PDB: 45953 件ウェブページステータス検索Chemie searchBIRD

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7X5E	Nrf2-MafG heterodimer bound with CsMBE1 分子名称: DNA (5'-D(*CP*AP*TP*GP*AP*TP*GP*AP*GP*TP*CP*AP*GP*CP*AP*A)-3'), DNA (5'-D(*GP*TP*TP*GP*CP*TP*GP*AP*CP*TP*CP*AP*TP*CP*AP*T)-3'), HEXAETHYLENE GLYCOL, ... 著者 Sengoku, T, Shiina, M, Suzuki, K, Hamada, K, Sato, K, Uchiyama, A, Okada, C, Baba, S, Ohta, T, Motohashi, H, Yamamoto, M, Ogata, K. 登録日 2022-03-04 公開日 2022-11-09 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural basis of transcription regulation by CNC family transcription factor, Nrf2. Nucleic Acids Res., 50, 2022
2FF4	Mycobacterium tuberculosis EmbR in complex with low affinity phosphopeptide 分子名称: DNA repair protein RAD9, Probable regulatory protein embR 著者 Futterer, K, Alderwick, L.J, Besra, G.S. 登録日 2005-12-19 公開日 2006-01-24 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Molecular structure of EmbR, a response element of Ser/Thr kinase signaling in Mycobacterium tuberculosis. Proc.Natl.Acad.Sci.Usa, 103, 2006
100D	CRYSTAL STRUCTURE OF THE HIGHLY DISTORTED CHIMERIC DECAMER R(C)D(CGGCGCCG)R(G)-SPERMINE COMPLEX-SPERMINE BINDING TO PHOSPHATE ONLY AND MINOR GROOVE TERTIARY BASE-PAIRING 分子名称: DNA/RNA (5'-R(*CP*)-D(*CP*GP*GP*CP*GP*CP*CP*GP*)-R(*G)-3'), SPERMINE 著者 Ban, C, Ramakrishnan, B, Sundaralingam, M. 登録日 1994-12-05 公開日 1995-03-31 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Crystal structure of the highly distorted chimeric decamer r(C)d(CGGCGCCG)r(G).spermine complex--spermine binding to phosphate only and minor groove tertiary base-pairing. Nucleic Acids Res., 22, 1994
3WOF	Crystal structure of P23-45 gp39 (6-132) bound to Thermus thermophilus RNA polymerase beta-flap domain 分子名称: DNA-directed RNA polymerase subunit beta, Putative uncharacterized protein 著者 Tagami, S, Sekine, S, Minakhin, L, Esyunina, D, Akasaka, R, Shirouzu, M, Kulbachinskiy, A, Severinov, K, Yokoyama, S. 登録日 2013-12-26 公開日 2014-03-12 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (3.298 Å) 主引用文献 Structural basis for promoter specificity switching of RNA polymerase by a phage factor. Genes Dev., 28, 2014
8GAO	bacteriophage T4 stalled primosome with mutant gp41-E227Q 分子名称: DNA (70-mer), DNA primase, DnaB-like replicative helicase, ... 著者 Feng, X, Li, H. 登録日 2023-02-23 公開日 2023-06-07 最終更新日 2023-08-23 実験手法 ELECTRON MICROSCOPY (4.1 Å) 主引用文献 Structural basis of the T4 bacteriophage primosome assembly and primer synthesis. Nat Commun, 14, 2023
3S8Q	Crystal structure of the R-M controller protein C.Esp1396I OL operator complex 分子名称: DNA (5'-D(*AP*TP*GP*TP*GP*AP*CP*TP*TP*AP*TP*AP*GP*TP*CP*CP*GP*TP*G)-3'), DNA (5'-D(*TP*CP*AP*CP*GP*GP*AP*CP*TP*AP*TP*AP*AP*GP*TP*CP*AP*CP*A)-3'), R-M CONTROLLER PROTEIN 著者 McGeehan, J.E, Ball, N.J, Streeter, S.D, Thresh, S.-J, Kneale, G.G. 登録日 2011-05-30 公開日 2012-01-18 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Recognition of dual symmetry by the controller protein C.Esp1396I based on the structure of the transcriptional activation complex. Nucleic Acids Res., 40, 2012
8EMB	X-ray crystal structure of Thermosynechococcus elongatus Si3 domain of RNA polymerase RpoC2 subunit 分子名称: DNA-directed RNA polymerase subunit beta' 著者 Murakami, K.S, Imashimizu, M, Qayyum, M.Z, Vishwakarma, R.K, Yuzenkova, Y. 登録日 2022-09-27 公開日 2022-11-09 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (3.06 Å) 主引用文献 Structure and function of the Si3 insertion integrated into the trigger loop/helix of cyanobacterial RNA polymerase. Proc.Natl.Acad.Sci.USA, 121, 2024
3THO	Crystal structure of Mre11:Rad50 in its ATP/ADP bound state 分子名称: ADENOSINE-5'-DIPHOSPHATE, Exonuclease, putative, ... 著者 Moeckel, C, Lammens, K. 登録日 2011-08-19 公開日 2011-10-12 最終更新日 2017-11-08 実験手法 X-RAY DIFFRACTION (2.6081 Å) 主引用文献 ATP driven structural changes of the bacterial Mre11:Rad50 catalytic head complex. Nucleic Acids Res., 40, 2012
