PDB: 2059 件ウェブページステータス検索Chemie searchBIRD

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7RK9	Cryo-EM Structure of Adeno-Associated Virus Serotype 1 with Engineered Peptide Domain PHP.B (AAV1-PHP.B) 分子名称: Capsid protein 著者 Fluck, E.C, Pumroy, R.A, Moiseenkova-Bell, V.Y. 登録日 2021-07-22 公開日 2021-08-04 最終更新日 2024-06-05 実験手法 ELECTRON MICROSCOPY (2.32 Å) 主引用文献 Context-Specific Function of the Engineered Peptide Domain of PHP.B. J.Virol., 95, 2021
6K2Y	Human Galectin-14 分子名称: Placental protein 13-like 著者 Su, J. 登録日 2019-05-15 公開日 2020-06-17 最終更新日 2021-03-10 実験手法 X-RAY DIFFRACTION (1.57 Å) 主引用文献 Structure-function studies of galectin-14, an important effector molecule in embryology. Febs J., 288, 2021
3QLU	Crystal structure of the GluK2/GluK5 (GluR6/KA2) ATD dimer assembly 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, GLYCEROL, ... 著者 Kumar, J, Mayer, M.L. 登録日 2011-02-03 公開日 2011-08-03 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.906 Å) 主引用文献 Structure and assembly mechanism for heteromeric kainate receptors. Neuron, 71, 2011
3QLT	Crystal structure of a GluK2 (GluR6) glycan wedge homodimer assembly 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Glutamate receptor, ionotropic kainate 2 著者 Kumar, J, Mayer, M.L. 登録日 2011-02-03 公開日 2011-08-03 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.988 Å) 主引用文献 Structure and assembly mechanism for heteromeric kainate receptors. Neuron, 71, 2011
3OLZ	Crystal structure of the GluK3 (GluR7) ATD dimer at 2.75 Angstrom resolution 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, Glutamate receptor, ... 著者 Kumar, J, Mayer, M.L. 登録日 2010-08-26 公開日 2010-11-03 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.75 Å) 主引用文献 Crystal Structures of the Glutamate Receptor Ion Channel GluK3 and GluK5 Amino-Terminal Domains. J.Mol.Biol., 404, 2010
4V8M	High-resolution cryo-electron microscopy structure of the Trypanosoma brucei ribosome 分子名称: 18S RRNA OF THE SMALL RIBOSOMAL SUBUNIT, 40S RIBOSOMAL PROTEIN S10, PUTATIVE, ... 著者 Hashem, Y, des Georges, A, Fu, J, Buss, S.N, Jossinet, F, Jobe, A, Zhang, Q, Liao, H.Y, Grassucci, R.A, Bajaj, C, Westhof, E, Madison-Antenucci, S, Frank, J. 登録日 2012-12-09 公開日 2014-07-09 最終更新日 2019-12-11 実験手法 ELECTRON MICROSCOPY (5.57 Å) 主引用文献 High-Resolution Cryo-Electron Microscopy Structure of the Trypanosoma Brucei Ribosome. Nature, 494, 2013
8SCB	Terminating ribosome with SRI-41315 分子名称: (2S,4aS)-2-cyclobutyl-10-methyl-3-phenyl-2,10-dihydropyrimido[4,5-b]quinoline-4,5(3H,4aH)-dione, 18S_rRNA, 28S_rRNA, ... 著者 Yip, M.C.J, Coelho, J.P.L, Oltion, K, Tauton, J, Shao, S. 登録日 2023-04-05 公開日 2023-12-27 最終更新日 2024-07-17 実験手法 ELECTRON MICROSCOPY (2.5 Å) 主引用文献 The eRF1 degrader SRI-41315 acts as a molecular glue at the ribosomal decoding center. Nat.Chem.Biol., 20, 2024
8R6F	CryoEM structure of wheat 40S ribosomal subunit, body domain 分子名称: 30S ribosomal protein S11, chloroplastic, 30S ribosomal protein S4, ... 著者 Kravchenko, O.V, Baymukhametov, T.N, Afonina, Z.A, Vasilenko, K.S. 登録日 2023-11-22 公開日 2023-12-27 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (2.34 Å) 主引用文献 High-Resolution Structure and Internal Mobility of a Plant 40S Ribosomal Subunit. Int J Mol Sci, 24, 2023
3FB4	Crystal structure of adenylate kinase from Marinibacillus marinus 分子名称: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, ZINC ION 著者 Davlieva, M.G, Shamoo, Y. 登録日 2008-11-18 公開日 2009-09-29 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structure and biochemical characterization of an adenylate kinase originating from the psychrophilic organism Marinibacillus marinus. Acta Crystallogr.,Sect.F, 65, 2009
