最終更新日 2024-05-15 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 A Transmembrane Crenarchaeal Mannosyltransferase Is Involved in N-Glycan Biosynthesis and Displays an Unexpected Minimal Cellulose-Synthase-like Fold. J.Mol.Biol., 432, 2020
7MQA	Cryo-EM structure of the human SSU processome, state post-A1 分子名称: 18S rRNA, 40S ribosomal protein S11, 40S ribosomal protein S12, ... 著者 Vanden Broeck, A, Singh, S, Klinge, S. 登録日 2021-05-05 公開日 2021-09-22 最終更新日 2021-09-29 実験手法 ELECTRON MICROSCOPY (2.7 Å) 主引用文献 Nucleolar maturation of the human small subunit processome. Science, 373, 2021
5DTL	Crystal structure of mEos2-A69T fluorescent protein 分子名称: Green to red photoconvertible GFP-like protein EosFP 著者 Berardozzi, R, Adam, V, Martins, A, Bourgeois, D. 登録日 2015-09-18 公開日 2015-12-30 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Arginine 66 Controls Dark-State Formation in Green-to-Red Photoconvertible Fluorescent Proteins. J.Am.Chem.Soc., 138, 2016
2JAD	Yellow fluorescent protein - glutaredoxin fusion protein 分子名称: SULFATE ION, YELLOW FLUORESCENT PROTEIN GLUTAREDOXIN FUSION PROTEIN 著者 Hakansson, K.O, Winther, J.R. 登録日 2006-11-27 公開日 2006-12-20 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Structure of Glutaredoxin Grx1P C30S Mutant from Yeast. Acta Crystallogr.,Sect.D, 63, 2007
6YV7	Mannosyltransferase PcManGT from Pyrobaculum calidifontis 分子名称: Glycosyl transferase, family 2 著者 Divne, C, Rosaria, G. 登録日 2020-04-28 公開日 2020-07-22 最終更新日 2020-08-05 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 A Transmembrane Crenarchaeal Mannosyltransferase Is Involved in N-Glycan Biosynthesis and Displays an Unexpected Minimal Cellulose-Synthase-like Fold. J.Mol.Biol., 432, 2020
7ZAH	Cryo-EM structure of a Pyrococcus abyssi 30S bound to Met-initiator tRNA, mRNA, aIF1A and aIF5B 分子名称: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... 著者 Coureux, P.D, Bourgeois, G, Mechulam, Y, Schmitt, E, Kazan, R. 登録日 2022-03-22 公開日 2022-08-03 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (2.7 Å) 主引用文献 Role of aIF5B in archaeal translation initiation. Nucleic Acids Res., 50, 2022
3RA4	Structural studies of AAV8 capsid transitions associated with endosomal trafficking 分子名称: Capsid protein, DNA (5'-D(*CP*A)-3') 著者 Nam, H.-J, Gurda, B, McKenna, R, Porter, M, Byrne, B, Salganik, M, Muzyczka, N, Agbandje-McKenna, M. 登録日 2011-03-27 公開日 2011-09-21 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Structural studies of adeno-associated virus serotype 8 capsid transitions associated with endosomal trafficking. J.Virol., 85, 2011
3RA2	Structural studies of AAV8 capsid transitions associated with endosomal trafficking 分子名称: Capsid protein 著者 Nam, H.-J, Gurda, B, McKenna, R, Porter, M, Byrne, B, Salganik, M, Muzyczka, N, Agbandje-McKenna, M. 登録日 2011-03-26 公開日 2011-09-21 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Structural studies of adeno-associated virus serotype 8 capsid transitions associated with endosomal trafficking. J.Virol., 85, 2011
3RA9	Structural studies of AAV8 capsid transitions associated with endosomal trafficking 分子名称: Capsid protein, DNA (5'-D(P*CP*A)-3') 著者 Nam, H.-J, Gurda, B, McKenna, R, Porter, M, Byrne, B, Salganik, M, Muzyczka, N, Agbandje-McKenna, M. 登録日 2011-03-27 公開日 2011-09-21 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Structural studies of adeno-associated virus serotype 8 capsid transitions associated with endosomal trafficking. J.Virol., 85, 2011
8T15	Cryo-EM structure of dodecameric hub domain of CaMKII alpha 分子名称: Venus-tagged CaMKII Alpha Association Domain 著者 Chien, C.-T, Chiu, W, Khan, S. 登録日 2023-06-01 公開日 2024-06-12 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (2.7 Å) 主引用文献 Hub stability in the calcium calmodulin-dependent protein kinase II. Commun Biol, 7, 2024
1GFP	OMPF PORIN (MUTANT R42C) 分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, MATRIX PORIN OUTER MEMBRANE PROTEIN F 著者 Lou, K.-L, Schirmer, T. 登録日 1996-05-08 公開日 1996-12-07 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Structural and functional characterization of OmpF porin mutants selected for larger pore size. I. Crystallographic analysis. J.Biol.Chem., 271, 1996