5VU5	TNA polymerase, apo 分子名称: DNA polymerase 著者 Chim, N, Chaput, J.C. 登録日 2017-05-18 公開日 2017-12-06 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structural basis for TNA synthesis by an engineered TNA polymerase. Nat Commun, 8, 2017
6M4D	Structural mechanism of nucleosome dynamics governed by human histone variants H2A.B and H2A.Z.2.2 分子名称: DNA (125-MER), Histone H2A.V, Histone H2B type 2-E, ... 著者 Zhou, M, Dai, L.C, Li, C.M, Shi, L.X, Huang, Y, Guo, Z.Q. 登録日 2020-03-06 公開日 2020-09-23 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (4.4 Å) 主引用文献 Structural basis of nucleosome dynamics modulation by histone variants H2A.B and H2A.Z.2.2. Embo J., 40, 2021
1NT9	Complete 12-subunit RNA polymerase II 分子名称: DNA-DIRECTED RNA POLYMERASE II 13.6 KD POLYPEPTIDE, DNA-DIRECTED RNA POLYMERASE II 19 KD POLYPEPTIDE, DNA-DIRECTED RNA POLYMERASE II LARGEST SUBUNIT, ... 著者 Armache, K.-J, Kettenberger, H, Cramer, P. 登録日 2003-01-29 公開日 2003-04-22 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (4.2 Å) 主引用文献 Architecture of initiation-competent 12-subunit RNA polymerase II Proc.Natl.Acad.Sci.USA, 100, 2003
5ZUO	Crystal Structure of BZ junction in diverse sequence 分子名称: DNA (5'-D(*AP*CP*GP*GP*TP*TP*TP*AP*TP*CP*GP*CP*GP*CP*GP*CP*G)-3'), DNA (5'-D(*GP*TP*CP*GP*CP*GP*CP*GP*CP*GP*AP*TP*AP*AP*AP*CP*C)-3'), Double-stranded RNA-specific adenosine deaminase 著者 Kim, K.K, Kim, D. 登録日 2018-05-08 公開日 2018-08-29 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (2.902 Å) 主引用文献 Sequence preference and structural heterogeneity of BZ junctions. Nucleic Acids Res., 46, 2018
3MLQ	Crystal structure of the Thermus thermophilus transcription-repair coupling factor RNA polymerase interacting domain with the Thermus aquaticus RNA polymerase beta1 domain 分子名称: DNA-directed RNA polymerase subunit beta, PHOSPHATE ION, Transcription-repair coupling factor 著者 Darst, S.A, Westblade, L.F, Campbell, E.A. 登録日 2010-04-18 公開日 2010-10-13 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.91 Å) 主引用文献 Structural basis for the bacterial transcription-repair coupling factor/RNA polymerase interaction. Nucleic Acids Res., 38, 2010
5FPK	MONOMERIC RADA IN COMPLEX WITH FATA TETRAPEPTIDE 分子名称: DNA REPAIR AND RECOMBINATION PROTEIN RADA, FHTG PEPTIDE, PHOSPHATE ION 著者 Scott, D.E, Marsh, M, Blundell, T.L, Abell, C, Hyvonen, M. 登録日 2015-12-01 公開日 2016-03-30 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.343 Å) 主引用文献 Structure Activity Relationship of the Peptide Binding Motif Mediating the Rad51:Brca2 Protein-Protein Interaction. FEBS Lett., 590, 2016
5FOT	HUMANISED MONOMERIC RADA IN COMPLEX WITH FHTU TETRAPEPTIDE 分子名称: DNA REPAIR AND RECOMBINATION PROTEIN RADA, FHTU PEPTIDE, PHOSPHATE ION 著者 Scott, D.E, Marsh, M, Blundell, T.L, Abell, C, Hyvonen, M. 登録日 2015-11-26 公開日 2016-03-30 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.189 Å) 主引用文献 Structure Activity Relationship of the Peptide Binding Motif Mediating the Rad51:Brca2 Protein-Protein Interaction. FEBS Lett., 590, 2016
5FOU	HUMANISED MONOMERIC RADA IN COMPLEX WITH FHPA TETRAPEPTIDE 分子名称: DNA REPAIR AND RECOMBINATION PROTEIN RADA, FHPA PEPTIDE, PHOSPHATE ION 著者 Scott, D.E, Marsh, M, Blundell, T.L, Abell, C, Hyvonen, M. 登録日 2015-11-26 公開日 2016-03-30 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Structure Activity Relationship of the Peptide Binding Motif Mediating the Rad51:Brca2 Protein-Protein Interaction. FEBS Lett., 590, 2016
