Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5SVG
DownloadVisualize
BU of 5svg by Molmil
Structure and kinetics of the LOV domain of ZEITLUPE determine its circadian function in Arabidopsis
分子名称: Adagio protein 1, FLAVIN MONONUCLEOTIDE
著者Zoltowski, B, Pudasaini, A.
登録日2016-08-05
公開日2017-03-08
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Kinetics of the LOV domain of ZEITLUPE determine its circadian function inArabidopsis.
Elife, 6, 2017
7WVA
DownloadVisualize
BU of 7wva by Molmil
Crystal structure of mouse Cryptochrome 1 in complex with TH401 compound
分子名称: 2-(1-methylbenzimidazol-2-yl)sulfanyl-N-[(E)-(2,3,4-trimethoxyphenyl)methylideneamino]ethanamide, Cryptochrome-1
著者Miller, S.A, Hirota, T.
登録日2022-02-10
公開日2022-09-07
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献A methylbenzimidazole derivative regulates mammalian circadian rhythms by targeting Cryptochrome proteins.
F1000Res, 11, 2022
8OSK
DownloadVisualize
BU of 8osk by Molmil
Cryo-EM structure of CLOCK-BMAL1 bound to a nucleosomal E-box at position SHL+5.8 (composite map)
分子名称: Basic helix-loop-helix ARNT-like protein 1, Circadian locomoter output cycles protein kaput, DNA (124-MER), ...
著者Stoos, L, Michael, A.K, Kempf, G, Cavadini, S, Thoma, N.H.
登録日2023-04-19
公開日2023-05-24
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Cooperation between bHLH transcription factors and histones for DNA access.
Nature, 619, 2023
8OSL
DownloadVisualize
BU of 8osl by Molmil
Cryo-EM structure of CLOCK-BMAL1 bound to the native Por enhancer nucleosome (map 2, additional 3D classification and flexible refinement)
分子名称: Basic helix-loop-helix ARNT-like protein 1, Circadian locomoter output cycles protein kaput, DNA (147-MER), ...
著者Michael, A.K, Stoos, L, Kempf, G, Cavadini, S, Thoma, N.
登録日2023-04-19
公開日2023-05-24
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (4.9 Å)
主引用文献Cooperation between bHLH transcription factors and histones for DNA access.
Nature, 619, 2023
5YZ8
DownloadVisualize
BU of 5yz8 by Molmil
Crystal Structure of N-terminal C1 domain of KaiC
分子名称: CHLORIDE ION, Circadian Clock Protein Kinase KaiC, MAGNESIUM ION, ...
著者Mukaiyama, A, Furuike, Y, Abe, J, Akiyama, S.
登録日2017-12-13
公開日2019-01-30
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.81 Å)
主引用文献Conformational rearrangements of the C1 ring in KaiC measure the timing of assembly with KaiB.
Sci Rep, 8, 2018
8OSJ
DownloadVisualize
BU of 8osj by Molmil
Cryo-EM structure of CLOCK-BMAL1 bound to a nucleosomal E-box at position SHL-6.2 (DNA conformation 1)
分子名称: Basic helix-loop-helix ARNT-like protein 1, Circadian locomoter output cycles protein kaput, DNA (124-MER), ...
著者Michael, A.K, Stoos, L, Kempf, G, Cavadini, S, Thoma, N.H.
登録日2023-04-19
公開日2023-05-24
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (6.2 Å)
主引用文献Cooperation between bHLH transcription factors and histones for DNA access.
Nature, 619, 2023
6NF0
DownloadVisualize
BU of 6nf0 by Molmil
Nocturnin with bound NADPH substrate
分子名称: CALCIUM ION, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Nocturnin
著者Estrella, M.A, Du, J, Korennykh, A.
登録日2018-12-18
公開日2019-05-01
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献The metabolites NADP+and NADPH are the targets of the circadian protein Nocturnin (Curled).
Nat Commun, 10, 2019
8D7M
DownloadVisualize
BU of 8d7m by Molmil
Human Casein kinase 1 delta in complex with phosphorylated human PERIOD2 FASP peptide
分子名称: Casein kinase I isoform delta, Period circadian protein homolog 2 peptide
著者Philpott, J.M, Freeberg, A.M, Tripathi, S.M, Partch, C.L.
