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3EOV
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Crystal structure of cyclophilin from Leishmania donovani ligated with cyclosporin A
分子名称: CYCLOSPORIN A, PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
著者Venugopal, V, Dasgupta, D, Datta, A.K, Banerjee, R.
登録日2008-09-29
公開日2008-11-11
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure of Cyclophilin from Leishmania Donovani Bound to Cyclosporin at 2.6 A Resolution: Correlation between Structure and Thermodynamic Data.
Acta Crystallogr.,Sect.D, 65, 2009
1S4A
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BU of 1s4a by Molmil
NMR Structure of a D,L alternating decamer of norleucine: double antiparallel beta-helix
分子名称: HCO-(D-Nle-L-Nle)3-D-MeNle-L-Nle-D-Nle-L-Nle-OMe
著者Navarro, E, Fenude, E, Celda, B.
登録日2004-01-15
公開日2004-02-24
最終更新日2023-11-15
実験手法SOLUTION NMR
主引用文献Conformational and structural analysis of the equilibrium between single- and double-strand beta-helix of a D,L-alternating oligonorleucine.
Biopolymers, 73, 2004
1HDU
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BU of 1hdu by Molmil
Crystal structure of bovine pancreatic carboxypeptidase A complexed with aminocarbonylphenylalanine at 1.75 A
分子名称: CARBOXYPEPTIDASE A, D-[(AMINO)CARBONYL]PHENYLALANINE, ZINC ION
著者Cho, J.H, Ha, N.-C, Chung, S.J, Kim, D.H, Choi, K.Y, Oh, B.-H.
登録日2000-11-17
公開日2001-11-15
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Insight Into the Stereochemistry in the Inhibition of Carboxypeptidase a with N-(Hydroxyaminocarbonyl)Phenylalanine: Binding Modes of an Enantiomeric Pair of the Inhibitor to Carboxypeptidase A
Bioorg.Med.Chem., 10, 2002
3WQF
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BU of 3wqf by Molmil
D-threo-3-hydroxyaspartate dehydratase from Delftia sp. HT23 in the metal-free form
分子名称: D-threo-3-hydroxyaspartate dehydratase, PYRIDOXAL-5'-PHOSPHATE
著者Yasutake, Y, Matsumoto, Y, Wada, M.
登録日2014-01-25
公開日2015-01-28
最終更新日2017-11-22
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural insights into the substrate stereospecificity of D-threo-3-hydroxyaspartate dehydratase from Delftia sp. HT23: a useful enzyme for the synthesis of optically pure L-threo- and D-erythro-3-hydroxyaspartate
Appl.Microbiol.Biotechnol., 99, 2015
3WQG
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BU of 3wqg by Molmil
D-threo-3-hydroxyaspartate dehydratase C353A mutant in the metal-free form
分子名称: D-threo-3-hydroxyaspartate dehydratase, GLYCEROL, PYRIDOXAL-5'-PHOSPHATE
著者Yasutake, Y, Matsumoto, Y, Wada, M.
登録日2014-01-25
公開日2015-01-28
最終更新日2017-11-22
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Structural insights into the substrate stereospecificity of D-threo-3-hydroxyaspartate dehydratase from Delftia sp. HT23: a useful enzyme for the synthesis of optically pure L-threo- and D-erythro-3-hydroxyaspartate
Appl.Microbiol.Biotechnol., 99, 2015
2QJM
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BU of 2qjm by Molmil
Crystal structure of the K271E mutant of Mannonate dehydratase from Novosphingobium aromaticivorans complexed with Mg and D-mannonate
分子名称: D-MANNONIC ACID, MAGNESIUM ION, Mandelate racemase/muconate lactonizing enzyme
著者Fedorov, A.A, Fedorov, E.V, Rakus, J.F, Vick, J.E, Gerlt, J.A, Almo, S.C.
登録日2007-07-08
公開日2007-10-30
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Evolution of enzymatic activities in the enolase superfamily: D-Mannonate dehydratase from Novosphingobium aromaticivorans.
Biochemistry, 46, 2007
2DNS
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BU of 2dns by Molmil
The crystal structure of D-amino acid amidase from Ochrobactrum anthropi SV3 complexed with D-Phenylalanine
分子名称: BARIUM ION, D-PHENYLALANINE, D-amino acid amidase
著者Okazaki, S, Suzuki, A, Komeda, H, Asano, Y, Yamane, T.
登録日2006-04-26
公開日2006-05-09
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal Structure and Functional Characterization of a D-Stereospecific Amino Acid Amidase from Ochrobactrum anthropi SV3, a New Member of the Penicillin-recognizing Proteins
J.Mol.Biol., 368, 2007
3TRV
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BU of 3trv by Molmil
Crystal structure of quasiracemic villin headpiece subdomain containing (F5Phe17) substitution
分子名称: D-Villin-1, ISOPROPYL ALCOHOL, L-Villin-1, ...
著者Mortenson, D.E, Satyshur, K.A, Gellman, S.H, Forest, K.T.
登録日2011-09-11
公開日2012-01-25
最終更新日2017-11-08
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Quasiracemic crystallization as a tool to assess the accommodation of noncanonical residues in nativelike protein conformations.
