Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7KHR
DownloadVisualize
BU of 7khr by Molmil
Cryo-EM structure of bafilomycin A1-bound intact V-ATPase from bovine brain
分子名称: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, (5R)-2,4-dideoxy-1-C-{(2S,3R,4S)-3-hydroxy-4-[(2R,3S,4E,6E,9R,10S,11R,12E,14Z)-10-hydroxy-3,15-dimethoxy-7,9,11,13-tetramethyl-16-oxo-1-oxacyclohexadeca-4,6,12,14-tetraen-2-yl]pentan-2-yl}-4-methyl-5-propan-2-yl-alpha-D-threo-pentopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Wang, R, Li, X.
登録日2020-10-21
公開日2021-03-17
最終更新日2021-09-29
実験手法ELECTRON MICROSCOPY (3.62 Å)
主引用文献Molecular basis of V-ATPase inhibition by bafilomycin A1.
Nat Commun, 12, 2021
2N58
DownloadVisualize
BU of 2n58 by Molmil
Structure of an N-terminal membrane-anchoring region of the glycosyltransferase WaaG
分子名称: Lipopolysaccharide core biosynthesis protein RfaG
著者Liebau, J, Pettersson, P, Szpryngiel, S, Maler, L.
登録日2015-07-13
公開日2015-08-19
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Membrane Interaction of the Glycosyltransferase WaaG.
Biophys.J., 109, 2015
2MZZ
DownloadVisualize
BU of 2mzz by Molmil
NMR structure of APOBEC3G NTD variant, sNTD
分子名称: Apolipoprotein B mRNA-editing enzyme, catalytic polypeptide-like 3G variant, ZINC ION
著者Kouno, T, Luengas, E.M, Shigematu, M, Shandilya, S.M.D, Zhang, J, Chen, L, Hara, M, Schiffer, C.A, Harris, R.S, Matsuo, H.
登録日2015-02-28
公開日2015-05-13
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structure of the Vif-binding domain of the antiviral enzyme APOBEC3G.
Nat.Struct.Mol.Biol., 22, 2015
2N1G
DownloadVisualize
BU of 2n1g by Molmil
Structure of C-terminal domain of human polymerase Rev1 in complex with PolD3 RIR-motif
分子名称: DNA polymerase delta subunit 3, DNA repair protein REV1
著者Pustovalova, Y, Korzhnev, D.
登録日2015-04-01
公開日2016-04-13
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Interaction between the Rev1 C-Terminal Domain and the PolD3 Subunit of Pol zeta Suggests a Mechanism of Polymerase Exchange upon Rev1/Pol zeta-Dependent Translesion Synthesis.
Biochemistry, 55, 2016
6J6L
DownloadVisualize
BU of 6j6l by Molmil
Crystal structure of mouse Ryanodine Receptor 2 SPRY1 Domain (650-844) disease mutant I784F
分子名称: ISOPROPYL ALCOHOL, Ryanodine receptor 2
著者Ma, R, Lin, L, Yuchi, Z.
登録日2019-01-15
公開日2020-01-15
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.452 Å)
主引用文献A SPRY1 domain cardiac ryanodine receptor variant associated with short-coupled torsade de pointes.
Sci Rep, 11, 2021
6J72
DownloadVisualize
BU of 6j72 by Molmil
Crystal structure of IniA from Mycobacterium smegmatis with GTP bound
分子名称: GUANOSINE-5'-TRIPHOSPHATE, Isoniazid inducible gene protein IniA, L(+)-TARTARIC ACID, ...
著者Wang, M.F, Guo, X.Y, Hu, J.J, Li, J, Rao, Z.H.
登録日2019-01-16
公開日2019-09-11
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Mycobacterial dynamin-like protein IniA mediates membrane fission.
Nat Commun, 10, 2019
6JCR
DownloadVisualize
BU of 6jcr by Molmil
AAV1 in neutral condition at 3.07 Ang
分子名称: Capsid protein
著者Lou, Z, Zhang, R.
登録日2019-01-30
公開日2019-10-23
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.07 Å)
主引用文献Divergent engagements between adeno-associated viruses with their cellular receptor AAVR.
Nat Commun, 10, 2019
2O2K
DownloadVisualize
BU of 2o2k by Molmil
Crystal Structure of the Activation Domain of Human Methionine Synthase Isoform/Mutant D963E/K1071N
分子名称: Methionine synthase
著者Wolthers, K.R, Toogood, H.S, Jowitt, T.A, Marshall, K.R, Leys, D, Scrutton, N.S.
登録日2006-11-30
公開日2006-12-19
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure and solution characterization of the activation domain of human methionine synthase
Febs J., 274, 2007
4D7X
DownloadVisualize
BU of 4d7x by Molmil
Solution Structure of the Mediator Gall11 KIX Domain of C. Glabrata
分子名称: MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15
著者Boeszoermenyi, A, Wagner, G, Naar, A.M, Arthanari, H.
登録日2014-11-30
公開日2015-12-09
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Inhibiting Fungal Multidrug Resistance by Disrupting an Activator-Mediator Interaction.