登録日2022-06-07
公開日2023-05-17
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献PERIOD phosphorylation leads to feedback inhibition of CK1 activity to control circadian period.
Mol.Cell, 83, 2023
8D7O
DownloadVisualize
BU of 8d7o by Molmil
Human Casein kinase 1 delta in complex with phosphorylated human PERIOD2 FASP peptide
分子名称: Casein kinase I isoform delta, Period circadian protein homolog 2 peptide
著者Philpott, J.M, Freeberg, A.M, Tripathi, S.M, Partch, C.L.
登録日2022-06-07
公開日2023-05-17
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献PERIOD phosphorylation leads to feedback inhibition of CK1 activity to control circadian period.
Mol.Cell, 83, 2023
8D7P
DownloadVisualize
BU of 8d7p by Molmil
Human Casein kinase 1 delta in complex with phosphorylated Drosophila PERIOD peptide
分子名称: Casein kinase I isoform delta, Period circadian protein peptide
著者Philpott, J.M, Freeberg, A.M, Tripathi, S.M, Partch, C.L.
登録日2022-06-07
公開日2023-05-17
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献PERIOD phosphorylation leads to feedback inhibition of CK1 activity to control circadian period.
Mol.Cell, 83, 2023
8D7N
DownloadVisualize
BU of 8d7n by Molmil
Human Casein kinase 1 delta in complex with phosphorylated human PERIOD2 FASP peptide
分子名称: Casein kinase I isoform delta, Period circadian protein homolog 2 peptide
著者Philpott, J.M, Freeberg, A.M, Tripathi, S.M, Partch, C.L.
登録日2022-06-07
公開日2023-05-17
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献PERIOD phosphorylation leads to feedback inhibition of CK1 activity to control circadian period.
Mol.Cell, 83, 2023
6A1C
DownloadVisualize
BU of 6a1c by Molmil
Crystal structure of the CK2a1-go289 complex
分子名称: 1,2-ETHANEDIOL, 5-bromanyl-2-methoxy-4-[(E)-(3-methylsulfanyl-5-phenyl-1,2,4-triazol-4-yl)iminomethyl]phenol, Casein kinase II subunit alpha, ...
著者Kinoshita, T, Tsuyuguchi, M.
登録日2018-06-07
公開日2019-03-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献Cell-based screen identifies a new potent and highly selective CK2 inhibitor for modulation of circadian rhythms and cancer cell growth.
Sci Adv, 5, 2019
5SVW
DownloadVisualize
BU of 5svw by Molmil
Light-state Structure of Arabidopsis Thaliana Zeitlupe
分子名称: Adagio protein 1, FLAVIN MONONUCLEOTIDE
著者Zoltowski, B, Pudasaini, A.
登録日2016-08-07
公開日2017-03-08
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献Kinetics of the LOV domain of ZEITLUPE determine its circadian function inArabidopsis.
Elife, 6, 2017
3RTY
DownloadVisualize
BU of 3rty by Molmil
Structure of an Enclosed Dimer Formed by The Drosophila Period Protein
分子名称: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, Period circadian protein
著者King, H.A, Hoelz, A, Crane, B.R, Young, M.W.
登録日2011-05-04
公開日2011-12-21
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Structure of an enclosed dimer formed by the Drosophila period protein.
J.Mol.Biol., 413, 2011
4K03
DownloadVisualize
BU of 4k03 by Molmil
Crystal structure of Drosophila Cryprochrome
分子名称: Cryptochrome-1, FLAVIN-ADENINE DINUCLEOTIDE
著者Berndt, A, Wolf, E.
登録日2013-04-03
公開日2013-06-26
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structures of Drosophila cryptochrome and mouse cryptochrome1 provide insight into circadian function.
Cell(Cambridge,Mass.), 153, 2013
4JZY
DownloadVisualize
BU of 4jzy by Molmil
Crystal structures of Drosophila Cryptochrome
分子名称: AMMONIUM ION, Cryptochrome-1, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Czarna, A, Wolf, E.
登録日2013-04-03
公開日2013-06-26
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.34 Å)
主引用文献Structures of Drosophila cryptochrome and mouse cryptochrome1 provide insight into circadian function.
Cell(Cambridge,Mass.), 153, 2013
3FY4
DownloadVisualize
BU of 3fy4 by Molmil
(6-4) Photolyase Crystal Structure
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 6-4 photolyase, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Hitomi, K, Arvai, A.S, Tainer, J.A, Getzoff, E.D.