6ZM7	SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-EBP1 ribosome complex 分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ... 著者 Thoms, M, Buschauer, R, Ameismeier, M, Denk, T, Kratzat, H, Mackens-Kiani, T, Cheng, J, Berninghausen, O, Becker, T, Beckmann, R. 登録日 2020-07-01 公開日 2020-07-29 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (2.7 Å) 主引用文献 Structural basis for translational shutdown and immune evasion by the Nsp1 protein of SARS-CoV-2. Science, 369, 2020
4AUR	LeoA bacterial dynamin GTPase from ETEC 分子名称: LEOA, SULFATE ION 著者 Michie, K.A, Low, H.H, Lowe, J. 登録日 2012-05-21 公開日 2013-08-28 最終更新日 2014-10-22 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Leoa, B and C from Enterotoxigenic Escherichia Coli (Etec) are Bacterial Dynamins. Plos One, 9, 2014
4PL0	Crystal structure of the antibacterial peptide ABC transporter McjD in an outward occluded state 分子名称: MAGNESIUM ION, Microcin-J25 export ATP-binding/permease protein McjD, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ... 著者 Choudhury, H.G, Beis, K. 登録日 2014-05-15 公開日 2014-06-18 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Structure of an antibacterial peptide ATP-binding cassette transporter in a novel outward occluded state. Proc.Natl.Acad.Sci.USA, 111, 2014
7XB1	Crystal structure of Omicron BA.3 RBD complexed with hACE2 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, ... 著者 Li, W, Meng, Y, Liao, H. 登録日 2022-03-19 公開日 2022-07-06 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Structural basis of human ACE2 higher binding affinity to currently circulating Omicron SARS-CoV-2 sub-variants BA.2 and BA.1.1. Cell, 185, 2022
3RA8	Structural studies of AAV8 capsid transitions associated with endosomal trafficking 分子名称: ADENOSINE MONOPHOSPHATE, Capsid protein 著者 Nam, H.-J, Gurda, B, McKenna, R, Porter, M, Byrne, B, Salganik, M, Muzyczka, N, Agbandje-McKenna, M. 登録日 2011-03-27 公開日 2011-09-21 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Structural studies of adeno-associated virus serotype 8 capsid transitions associated with endosomal trafficking. J.Virol., 85, 2011
8FEF	Structure of Mce1 transporter from Mycobacterium smegmatis (Map0) 分子名称: ABC transporter, ATP-binding protein,Green fluorescent protein chimera, ABC-transporter integral membrane protein, ... 著者 Chen, J, Bhabha, G, Ekiert, D.C. 登録日 2022-12-06 公開日 2023-02-22 最終更新日 2023-08-23 実験手法 ELECTRON MICROSCOPY (2.71 Å) 主引用文献 Structure of an endogenous mycobacterial MCE lipid transporter. Nature, 620, 2023
8CF5	Translocation intermediate 1 (TI-1) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin 分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ... 著者 Milicevic, N, Jenner, L, Myasnikov, A, Yusupov, M, Yusupova, G. 登録日 2023-02-02 公開日 2023-09-20 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (2.71 Å) 主引用文献 mRNA reading frame maintenance during eukaryotic ribosome translocation. Nature, 625, 2024
6SVQ	Crystal structure of human GFAT-1 G461E after UDP-GlcNAc soaking 分子名称: GLUCOSE-6-PHOSPHATE, GLUTAMIC ACID, Glutamine--fructose-6-phosphate-aminotransferase [isomerizing] 1 著者 Ruegenberg, S, Horn, M, Pichlo, C, Allmeroth, K, Baumann, U, Denzel, M.S. 登録日 2019-09-18 公開日 2020-01-15 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.717 Å) 主引用文献 Loss of GFAT-1 feedback regulation activates the hexosamine pathway that modulates protein homeostasis. Nat Commun, 11, 2020
7ZC2	Dipeptide and tripeptide Permease C (DtpC) 分子名称: Amino acid/peptide transporter 著者 Killer, M, Finocchio, G, Pardon, E, Steyaert, J, Loew, C. 登録日 2022-03-25 公開日 2022-07-06 最終更新日 2024-07-24 実験手法 ELECTRON MICROSCOPY (2.72 Å) 主引用文献 Cryo-EM Structure of an Atypical Proton-Coupled Peptide Transporter: Di- and Tripeptide Permease C. Front Mol Biosci, 9, 2022
8EVQ	Hypopseudouridylated Ribosome bound with TSV IRES, eEF2, GDP, and sordarin, Structure I 分子名称: 18S rRNA, 25S rRNA, 40S ribosomal protein S0-A, ... 著者 Zhao, Y, Rai, J, Li, H. 登録日 2022-10-20 公開日 2023-09-06 実験手法 ELECTRON MICROSCOPY (2.72 Å) 主引用文献 Regulation of translation by ribosomal RNA pseudouridylation. Sci Adv, 9, 2023
8CDL	80S S. cerevisiae ribosome with ligands in hybrid-2 pre-translocation (PRE-H2) complex 分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ... 著者 Milicevic, N, Jenner, L, Myasnikov, A, Yusupov, M, Yusupova, G. 登録日 2023-01-31 公開日 2023-09-20 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (2.72 Å) 主引用文献 mRNA reading frame maintenance during eukaryotic ribosome translocation. Nature, 625, 2024

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