1VAX	Crystal Structure of Uricase from Arthrobacter globiformis 分子名称: Uric acid oxidase 著者 Hossain, M.T, Suzuki, K, Yamamoto, T, Imamura, S, Sekiguchi, T, Takenaka, A. 登録日 2004-02-19 公開日 2005-06-28 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.99 Å) 主引用文献 Crystal Structure of Uricase from Arthrobacter globiformis To be Published
7YSJ	GluK1-1a in nanodisc captured in SYM2081 bound desensitized state 分子名称: Glutamate receptor 著者 Dhingra, S, Kumar, J. 登録日 2022-08-12 公開日 2023-08-16 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (5.2 Å) 主引用文献 Functional Implications of the Exon 9 Splice Insert in GluK1 Kainate Receptors Elife, 2023
6YV7	Mannosyltransferase PcManGT from Pyrobaculum calidifontis 分子名称: Glycosyl transferase, family 2 著者 Divne, C, Rosaria, G. 登録日 2020-04-28 公開日 2020-07-22 最終更新日 2020-08-05 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 A Transmembrane Crenarchaeal Mannosyltransferase Is Involved in N-Glycan Biosynthesis and Displays an Unexpected Minimal Cellulose-Synthase-like Fold. J.Mol.Biol., 432, 2020
8DMB	Structure of Desulfovirgula thermocuniculi IsrB (DtIsrB) in complex with omega RNA and target DNA 分子名称: MAGNESIUM ION, Ubiquitin-like protein SMT3,IsrB protein,monomeric superfolder Green Fluorescent Protein, non-target DNA, ... 著者 Seiichi, H, Kappel, K, Zhang, F. 登録日 2022-07-08 公開日 2022-10-19 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Structure of the OMEGA nickase IsrB in complex with omega RNA and target DNA. Nature, 610, 2022
6YV9	Mannosyltransferase PcManGT from Pyrobaculum calidifontis in complex with GDP-Man and Mn2+ 分子名称: GUANOSINE-5'-DIPHOSPHATE-ALPHA-D-MANNOSE, Glycosyl transferase, family 2, ... 著者 Divne, C, Gandini, R. 登録日 2020-04-28 公開日 2020-07-22 最終更新日 2024-05-15 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 A Transmembrane Crenarchaeal Mannosyltransferase Is Involved in N-Glycan Biosynthesis and Displays an Unexpected Minimal Cellulose-Synthase-like Fold. J.Mol.Biol., 432, 2020
5H7H	Crystal structure of the BCL6 BTB domain in complex with F1324(10-13) 分子名称: 1,2-ETHANEDIOL, B-cell lymphoma 6 protein, F1324 peptide residues 10-13 著者 Sogabe, S, Ida, K, Lane, W, Snell, G. 登録日 2016-11-18 公開日 2016-12-07 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Discovery of high-affinity BCL6-binding peptide and its structure-activity relationship. Biochem. Biophys. Res. Commun., 482, 2017
5H8O	Crystal structure of an ASC-binding nanobody in complex with the CARD domain of ASC 分子名称: Apoptosis-associated speck-like protein containing a CARD, VHH nanobody 著者 Lu, A, Schmidt, F.I, Ruan, J, Tang, C, Wu, H, Ploegh, H.L. 登録日 2015-12-23 公開日 2016-04-06 最終更新日 2016-05-18 実験手法 X-RAY DIFFRACTION (4.206 Å) 主引用文献 A single domain antibody fragment that recognizes the adaptor ASC defines the role of ASC domains in inflammasome assembly. J.Exp.Med., 213, 2016
5H7G	Crystal structure of the BCL6 BTB domain in complex with F1324 分子名称: B-cell lymphoma 6 protein, F1324 peptide, SULFATE ION 著者 Sogabe, S, Ida, K, Lane, W, Snell, G. 登録日 2016-11-18 公開日 2016-12-07 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Discovery of high-affinity BCL6-binding peptide and its structure-activity relationship. Biochem. Biophys. Res. Commun., 482, 2017
