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8BR8
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Giardia ribosome in POST-T state (A1)
分子名称: 40S ribosomal protein S21, 40S ribosomal protein S25, 40S ribosomal protein S26, ...
著者Majumdar, S, Emmerich, A.G, Sanyal, S.
登録日2022-11-22
公開日2023-03-15
最終更新日2024-11-06
実験手法ELECTRON MICROSCOPY (3.35 Å)
主引用文献Insights into translocation mechanism and ribosome evolution from cryo-EM structures of translocation intermediates of Giardia intestinalis.
Nucleic Acids Res., 51, 2023
8BRM
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BU of 8brm by Molmil
Giardia ribosome in POST-T state, no E-site tRNA (A6)
分子名称: 5.8S rRNA, 5S rRNA, Large Subunit rRNA, ...
著者Majumdar, S, Emmerich, A.G, Sanyal, S.
登録日2022-11-23
公開日2023-03-15
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (3.33 Å)
主引用文献Insights into translocation mechanism and ribosome evolution from cryo-EM structures of translocation intermediates of Giardia intestinalis.
Nucleic Acids Res., 51, 2023
8BSI
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BU of 8bsi by Molmil
Giardia ribosome chimeric hybrid-like GDP+Pi bound state (B1)
分子名称: 40S ribosomal protein S21, 40S ribosomal protein S25, 40S ribosomal protein S26, ...
著者Majumdar, S, Emmerich, A.G, Sanyal, S.
登録日2022-11-25
公開日2023-03-15
最終更新日2024-11-13
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Insights into translocation mechanism and ribosome evolution from cryo-EM structures of translocation intermediates of Giardia intestinalis.
Nucleic Acids Res., 51, 2023
6VYZ
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BU of 6vyz by Molmil
Escherichia coli transcription-translation complex C6 (TTC-C6) containing mRNA with a 21 nt long spacer, NusA, and fMet-tRNAs at E-site and P-site
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S1, ...
著者Molodtsov, V, Wang, C, Su, M, Ebright, R.H.
登録日2020-02-27
公開日2020-09-02
最終更新日2024-11-13
実験手法ELECTRON MICROSCOPY (9.9 Å)
主引用文献Structural basis of transcription-translation coupling.
Science, 369, 2020
6VYU
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BU of 6vyu by Molmil
Escherichia coli transcription-translation complex C2 (TTC-C2) containing a 27 nt long mRNA spacer
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S1, ...
著者Molodtsov, V, Wang, C, Su, M, Ebright, R.H.
登録日2020-02-27
公開日2020-09-02
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (7 Å)
主引用文献Structural basis of transcription-translation coupling.
Science, 369, 2020
6VZ2
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BU of 6vz2 by Molmil
Escherichia coli transcription-translation complex D1 (TTC-D1) containing mRNA with a 27 nt long spacer, NusG, and fMet-tRNAs at E-site and P-site
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S1, ...
著者Molodtsov, V, Wang, C, Su, M, Ebright, R.H.
登録日2020-02-27
公開日2020-09-02
最終更新日2024-11-06
実験手法ELECTRON MICROSCOPY (10 Å)
主引用文献Structural basis of transcription-translation coupling.
Science, 369, 2020
6VYY
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BU of 6vyy by Molmil
Escherichia coli transcription-translation complex C5 (TTC-C5) containing mRNA with a 21 nt long spacer, NusG, and fMet-tRNAs at E-site and P-site
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S1, ...
著者Molodtsov, V, Wang, C, Su, M, Ebright, R.H.
登録日2020-02-27
公開日2020-09-02
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (9.9 Å)
主引用文献Structural basis of transcription-translation coupling.
Science, 369, 2020
6VYW
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BU of 6vyw by Molmil
Escherichia coli transcription-translation complex C3 (TTC-C3) containing mRNA with a 27 nt long spacer, NusG, and fMet-tRNAs at E-site and P-site
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S1, ...
著者Molodtsov, V, Wang, C, Su, M, Ebright, R.H.
登録日2020-02-27
公開日2020-09-02
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (7 Å)
主引用文献Structural basis of transcription-translation coupling.
Science, 369, 2020
6VYX
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BU of 6vyx by Molmil
Escherichia coli transcription-translation complex C4 (TTC-C4) containing mRNA with a 21 nt long spacer, transcription factor NusG, and fMet-tRNAs at P-site and E-site
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S1, ...
著者Molodtsov, V, Wang, C, Su, M, Ebright, R.H.
登録日2020-02-27
公開日2020-09-02
最終更新日2024-10-09
実験手法ELECTRON MICROSCOPY (9.9 Å)
主引用文献Structural basis of transcription-translation coupling.
