PDB: 46984 件ウェブページステータス検索Chemie searchBIRD

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8D8L	Yeast mitochondrial small subunit assembly intermediate (State 3) 分子名称: 15S ribosomal RNA, 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial, ... 著者 Burnside, C, Harper, N, Klinge, S. 登録日 2022-06-08 公開日 2022-12-14 最終更新日 2023-02-15 実験手法 ELECTRON MICROSCOPY (2.6 Å) 主引用文献 Principles of mitoribosomal small subunit assembly in eukaryotes. Nature, 614, 2023
8CSP	Human mitochondrial small subunit assembly intermediate (State A) 分子名称: 12S mitochondrial rRNA, 28S ribosomal protein S10, mitochondrial, ... 著者 Harper, N.J, Burnside, C, Klinge, S. 登録日 2022-05-13 公開日 2022-12-14 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (2.66 Å) 主引用文献 Principles of mitoribosomal small subunit assembly in eukaryotes. Nature, 614, 2023
8CSQ	Human mitochondrial small subunit assembly intermediate (State B) 分子名称: 12S mitochondrial rRNA, 28S ribosomal protein S10, mitochondrial, ... 著者 Harper, N.J, Burnside, C, Klinge, S. 登録日 2022-05-13 公開日 2022-12-14 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (2.54 Å) 主引用文献 Principles of mitoribosomal small subunit assembly in eukaryotes. Nature, 614, 2023
8CSU	Human mitochondrial small subunit assembly intermediate (State C*) 分子名称: 12S mitochondrial rRNA, 28S ribosomal protein S10, mitochondrial, ... 著者 Harper, N.J, Burnside, C, Klinge, S. 登録日 2022-05-13 公開日 2022-12-14 最終更新日 2023-02-08 実験手法 ELECTRON MICROSCOPY (3.03 Å) 主引用文献 Principles of mitoribosomal small subunit assembly in eukaryotes. Nature, 614, 2023
8CST	Human mitochondrial small subunit assembly intermediate (State E) 分子名称: 12S mitochondrial rRNA, 28S ribosomal protein S10, mitochondrial, ... 著者 Harper, N.J, Burnside, C, Klinge, S. 登録日 2022-05-13 公開日 2022-12-14 最終更新日 2023-02-08 実験手法 ELECTRON MICROSCOPY (2.85 Å) 主引用文献 Principles of mitoribosomal small subunit assembly in eukaryotes. Nature, 614, 2023
8DBS	E. coli ATP synthase imaged in 10mM MgATP State2 "half-up" Fo classified 分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase epsilon chain, ... 著者 Sobti, M, Stewart, A.G. 登録日 2022-06-14 公開日 2023-01-25 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Changes within the central stalk of E. coli F 1 F o ATP synthase observed after addition of ATP. Commun Biol, 6, 2023
8DBQ	E. coli ATP synthase imaged in 10mM MgATP State1 "half-up" Fo classified 分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase epsilon chain, ... 著者 Sobti, M, Stewart, A.G. 登録日 2022-06-14 公開日 2023-01-25 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (4 Å) 主引用文献 Changes within the central stalk of E. coli F 1 F o ATP synthase observed after addition of ATP. Commun Biol, 6, 2023
8CWO	Cutibacterium acnes 30S ribosomal subunit with Sarecycline bound, body domain only in the local refined map 分子名称: 16S ribosomal RNA, 30S ribosomal protein S11, 30S ribosomal protein S12, ... 著者 Lomakin, I.B, Devarkar, S.C, Bunick, C.G. 登録日 2022-05-19 公開日 2023-03-15 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (2.84 Å) 主引用文献 Sarecycline inhibits protein translation in Cutibacterium acnes 70S ribosome using a two-site mechanism. Nucleic Acids Res., 51, 2023
2IBB	Crystal Structure of the First and Second FNIII Domains of Ihog 分子名称: CG9211-PA, SULFATE ION 著者 McLellan, J.S, Leahy, D.J. 登録日 2006-09-11 公開日 2006-10-24 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structure of a heparin-dependent complex of Hedgehog and Ihog. Proc.Natl.Acad.Sci.Usa, 103, 2006