J.Am.Chem.Soc., 134, 2012
2I57
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BU of 2i57 by Molmil
Crystal Structure of L-Rhamnose Isomerase from Pseudomonas stutzeri in Complex with D-Allose
分子名称: D-ALLOSE, L-rhamnose isomerase, ZINC ION
著者Yoshida, H, Yamada, M, Takada, G, Izumori, K, Kamitori, S.
登録日2006-08-24
公開日2006-12-19
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献The Structures of l-Rhamnose Isomerase from Pseudomonas stutzeri in Complexes with l-Rhamnose and d-Allose Provide Insights into Broad Substrate Specificity
J.Mol.Biol., 365, 2007
2JUE
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BU of 2jue by Molmil
Solution structure of the all-D kalata B1
分子名称: Kalata-B1
著者Daly, N.L, Sando, L, Craik, D.
登録日2007-08-23
公開日2008-08-05
最終更新日2020-08-12
実験手法SOLUTION NMR
主引用文献A Synthetic mirror image of kalata B1 reveals that cyclotide activity is independent of a protein receptor.
Chembiochem, 12, 2011
2KQL
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BU of 2kql by Molmil
Maurocalcine in D configuration from Scorpio maurus palmatus
分子名称: D-MAUROCALCINE
著者Dridi, K, Bernard, C, Darbon, H.
登録日2009-11-11
公開日2010-07-07
最終更新日2022-03-16
実験手法SOLUTION NMR
主引用文献Maurocalcine in D configuration from Scorpio maurus palmatus
To be Published
4U8Z
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BU of 4u8z by Molmil
Crystal structure of MST3 with a pyrrolopyrimidine inhibitor (PF-06447475)
分子名称: 3-[4-(morpholin-4-yl)-7H-pyrrolo[2,3-d]pyrimidin-5-yl]benzonitrile, MANGANESE (II) ION, Serine/threonine-protein kinase 24
著者Jasti, J, Song, X, Griffor, M, Kurumbail, R.G.
登録日2014-08-05
公開日2015-03-18
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献Discovery and preclinical profiling of 3-[4-(morpholin-4-yl)-7H-pyrrolo[2,3-d]pyrimidin-5-yl]benzonitrile (PF-06447475), a highly potent, selective, brain penetrant, and in vivo active LRRK2 kinase inhibitor.
J.Med.Chem., 58, 2015
4U2Y
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BU of 4u2y by Molmil
Sco GlgEI-V279S in Complex with Reaction Intermediate Azasugar
分子名称: (2R,3R,4R,5R)-4-hydroxy-2,5-bis(hydroxymethyl)pyrrolidin-3-yl alpha-D-glucopyranoside, Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase 1
著者Ronning, D.R, Lindenberger, J.J.
登録日2014-07-18
公開日2015-08-12
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.483 Å)
主引用文献Crystal structures of Mycobacterium tuberculosis GlgE and complexes with non-covalent inhibitors.
Sci Rep, 5, 2015
4UDJ
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BU of 4udj by Molmil
Crystal structure of b-1,4-mannopyranosyl-chitobiose phosphorylase at 1.60 Angstrom in complex with beta-D-mannopyranose and inorganic phosphate
分子名称: 1,2-ETHANEDIOL, PHOSPHATE ION, POTASSIUM ION, ...
著者Ladeveze, S, Cioci, G, Potocki-Veronese, G, Tranier, S, Mourey, L.
登録日2014-12-10
公開日2015-05-27
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Structural Bases for N-Glycan Processing by Mannoside Phosphorylase.
Acta Crystallogr.,Sect.D, 71, 2015
4U31
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Sco GlgEI-V279S in Complex with maltose-C-phosphonate
分子名称: 1,2-ETHANEDIOL, Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase 1, CITRIC ACID, ...
著者Ronning, D.R, Lindenberger, J.J.
登録日2014-07-18
公開日2015-07-22
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.849 Å)
主引用文献Crystal structures of Mycobacterium tuberculosis GlgE and complexes with non-covalent inhibitors.
Sci Rep, 5, 2015
4U33
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BU of 4u33 by Molmil
Structure of Mtb GlgE bound to maltose
分子名称: Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者Ronning, D.R, Lindenberger, J.J.
登録日2014-07-18
公開日2015-07-22
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (3.293 Å)
主引用文献Crystal structures of Mycobacterium tuberculosis GlgE and complexes with non-covalent inhibitors.
Sci Rep, 5, 2015
4U3C
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BU of 4u3c by Molmil
Docking Site of Maltohexaose in the Mtb GlgE
分子名称: Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者Ronning, D.R, Lindenberger, J.J.
登録日2014-07-19
公開日2015-07-22
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (3.98 Å)
主引用文献Crystal structures of Mycobacterium tuberculosis GlgE and complexes with non-covalent inhibitors.
Sci Rep, 5, 2015
4WM9
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Acinetobacter baumanii OXA-24 complex with Avibactam
分子名称: (2S,5R)-1-formyl-5-[(sulfooxy)amino]piperidine-2-carboxamide, 1,2-ETHANEDIOL, Beta-lactamase, ...