Nature, 530, 2016
7JP2
DownloadVisualize
BU of 7jp2 by Molmil
Crystal structure of TP0037 from Treponema pallidum, a D-lactate dehydrogenase
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, D-lactate dehydrogenase
著者Brautigam, C.A, Deka, R.K, Norgard, M.V.
登録日2020-08-07
公開日2020-09-09
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.38 Å)
主引用文献Biophysical and Biochemical Characterization of TP0037, a d-Lactate Dehydrogenase, Supports an Acetogenic Energy Conservation Pathway in Treponema pallidum.
Mbio, 11, 2020
7JW2
DownloadVisualize
BU of 7jw2 by Molmil
Crystal structure of Aedes aegypti Nibbler EXO domain
分子名称: Exonuclease mut-7 homolog
著者Xie, W, Sowemimo, I, Hayashi, R, Wang, J, Brennecke, J, Ameres, S.L, Patel, D.J.
登録日2020-08-24
公開日2021-01-20
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structure-function analysis of microRNA 3'-end trimming by Nibbler.
Proc.Natl.Acad.Sci.USA, 117, 2020
8IC9
DownloadVisualize
BU of 8ic9 by Molmil
Lys48-linked K48C-diubiquitin
分子名称: Polyubiquitin-B, Ubiquitin
著者Hiranyakorn, M, Yagi-Utsumi, M, Yanaka, S, Ohtsuka, N, Momiyama, N, Satoh, T, Kato, K.
登録日2023-02-11
公開日2023-04-26
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Mutational and Environmental Effects on the Dynamic Conformational Distributions of Lys48-Linked Ubiquitin Chains.
Int J Mol Sci, 24, 2023
8IQU
DownloadVisualize
BU of 8iqu by Molmil
Structure of MtbFadD23 with PhU-AMS
分子名称: 5'-O-[(11-phenoxyundecanoyl)sulfamoyl]adenosine, Fatty-acid-CoA ligase FadD23
著者Yan, M.R, Zhang, W.
登録日2023-03-17
公開日2023-04-26
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.64 Å)
主引用文献Structural basis for the development of potential inhibitors targeting FadD23 from Mycobacterium tuberculosis.
Acta Crystallogr.,Sect.F, 79, 2023
6B45
DownloadVisualize
BU of 6b45 by Molmil
Cryo-EM structure of Type I-F CRISPR crRNA-guided Csy surveillance complex
分子名称: CRISPR-associated endonuclease Cas6/Csy4, CRISPR-associated protein Csy1, CRISPR-associated protein Csy2, ...
著者Guo, T.W, Bartesaghi, A, Yang, H, Falconieri, V, Rao, P, Merk, A, Fox, T, Earl, L, Patel, D.J, Subramaniam, S.
登録日2017-09-25
公開日2017-10-18
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Cryo-EM Structures Reveal Mechanism and Inhibition of DNA Targeting by a CRISPR-Cas Surveillance Complex.
Cell, 171, 2017
2BZ8
DownloadVisualize
BU of 2bz8 by Molmil
N-terminal Sh3 domain of CIN85 bound to Cbl-b peptide
分子名称: SH3-DOMAIN KINASE BINDING PROTEIN 1, SIGNAL TRANSDUCTION PROTEIN CBL-B SH3-BINDING PROTEIN CBL-B, RING FINGER PROTEIN 56, ...
著者Cardenes, N, Moncalian, G, Bravo, J.
登録日2005-08-12
公開日2005-10-05
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Cbl Promotes Clustering of Endocytic Adaptor Proteins
Nat.Struct.Mol.Biol., 12, 2005
4BUU
DownloadVisualize
BU of 4buu by Molmil
Crystal structure of human tankyrase 2 in complex with (4-(4-oxo-3,4- dihydroquinazolin-2-yl)phenyl)methanesulfonamide
分子名称: DI(HYDROXYETHYL)ETHER, GLYCEROL, SULFATE ION, ...
著者Haikarainen, T, Narwal, M, Lehtio, L.
登録日2013-06-24
公開日2013-10-30
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Para-Substituted 2-Phenyl-3,4-Dihydroquinazolin-4-Ones as Potent and Selective Tankyrase Inhibitors.
Chemmedchem, 8, 2013
4BS4
DownloadVisualize
BU of 4bs4 by Molmil
Crystal structure of human tankyrase 2 in complex with 4'-isopropylflavone
分子名称: 4'-ISOPROPYLFLAVONE, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Haikarainen, T, Narwal, M, Lehtio, L.
登録日2013-06-07
公開日2013-10-30
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Discovery of Tankyrase Inhibiting Flavones with Increased Potency and Isoenzyme Selectivity.
J.Med.Chem., 56, 2013
4BU9
DownloadVisualize
BU of 4bu9 by Molmil
Crystal structure of human tankyrase 2 in complex with 2-(4- methoxyphenyl)-3,4-dihydroquinazolin-4-one
分子名称: 2-(4-methoxyphenyl)-3,4-dihydroquinazolin-4-one, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Haikarainen, T, Narwal, M, Lehtio, L.