6KOP	Mycobacterium tuberculosis initial transcription complex comprising sigma H and 5'-OH RNA of 9 nt 分子名称: DNA (5'-D(*TP*GP*CP*AP*TP*CP*CP*GP*TP*GP*AP*GP*TP*CP*GP*AP*GP*GP*GP*TP*G)-3'), DNA (5'-D(*TP*TP*GP*TP*GP*GP*GP*AP*GP*CP*TP*GP*TP*CP*AP*CP*GP*GP*AP*TP*GP*CP*A)-3'), DNA-directed RNA polymerase subunit alpha, ... 著者 Li, L, Zhang, Y. 登録日 2019-08-12 公開日 2020-03-11 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (3.303 Å) 主引用文献 RNA extension drives a stepwise displacement of an initiation-factor structural module in initial transcription. Proc.Natl.Acad.Sci.USA, 117, 2020
2FTQ	E. coli thymidylate synthase at 1.8 A resolution 分子名称: PHOSPHATE ION, SULFATE ION, Thymidylate synthase 著者 Montfort, W.R, Roberts, S.A. 登録日 2006-01-24 公開日 2006-05-02 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.81 Å) 主引用文献 Subtle Conformational Differences between Escherichia coli Thymidylate Synthase and Specific Mutants of this Enzyme To be Published
1VY4	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites. 分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ... 著者 Polikanov, Y.S, Steitz, T.A, Innis, C.A. 登録日 2014-05-13 公開日 2014-08-20 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 A proton wire to couple aminoacyl-tRNA accommodation and peptide-bond formation on the ribosome. Nat.Struct.Mol.Biol., 21, 2014
1VY7	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site. 分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ... 著者 Polikanov, Y.S, Steitz, T.A, Innis, C.A. 登録日 2014-05-13 公開日 2014-08-20 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 A proton wire to couple aminoacyl-tRNA accommodation and peptide-bond formation on the ribosome. Nat.Struct.Mol.Biol., 21, 2014
2I54	Phosphomannomutase from Leishmania mexicana 分子名称: CHLORIDE ION, CITRIC ACID, MAGNESIUM ION, ... 著者 Smith, B.J. 登録日 2006-08-24 公開日 2007-04-17 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structure of Leishmania mexicana phosphomannomutase highlights similarities with human isoforms J.Mol.Biol., 363, 2006
1VY5	Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site. 分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ... 著者 Polikanov, Y.S, Steitz, T.A, Innis, C.A. 登録日 2014-05-13 公開日 2014-08-20 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.55 Å) 主引用文献 A proton wire to couple aminoacyl-tRNA accommodation and peptide-bond formation on the ribosome. Nat.Struct.Mol.Biol., 21, 2014
8E9I	Mycobacterial respiratory complex I, semi-inserted quinone 分子名称: (2R)-3-{[(R)-hydroxy({(1S,2R,3R,4R,5S,6S)-3,4,5-trihydroxy-2-(alpha-D-mannopyranosyloxy)-6-[(6-O-undecanoyl-beta-D-mannopyranosyl)oxy]cyclohexyl}oxy)phosphoryl]oxy}-2-(octanoyloxy)propyl undecanoate, FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, ... 著者 Liang, Y, Rubinstein, J.L. 登録日 2022-08-26 公開日 2022-10-12 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (2.8 Å) 主引用文献 Structure of mycobacterial respiratory complex I. Proc.Natl.Acad.Sci.USA, 120, 2023
8E9H	Mycobacterial respiratory complex I, fully-inserted quinone 分子名称: (2R)-3-{[(R)-hydroxy({(1S,2R,3R,4R,5S,6S)-3,4,5-trihydroxy-2-(alpha-D-mannopyranosyloxy)-6-[(6-O-undecanoyl-beta-D-mannopyranosyl)oxy]cyclohexyl}oxy)phosphoryl]oxy}-2-(octanoyloxy)propyl undecanoate, FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, ... 著者 Liang, Y, Rubinstein, J.L. 登録日 2022-08-26 公開日 2022-10-12 最終更新日 2023-04-05 実験手法 ELECTRON MICROSCOPY (2.7 Å) 主引用文献 Structure of mycobacterial respiratory complex I. Proc.Natl.Acad.Sci.USA, 120, 2023