Science, 369, 2020
6VZ7
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BU of 6vz7 by Molmil
Escherichia coli transcription-translation complex C1 (TTC-C1) containing a 27 nt long mRNA spacer, NusG, and fMet-tRNAs at P-site and E-site
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S1, ...
著者Molodtsov, V, Wang, C, Su, M, Ebright, R.H.
登録日2020-02-27
公開日2020-09-02
最終更新日2025-03-19
実験手法ELECTRON MICROSCOPY (7 Å)
主引用文献Structural basis of transcription-translation coupling.
Science, 369, 2020
9C10
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BU of 9c10 by Molmil
AMG 193, a clinical stage MTA-cooperative PRMT5 inhibitor, drives anti-tumor activity preclinically and in patients with MTAP-deleted cancers
分子名称: (4-amino-1,3-dihydrofuro[3,4-c][1,7]naphthyridin-8-yl){(3S)-3-[4-(trifluoromethyl)phenyl]morpholin-4-yl}methanone, 5'-DEOXY-5'-METHYLTHIOADENOSINE, DIMETHYL SULFOXIDE, ...
著者Ghimire-Rijal, S, Mukund, S.
登録日2024-05-28
公開日2024-10-02
最終更新日2025-01-22
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献AMG 193, a Clinical Stage MTA-Cooperative PRMT5 Inhibitor, Drives Antitumor Activity Preclinically and in Patients with MTAP-Deleted Cancers.
Cancer Discov, 15, 2025
8XP3
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BU of 8xp3 by Molmil
Cryo-EM structure of the human 40S ribosome with LARP1 and LRRC47
分子名称: 18S rRNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ...
著者Huang, Z, Ye, X, Li, Y, Cheng, J.
登録日2024-01-02
公開日2024-11-20
最終更新日2025-01-01
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献LARP1 binds ribosomes and TOP mRNAs in repressed complexes.
Embo J., 43, 2024
8XP2
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BU of 8xp2 by Molmil
Cryo-EM structure of the human 40S ribosome with LARP1
分子名称: 18S rRNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ...
著者Huang, Z, Ye, X, Li, Y, Cheng, J.
登録日2024-01-02
公開日2024-11-20
最終更新日2025-01-01
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献LARP1 binds ribosomes and TOP mRNAs in repressed complexes.
Embo J., 43, 2024
7WBL
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BU of 7wbl by Molmil
Cryo-EM structure of human ACE2 complexed with SARS-CoV-2 Omicron RBD
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, Spike protein S1, ...
著者Liu, S, Gao, F.G.
登録日2021-12-17
公開日2022-01-19
最終更新日2025-06-25
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Receptor binding and complex structures of human ACE2 to spike RBD from omicron and delta SARS-CoV-2.
Cell, 185, 2022
4PVQ
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BU of 4pvq by Molmil
Crystal structure of sulfate-bound human l-asparaginase protein
分子名称: IODIDE ION, Isoaspartyl peptidase/L-asparaginase, SODIUM ION, ...
著者Nomme, J, Lavie, A.
登録日2014-03-18
公開日2014-03-26
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.13 Å)
主引用文献Structures of apo and product-bound human L-asparaginase: insights into the mechanism of autoproteolysis and substrate hydrolysis.
Biochemistry, 51, 2012
8FRR
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BU of 8frr by Molmil
Wild-type myocilin olfactomedin domain
分子名称: CALCIUM ION, GLYCEROL, Myocilin, ...
著者Ma, M.T, Lieberman, R.L, Huard, D.J.E.
登録日2023-01-08
公開日2024-01-17
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.27 Å)
主引用文献Competition between inside-out unfolding and pathogenic aggregation in an amyloid-forming beta-propeller.
Nat Commun, 15, 2024
7WPV
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BU of 7wpv by Molmil
Fab14 - a SARS-CoV2 RBD neutralising antibody
分子名称: Fab14 heavy chain, Fab14 light chain
著者Lin, J.Q, El Sahili, A, Lescar, J.
登録日2022-01-24
公開日2022-03-30
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.46 Å)
主引用文献Engineering SARS-CoV-2 specific cocktail antibodies into a bispecific format improves neutralizing potency and breadth.
Nat Commun, 13, 2022
7WPH
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BU of 7wph by Molmil
SARS-CoV2 RBD bound to Fab06
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, FAB06 light chain, Fab06 heavy chain, ...
著者Lin, J.Q, El Sahili, A, Lescar, J.
登録日2022-01-23
公開日2022-03-30
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2.89 Å)
主引用文献Engineering SARS-CoV-2 specific cocktail antibodies into a bispecific format improves neutralizing potency and breadth.