5FOX	HUMANISED MONOMERIC RADA IN COMPLEX WITH FHAA TETRAPEPTIDE 分子名称: DNA REPAIR AND RECOMBINATION PROTEIN RADA, FHAA PEPTIDE, GLYCEROL, ... 著者 Scott, D.E, Marsh, M, Blundell, T.L, Abell, C, Hyvonen, M. 登録日 2015-11-26 公開日 2016-03-30 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 Structure Activity Relationship of the Peptide Binding Motif Mediating the Rad51:Brca2 Protein-Protein Interaction. FEBS Lett., 590, 2016
5FOW	HUMANISED MONOMERIC RADA IN COMPLEX WITH WHTA TETRAPEPTIDE 分子名称: DNA repair and recombination protein RadA, PHOSPHATE ION, WHTA PEPTIDE 著者 Scott, D.E, Marsh, M, Blundell, T.L, Abell, C, Hyvonen, M. 登録日 2015-11-26 公開日 2016-03-30 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.797 Å) 主引用文献 Structure Activity Relationship of the Peptide Binding Motif Mediating the Rad51:Brca2 Protein-Protein Interaction. FEBS Lett., 590, 2016
5FOV	HUMANISED MONOMERIC RADA IN COMPLEX WITH FHTG TETRAPEPTIDE 分子名称: DNA repair and recombination protein RadA, FHTG PEPTIDE, GLYCEROL, ... 著者 Scott, D.E, Marsh, M, Blundell, T.L, Abell, C, Hyvonen, M. 登録日 2015-11-26 公開日 2016-03-30 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.739 Å) 主引用文献 Structure Activity Relationship of the Peptide Binding Motif Mediating the Rad51:Brca2 Protein-Protein Interaction. FEBS Lett., 590, 2016
5GVE	Human TOP3B-TDRD3 complex 分子名称: DNA topoisomerase 3-beta-1, MAGNESIUM ION, Tudor domain-containing protein 3 著者 Goto-Ito, S, Yamagata, A, Sato, Y, Takahashi, T.S, Fukai, S. 登録日 2016-09-05 公開日 2017-06-14 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (3.606 Å) 主引用文献 Structural basis of the interaction between Topoisomerase III beta and the TDRD3 auxiliary factor Sci Rep, 7, 2017
1MUL	Crystal structure of the E. coli HU alpha2 protein 分子名称: DNA binding protein HU-alpha 著者 Ramstein, J, Hervouet, N, Coste, F, Zelwer, C, Oberto, J, Castaing, B. 登録日 2002-09-24 公開日 2003-08-05 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Evidence of a Thermal Unfolding Dimeric Intermediate for the Escherichia coli Histone-like HU Proteins: Thermodynamics and Structure. J.Mol.Biol., 331, 2003
1PQV	RNA polymerase II-TFIIS complex 分子名称: DNA-directed RNA polymerase II 13.6 kDa polypeptide, DNA-directed RNA polymerase II 14.2 kDa polypeptide, DNA-directed RNA polymerase II 140 kDa polypeptide, ... 著者 Kettenberger, H, Armache, K.-J, Cramer, P. 登録日 2003-06-19 公開日 2003-08-19 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (3.8 Å) 主引用文献 Architecture of the RNA Polymerase II-TFIIS Complex and Implications for mRNA Cleavage Cell(Cambridge,Mass.), 114, 2003
5GVC	Human Topoisomerase IIIb topo domain 分子名称: DNA topoisomerase 3-beta-1, MAGNESIUM ION 著者 Goto-Ito, S, Yamagata, A, Sato, Y, Takahashi, T.S, Fukai, S. 登録日 2016-09-05 公開日 2017-06-14 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.436 Å) 主引用文献 Structural basis of the interaction between Topoisomerase III beta and the TDRD3 auxiliary factor Sci Rep, 7, 2017
7VDV	The overall structure of human chromatin remodeling PBAF-nucleosome complex 分子名称: ADENOSINE-5'-DIPHOSPHATE, AT-rich interactive domain-containing protein 2,AT-rich interactive domain-containing protein 2, Actin, ... 著者 Chen, Z.C, Chen, K.J, Yuan, J.J. 登録日 2021-09-07 公開日 2022-05-18 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Structure of human chromatin-remodelling PBAF complex bound to a nucleosome. Nature, 605, 2022
3BBB	Crystal structure of the NM23-H2 transcription factor complex with dinucleotide d(AG) 分子名称: DNA (5'-D(*AP*G)-3'), Nucleoside diphosphate kinase B 著者 Weichsel, A, Montfort, W.R. 登録日 2007-11-09 公開日 2008-09-23 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 NM23-H2 may play an indirect role in transcriptional activation of c-myc gene expression but does not cleave the nuclease hypersensitive element III1. Mol.Cancer Ther., 8, 2009

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