8E9G	Mycobacterial respiratory complex I with both quinone positions modelled 分子名称: (2R)-3-{[(R)-hydroxy({(1S,2R,3R,4R,5S,6S)-3,4,5-trihydroxy-2-(alpha-D-mannopyranosyloxy)-6-[(6-O-undecanoyl-beta-D-mannopyranosyl)oxy]cyclohexyl}oxy)phosphoryl]oxy}-2-(octanoyloxy)propyl undecanoate, FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, ... 著者 Liang, Y, Rubinstein, J.L. 登録日 2022-08-26 公開日 2022-10-12 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (2.6 Å) 主引用文献 Structure of mycobacterial respiratory complex I. Proc.Natl.Acad.Sci.USA, 120, 2023
2H1L	The Structure of the Oncoprotein SV40 Large T Antigen and p53 Tumor Suppressor Complex 分子名称: Cellular tumor antigen p53, Large T antigen, ZINC ION 著者 Lilyestrom, W, Klein, M.G, Chen, X.S. 登録日 2006-05-16 公開日 2006-09-12 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (3.16 Å) 主引用文献 Crystal structure of SV40 large T-antigen bound to p53: interplay between a viral oncoprotein and a cellular tumor suppressor. Genes Dev., 20, 2006
1VVJ	Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the Ribosome 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Maehigashi, T, Dunkle, J.A, Dunham, C.M. 登録日 2013-05-24 公開日 2014-08-06 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (3.440001 Å) 主引用文献 Structural insights into +1 frameshifting promoted by expanded or modification-deficient anticodon stem loops. Proc.Natl.Acad.Sci.USA, 111, 2014
8EEY	Cas7-11 in complex with DR-mismatched target RNA, Csx29 and Csx30 分子名称: Cas7-11, Csx29, Csx30, ... 著者 Demircioglu, F.E, Wilkinson, M.E, Strecker, J, Li, D, Faure, G, Macrae, R.K, Zhang, F. 登録日 2022-09-07 公開日 2022-11-16 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (2.53 Å) 主引用文献 RNA-activated protein cleavage with a CRISPR-associated endopeptidase. Science, 378, 2022
1VY6	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site. 分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ... 著者 Polikanov, Y.S, Steitz, T.A, Innis, C.A. 登録日 2014-05-13 公開日 2014-08-20 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 A proton wire to couple aminoacyl-tRNA accommodation and peptide-bond formation on the ribosome. Nat.Struct.Mol.Biol., 21, 2014
2IJI	Structure of F14H mutant of ColE1 Rom protein 分子名称: Regulatory protein rop 著者 Struble, E.B. 登録日 2006-09-29 公開日 2007-10-16 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 New crystal structures of ColE1 Rom and variants resulting from mutation of a surface exposed residue: Implications for RNA-recognition. Proteins, 72, 2008
8E2S	Crystal structure of TadAC-1.19 分子名称: ZINC ION, tRNA-specific adenosine deaminase 1.19 著者 Feliciano, P.R, Lee, S.J, Ciaramella, G. 登録日 2022-08-15 公開日 2023-01-11 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.95 Å) 主引用文献 Improved cytosine base editors generated from TadA variants. Nat.Biotechnol., 41, 2023
6KW5	The ClassC RSC-Nucleosome Complex 分子名称: Actin-like protein ARP9, Actin-related protein 7, Chromatin structure-remodeling complex protein RSC3, ... 著者 Ye, Y.P, Wu, H, Chen, K.J, Verma, N, Cairns, B, Gao, N, Chen, Z.C. 登録日 2019-09-06 公開日 2020-09-09 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (10.13 Å) 主引用文献 Structure of the RSC complex bound to the nucleosome To Be Published

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