5H8D	Crystal structure of an ASC binding nanobody 分子名称: VHH nanobody 著者 Lu, A, Schmidt, F.I, Ruan, J, Tang, C, Wu, H, Ploegh, H.L. 登録日 2015-12-23 公開日 2016-04-06 最終更新日 2016-05-18 実験手法 X-RAY DIFFRACTION (1.89 Å) 主引用文献 A single domain antibody fragment that recognizes the adaptor ASC defines the role of ASC domains in inflammasome assembly. J.Exp.Med., 213, 2016
6EI3	Crystal structure of auto inhibited POT family peptide transporter 分子名称: (2S)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE, Proton-dependent oligopeptide transporter family protein 著者 Newstead, S, Brinth, A, Vogeley, L, Caffrey, M. 登録日 2017-09-17 公開日 2017-11-22 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Proton movement and coupling in the POT family of peptide transporters. Proc. Natl. Acad. Sci. U.S.A., 114, 2017
6F62	Crystal structure of the SYCP1 N-terminal head-to-head assembly in open conformation 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, Synaptonemal complex protein 1 著者 Dunce, J.M, Davies, O.R. 登録日 2017-12-04 公開日 2018-06-06 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.066 Å) 主引用文献 Structural basis of meiotic chromosome synapsis through SYCP1 self-assembly. Nat. Struct. Mol. Biol., 25, 2018
6F64	Crystal structure of the SYCP1 C-terminal back-to-back assembly 分子名称: ACETATE ION, Synaptonemal complex protein 1 著者 Dunce, J.M, Millan, C, Uson, I, Davies, O.R. 登録日 2017-12-04 公開日 2018-06-06 最終更新日 2020-04-22 実験手法 X-RAY DIFFRACTION (2.493 Å) 主引用文献 Structural basis of meiotic chromosome synapsis through SYCP1 self-assembly. Nat. Struct. Mol. Biol., 25, 2018
6F5X	Crystal structure of the SYCP1 N-terminal head-to-head assembly in closed conformation 分子名称: IODIDE ION, Synaptonemal complex protein 1, TRIETHYLENE GLYCOL 著者 Ratcliff, M, Dunce, J.M, Davies, O.R. 登録日 2017-12-04 公開日 2018-06-06 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.91 Å) 主引用文献 Structural basis of meiotic chromosome synapsis through SYCP1 self-assembly. Nat. Struct. Mol. Biol., 25, 2018
7TGR	Structure of SARS-CoV-2 main protease in complex with GC376 分子名称: (1R,2S)-2-({N-[(benzyloxy)carbonyl]-L-leucyl}amino)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid, (1S,2S)-2-({N-[(benzyloxy)carbonyl]-L-leucyl}amino)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid, 1,2-ETHANEDIOL, ... 著者 Esler, M.A, Shi, K, Aihara, H, Harris, R.S. 登録日 2022-01-09 公開日 2022-05-04 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.68 Å) 主引用文献 Gain-of-Signal Assays for Probing Inhibition of SARS-CoV-2 M pro /3CL pro in Living Cells. Mbio, 13, 2022
4JQ7	Crystal structure of EGFR kinase domain in complex with compound 2a 分子名称: (2S)-2-[(5,6-diphenylfuro[2,3-d]pyrimidin-4-yl)amino]-2-phenylethanol, Epidermal growth factor receptor 著者 Peng, Y.H, Wu, J.S. 登録日 2013-03-20 公開日 2013-06-19 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.73 Å) 主引用文献 Protein Kinase Inhibitor Design by Targeting the Asp-Phe-Gly (DFG) Motif: The Role of the DFG Motif in the Design of Epidermal Growth Factor Receptor Inhibitors J.Med.Chem., 56, 2013
4JRV	Crystal structure of EGFR kinase domain in complex with compound 4c 分子名称: 4-(dimethylamino)-N-[3-(4-{[(1S)-2-hydroxy-1-phenylethyl]amino}-6-phenylfuro[2,3-d]pyrimidin-5-yl)phenyl]butanamide, Epidermal growth factor receptor 著者 Peng, Y.H, Wu, J.S. 登録日 2013-03-22 公開日 2013-06-19 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Protein Kinase Inhibitor Design by Targeting the Asp-Phe-Gly (DFG) Motif: The Role of the DFG Motif in the Design of Epidermal Growth Factor Receptor Inhibitors J.Med.Chem., 56, 2013

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