著者Mangani, S, Benvenuti, M, Docquier, J.-D.
登録日2014-10-08
公開日2014-12-03
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Molecular Basis of Selective Inhibition and Slow Reversibility of Avibactam against Class D Carbapenemases: A Structure-Guided Study of OXA-24 and OXA-48.
Acs Chem.Biol., 10, 2015
4WMC
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OXA-48 covalent complex with Avibactam inhibitor
分子名称: (2S,5R)-1-formyl-5-[(sulfooxy)amino]piperidine-2-carboxamide, Beta-lactamase, CARBON DIOXIDE
著者Mangani, S, Benvenuti, M, Docquier, J.D.
登録日2014-10-08
公開日2014-12-03
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Molecular Basis of Selective Inhibition and Slow Reversibility of Avibactam against Class D Carbapenemases: A Structure-Guided Study of OXA-24 and OXA-48.
Acs Chem.Biol., 10, 2015
6Q1D
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BU of 6q1d by Molmil
Holo YfeA reconstituted by zinc soaking
分子名称: Periplasmic chelated iron-binding protein YfeA, ZINC ION
著者Radka, C.D, Labiuk, S.L, DeLucas, L.J, Aller, S.G.
登録日2019-08-03
公開日2019-09-04
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Structures of the substrate-binding protein YfeA in apo and zinc-reconstituted holo forms.
Acta Crystallogr D Struct Biol, 75, 2019
7AM6
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BU of 7am6 by Molmil
Crystal structure of Peptiligase mutant - L217H/M222P/A225N/F189W
分子名称: D(-)-TARTARIC ACID, GLYCEROL, LEU-PRO-GLU-GLY-SER-PRO-VAL-THR-ASP-LEU-ARG-TYR, ...
著者Rozeboom, H.J, Janssen, D.J.
登録日2020-10-08
公開日2021-02-17
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献From thiol-subtilisin to omniligase: Design and structure of a broadly applicable peptide ligase.
Comput Struct Biotechnol J, 19, 2021
2BO8
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DISSECTION OF MANNOSYLGLYCERATE SYNTHASE: AN ARCHETYPAL MANNOSYLTRANSFERASE
分子名称: CHLORIDE ION, GUANOSINE 5'-(TRIHYDROGEN DIPHOSPHATE), P'-D-MANNOPYRANOSYL ESTER, ...
著者Flint, J, Taylor, E, Yang, M, Bolam, D.N, Tailford, L.E, Martinez-Fleites, C, Dodson, E.J, Davis, B.G, Gilbert, H.J, Davies, G.J.
登録日2005-04-08
公開日2005-06-06
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural dissection and high-throughput screening of mannosylglycerate synthase.
Nat. Struct. Mol. Biol., 12, 2005
4KSH
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BU of 4ksh by Molmil
Dna gyrase atp binding domain of enterococcus faecalis in complex with a small molecule inhibitor (7-({4-[(3R)-3-AMINOPYRROLIDIN-1-YL]-5-CHLORO-6-ETHYL-7H-PYRROLO[2,3-D]PYRIMIDIN-2-YL}SULFANYL)-1,5-NAPHTHYRIDIN-1(4H)-OL)
分子名称: 7-({4-[(3R)-3-aminopyrrolidin-1-yl]-5-chloro-6-ethyl-7H-pyrrolo[2,3-d]pyrimidin-2-yl}sulfanyl)-1,5-naphthyridin-1(4H)-ol, DNA gyrase subunit B, GLYCEROL
著者Bensen, D.C, Akers-Rodriguez, S, Tari, L.W.
登録日2013-05-17
公開日2014-01-15
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献A new class of type iia topoisomerase inhibitors with broad-spectrum antibacterial activity
To be Published
1S2J
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Crystal structure of the Drosophila pattern-recognition receptor PGRP-SA
分子名称: PHOSPHATE ION, Peptidoglycan recognition protein SA CG11709-PA
著者Chang, C.-I, Pili-Floury, S, Chelliah, Y, Lemaitre, B, Mengin-Lecreulx, D, Deisenhofer, J.
登録日2004-01-08
公開日2004-09-14
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献A Drosophila pattern recognition receptor contains a peptidoglycan docking groove and unusual l,d-carboxypeptidase activity.
PLOS BIOL., 2, 2004
7AEN
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Galectin-8 N-terminal carbohydrate recognition domain in complex with methyl 3-O-((7-carboxy)quinolin-2-yl)-methoxy)-beta-D-galactopyranoside
分子名称: CHLORIDE ION, GLYCEROL, Isoform 2 of Galectin-8, ...
著者Hassan, M, Klavern, V.S, Hakansson, M, Anderluh, M, Tomasic, T, Jakopin, Z, Nilsson, J.U, Kovacic, R, Walse, B, Diehl, C.
登録日2020-09-17
公開日2021-07-28
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structure-Guided Design of d-Galactal Derivatives with High Affinity and Selectivity for the Galectin-8 N-Terminal Domain
Acs Med.Chem.Lett., 12, 2021

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