Nat Commun, 13, 2022
9GIR
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BU of 9gir by Molmil
BFL1 covalently bound to inhibitor compound 39
分子名称: Bcl-2-related protein A1, ~{N}-[4-[(1~{R},3~{R})-3-[[(3~{R})-1,1-bis(oxidanylidene)thiolan-3-yl]carbamoylamino]cyclopentyl]oxy-3-chloranyl-phenyl]-~{N}-[(1~{S})-1-(4-chlorophenyl)ethyl]propanamide
著者Cottee, M.A.
登録日2024-08-19
公開日2024-12-18
最終更新日2025-01-08
実験手法X-RAY DIFFRACTION (1.075 Å)
主引用文献Structure-Based Discovery of a Series of Covalent, Orally Bioavailable, and Selective BFL1 Inhibitors.
J.Med.Chem., 67, 2024
9GIQ
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BU of 9giq by Molmil
BFL1 covalently bound to inhibitor compound 13
分子名称: (2S,3S)-butane-2,3-diol, Bcl-2-related protein A1, ~{N}-[4-[(1~{R},3~{R})-3-azanylcyclopentyl]oxyphenyl]-~{N}-[(1~{S})-1-(4-chlorophenyl)-3-methyl-3-oxidanyl-butyl]propanamide
著者Cottee, M.A.
登録日2024-08-19
公開日2024-12-18
最終更新日2025-01-08
実験手法X-RAY DIFFRACTION (1.421 Å)
主引用文献Structure-Based Discovery of a Series of Covalent, Orally Bioavailable, and Selective BFL1 Inhibitors.
J.Med.Chem., 67, 2024
9GIP
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BU of 9gip by Molmil
BFL1 covalently bound to inhibitor compound 7
分子名称: Bcl-2-related protein A1, ~{N}-[4-[(1~{R},3~{R})-3-azanylcyclopentyl]oxyphenyl]-~{N}-[(1~{S})-1-(4-chlorophenyl)ethyl]propanamide
著者Hargreaves, D, Cottee, M.A.
登録日2024-08-19
公開日2024-12-18
最終更新日2025-01-08
実験手法X-RAY DIFFRACTION (1.463 Å)
主引用文献Structure-Based Discovery of a Series of Covalent, Orally Bioavailable, and Selective BFL1 Inhibitors.
J.Med.Chem., 67, 2024
9GIT
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BU of 9git by Molmil
BFL1 covalently bound to inhibitor compound 43
分子名称: (3~{S})-3-[[4-[(1~{R},3~{R})-3-[[(3~{R})-1,1-bis(oxidanylidene)thiolan-3-yl]carbamoylamino]cyclopentyl]oxy-3-fluoranyl-phenyl]-propanoyl-amino]-3-(4-chlorophenyl)propanamide, Bcl-2-related protein A1
著者Cottee, M.A.
登録日2024-08-19
公開日2024-12-18
最終更新日2025-01-08
実験手法X-RAY DIFFRACTION (1.145 Å)
主引用文献Structure-Based Discovery of a Series of Covalent, Orally Bioavailable, and Selective BFL1 Inhibitors.
J.Med.Chem., 67, 2024
9GIS
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BU of 9gis by Molmil
BFL1 covalently bound to inhibitor compound 17
分子名称: Bcl-2-related protein A1, ~{N}-[(1~{S})-1-(4-chlorophenyl)ethyl]-~{N}-[4-[(1~{R},3~{R})-3-[[(3~{S})-pyrrolidin-3-yl]carbamoylamino]cyclopentyl]oxyphenyl]propanamide
著者Cottee, M.A.
登録日2024-08-19
公開日2024-12-18
最終更新日2025-01-08
実験手法X-RAY DIFFRACTION (1.387 Å)
主引用文献Structure-Based Discovery of a Series of Covalent, Orally Bioavailable, and Selective BFL1 Inhibitors.
J.Med.Chem., 67, 2024
5WFK
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BU of 5wfk by Molmil
70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3)
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Fislage, M, Frank, J.
登録日2017-07-12
公開日2018-05-02
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Cryo-EM shows stages of initial codon selection on the ribosome by aa-tRNA in ternary complex with GTP and the GTPase-deficient EF-TuH84A.
Nucleic Acids Res., 46, 2018
7O80
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BU of 7o80 by Molmil
Rabbit 80S ribosome in complex with eRF1 and ABCE1 stalled at the STOP codon in the mutated SARS-CoV-2 slippery site
分子名称: 18S rRNA, 28S rRNA, 40S ribosomal protein S11, ...
著者Bhatt, P.R, Scaiola, A, Leibundgut, M.A, Atkins, J.F, Ban, N.
登録日2021-04-14
公開日2021-06-02
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Structural basis of ribosomal frameshifting during translation of the SARS-CoV-2 RNA genome.
Science, 372, 2021

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件を2025-07-09に公開中

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