登録日2009-01-21
公開日2009-04-28
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Functional motifs in the (6-4) photolyase crystal structure make a comparative framework for DNA repair photolyases and clock cryptochromes.
Proc.Natl.Acad.Sci.USA, 106, 2009
6PXN
DownloadVisualize
BU of 6pxn by Molmil
Human Casein Kinase 1 delta Tau mutant (R178C)
分子名称: Casein kinase I isoform delta, SULFATE ION
著者Philpott, J.M, Tripathi, S.M, Partch, C.L.
登録日2019-07-26
公開日2020-02-12
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.551 Å)
主引用文献Casein kinase 1 dynamics underlie substrate selectivity and the PER2 circadian phosphoswitch.
Elife, 9, 2020
4K0R
DownloadVisualize
BU of 4k0r by Molmil
Crystal structure of mouse Cryptochrome 1
分子名称: Cryptochrome-1
著者Czarna, A, Wolf, E.
登録日2013-04-04
公開日2013-06-26
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Structures of Drosophila cryptochrome and mouse cryptochrome1 provide insight into circadian function.
Cell(Cambridge,Mass.), 153, 2013
6PXP
DownloadVisualize
BU of 6pxp by Molmil
Human Casein Kinase 1 delta Site 2 mutant (K171E)
分子名称: Casein kinase I isoform delta, SULFATE ION
著者Yee, L, Philpott, J.M, Tripathi, S.M, Partch, C.L.
登録日2019-07-26
公開日2020-02-12
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Casein kinase 1 dynamics underlie substrate selectivity and the PER2 circadian phosphoswitch.
Elife, 9, 2020
5X17
DownloadVisualize
BU of 5x17 by Molmil
Crystal structure of murine CK1d in complex with ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, Casein kinase I isoform delta, SULFATE ION
著者Kikuchi, M, Shinohara, Y, Ueda, H.R, Umehara, T.
登録日2017-01-25
公開日2017-10-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Temperature-Sensitive Substrate and Product Binding Underlie Temperature-Compensated Phosphorylation in the Clock
Mol. Cell, 67, 2017
5X18
DownloadVisualize
BU of 5x18 by Molmil
Crystal structure of Casein kinase I homolog 1
分子名称: Casein kinase I homolog 1, GLYCEROL, MALONIC ACID
著者Kikuchi, M, Shinohara, Y, Ueda, H.R, Umehara, T.
登録日2017-01-25
公開日2017-10-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Temperature-Sensitive Substrate and Product Binding Underlie Temperature-Compensated Phosphorylation in the Clock
Mol. Cell, 67, 2017
6PXO
DownloadVisualize
BU of 6pxo by Molmil
Human Casein Kinase 1 delta (anion-free crystallization conditions)
分子名称: Casein kinase I isoform delta
著者Freeberg, A, Philpott, J.M, Tripathi, S.M, Partch, C.L.
登録日2019-07-26
公開日2020-02-12
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Casein kinase 1 dynamics underlie substrate selectivity and the PER2 circadian phosphoswitch.
Elife, 9, 2020
6BB8
DownloadVisualize
BU of 6bb8 by Molmil
Crystal Structure of Frequency-Interacting RNA helicase (FRH)
分子名称: FRQ-interacting RNA helicase
著者Morales, Y, Johnson, S.J, Olsen, K.J.
登録日2017-10-17
公開日2018-08-29
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.49 Å)
主引用文献Structure of frequency-interacting RNA helicase from Neurospora crassa reveals high flexibility in a domain critical for circadian rhythm and RNA surveillance.
PLoS ONE, 13, 2018
4IT4
DownloadVisualize
BU of 4it4 by Molmil
Crystal structure of residues 1-211 of CG17282
分子名称: ACETIC ACID, CG17282, FORMIC ACID, ...
著者Agyekum, B, Bouyain, S.
登録日2013-01-17
公開日2013-08-14
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Noncanonical FK506-Binding Protein BDBT Binds DBT to Enhance Its Circadian Function and Forms Foci at Night.
Neuron, 80, 2013

227111

件を2024-11-06に公開中

PDB statisticsPDBj update infoContact PDBjnumon