登録日2013-06-20
公開日2013-10-30
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Para-Substituted 2-Phenyl-3,4-Dihydroquinazolin-4-Ones as Potent and Selective Tankyrase Inhibitors.
Chemmedchem, 8, 2013
2OCG
DownloadVisualize
BU of 2ocg by Molmil
Crystal structure of human valacyclovir hydrolase
分子名称: GLYCEROL, MAGNESIUM ION, MANGANESE (II) ION, ...
著者Lai, L, Xu, Z, Amidon, G.L.
登録日2006-12-20
公開日2008-02-05
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Molecular basis of prodrug activation by human valacyclovirase, an alpha-amino acid ester hydrolase.
J.Biol.Chem., 283, 2008
4FZZ
DownloadVisualize
BU of 4fzz by Molmil
Exonuclease X in complex with 5' overhanging duplex DNA
分子名称: DNA (5'-D(*GP*TP*CP*AP*TP*TP*GP*TP*GP*GP*AP*TP*CP*CP*GP*AP*G)-3'), Exodeoxyribonuclease 10, SODIUM ION
著者Wang, T, Sun, H, Cheng, F, Bi, L, Jiang, T.
登録日2012-07-08
公開日2013-07-03
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Recognition and processing of double-stranded DNA by ExoX, a distributive 3'-5' exonuclease
Nucleic Acids Res., 41, 2013
6HWV
DownloadVisualize
BU of 6hwv by Molmil
Crystal structure of p38alpha in complex with a photoswitchable 2-Azoimidazol-based Inhibitor (compound 3)
分子名称: 3-(2,5-dimethoxyphenyl)-~{N}-[4-[5-(4-fluorophenyl)-2-[(~{E})-(4-fluorophenyl)diazenyl]-3-methyl-imidazol-4-yl]pyridin-2-yl]propanamide, Mitogen-activated protein kinase 14, octyl beta-D-glucopyranoside
著者Mueller, M.P, Rauh, D.
登録日2018-10-15
公開日2019-04-17
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献2-Azo-, 2-diazocine-thiazols and 2-azo-imidazoles as photoswitchable kinase inhibitors: limitations and pitfalls of the photoswitchable inhibitor approach.
Photochem. Photobiol. Sci., 18, 2019
7JNY
DownloadVisualize
BU of 7jny by Molmil
Crystal structure of CXCL13
分子名称: C-X-C motif chemokine 13
著者Rosenberg Jr, E.M, Rajasekaran, D, Murphy, J.W, Pantouris, G, Lolis, E.J.
登録日2020-08-05
公開日2020-10-07
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献The N-terminal length and side-chain composition of CXCL13 affect crystallization, structure and functional activity.
Acta Crystallogr D Struct Biol, 76, 2020
1KOO
DownloadVisualize
BU of 1koo by Molmil
THE CRYSTAL STRUCTURE AND MUTATIONAL ANALYSIS OF A NOVEL RNA-BINDING DOMAIN FOUND IN THE HUMAN TAP NUCLEAR MRNA EXPORT FACTOR
分子名称: TIP ASSOCIATING PROTEIN
著者Ho, D.N, Coburn, G.A, Kang, Y, Cullen, B.R, Georgiadis, M.M.
登録日2001-12-21
公開日2002-02-27
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (3.8 Å)
主引用文献The crystal structure and mutational analysis of a novel RNA-binding domain found in the human Tap nuclear mRNA export factor.
Proc.Natl.Acad.Sci.USA, 99, 2002
4XRR
DownloadVisualize
BU of 4xrr by Molmil
Crystal structure of cals8 from micromonospora echinospora (P294S mutant)
分子名称: CalS8, GLYCEROL
著者Michalska, K, Bigelow, L, Endres, M, Babnigg, G, Bingman, C.A, Yennamalli, R.M, Singh, S, Kharel, M.K, Thorson, J.S, Phillips Jr, G.N, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Enzyme Discovery for Natural Product Biosynthesis (NatPro)
登録日2015-01-21
公開日2015-02-11
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Structural Characterization of CalS8, a TDP-alpha-D-Glucose Dehydrogenase Involved in Calicheamicin Aminodideoxypentose Biosynthesis.
J. Biol. Chem., 290, 2015
6B47
DownloadVisualize
BU of 6b47 by Molmil
Cryo-EM structure of Type I-F CRISPR crRNA-guided Csy surveillance complex with bound anti-CRISPR protein AcrF2
分子名称: Anti-CRISPR protein AcrF2, CRISPR-associated endonuclease Cas6/Csy4, CRISPR-associated protein Csy1, ...
著者Guo, T.W, Bartesaghi, A, Yang, H, Falconieri, V, Rao, P, Merk, A, Fox, T, Earl, L, Patel, D.J, Subramaniam, S.
登録日2017-09-25
公開日2017-10-18
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Cryo-EM Structures Reveal Mechanism and Inhibition of DNA Targeting by a CRISPR-Cas Surveillance Complex.
Cell, 171, 2017

222415

件を2024-07-10に公開中

PDB statisticsPDBj update infoContact PDBjnumon