PDB: 198 件ウェブページステータス検索Chemie searchBIRD

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4MO3	Crystal Structure of Porcine C2 Domain of Blood Coagulation Factor VIII 分子名称: Coagulation factor VIII, GLYCEROL 著者 Spiegel, P.C, Brison, C. 登録日 2013-09-11 公開日 2013-11-06 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.702 Å) 主引用文献 Crystal Structure of Porcine C2 Domain of Blood Coagulation Factor VIII (FoldIt Target) To be Published
4KI5	Cystal structure of human factor VIII C2 domain in a ternary complex with murine inhbitory antibodies 3E6 and G99 分子名称: Coagulation factor VIII, MURINE MONOCLONAL 3E6 FAB HEAVY CHAIN, MURINE MONOCLONAL 3E6 FAB LIGHT CHAIN, ... 著者 Walter, J.D, Meeks, S.L, Healey, J.F, Lollar, P, Spiegel, P.C. 登録日 2013-05-01 公開日 2014-01-15 実験手法 X-RAY DIFFRACTION (2.47 Å) 主引用文献 Structure of the factor VIII C2 domain in a ternary complex with 2 inhibitor antibodies reveals classical and nonclassical epitopes. Blood, 122, 2013
4OUE	Crystal structure of an a-L-Fucosidase GH29 from Bacteroides thetaiotaomicron (BT2192) in complex with IPTG 分子名称: 1-methylethyl 1-thio-beta-D-galactopyranoside, GLYCEROL, Putative lipoprotein 著者 Lafite, P, Daniellou, R, Guillotin, L. 登録日 2014-02-16 公開日 2014-02-26 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 Unraveling the Substrate Recognition Mechanism and Specificity of the Unusual Glycosyl Hydrolase Family 29 BT2192 from Bacteroides thetaiotaomicron. Biochemistry, 53, 2014
4OZO	Crystal structure of an a-L-fucosidase GH29 from Bacteroides thetaiotaomicron (BT2192) in complex with oNPTG 分子名称: 2-nitrophenyl 1-thio-beta-D-galactopyranoside, GLYCEROL, Putative lipoprotein 著者 Lafite, P, Daniellou, R, Guillotin, L. 登録日 2014-02-17 公開日 2014-03-05 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Unraveling the substrate recognition mechanism and specificity of the unusual glycosyl hydrolase family 29 BT2192 from Bacteroides thetaiotaomicron. Biochemistry, 53, 2014
4LPL	Structure of CBM32-1 from a family 31 glycoside hydrolase from Clostridium perfringens 分子名称: CALCIUM ION, Glycosyl hydrolase, family 31/fibronectin type III domain protein, ... 著者 Grondin, J.M, Duan, D, Heather, F.S, Spencer, C.A, Allingham, J.S, Smith, S.P. 登録日 2013-07-16 公開日 2014-07-16 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.35 Å) 主引用文献 Diverse modes of galacto-specific carbohydrate recognition by a family 31 glycoside hydrolase from Clostridium perfringens. Plos One, 12, 2017
4LQR	Structure of CBM32-3 from a family 31 glycoside hydrolase from Clostridium perfringens 分子名称: CALCIUM ION, Glycosyl hydrolase, family 31/fibronectin type III domain protein 著者 Grondin, J.M, Furness, H.S, Duan, D, Spencer, C.A, Allingham, J.S, Smith, S.P. 登録日 2013-07-19 公開日 2014-07-23 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.58 Å) 主引用文献 Diverse modes of galacto-specific carbohydrate recognition by a family 31 glycoside hydrolase from Clostridium perfringens. Plos One, 12, 2017
4LKS	Structure of CBM32-3 from a family 31 glycoside hydrolase from Clostridium perfringens in complex with galactose 分子名称: CALCIUM ION, Glycosyl hydrolase, family 31/fibronectin type III domain protein, ... 著者 Grondin, J.M, Duan, D, Kirlin, A.C, Furness, H.S, Allingham, J.S, Smith, S.P. 登録日 2013-07-08 公開日 2014-12-24 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Diverse modes of galacto-specific carbohydrate recognition by a family 31 glycoside hydrolase from Clostridium perfringens. Plos One, 12, 2017
4PT6	The discobody: an engineered discoidin domain from factor VIII that binds v 3 integrin with antibody-like affinities 分子名称: Coagulation factor VIII 著者 Kym, G, Shi, K, Kamajaya, A, Hamdouche, S, Kostecki, J.S, Wannier, T, Li, B, Nikolovski, P, Mayo, S.L. 登録日 2014-03-10 公開日 2015-04-08 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 The discobody: an engineered discoidin domain from factor VIII that binds v 3 integrin with antibody-like affinities To be Published
4QDQ	Physical basis for Nrp2 ligand binding 分子名称: GLYCEROL, Neuropilin-2, SULFATE ION 著者 Parker, M.W, Vander Kooi, C.W. 登録日 2014-05-14 公開日 2015-04-15 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Structural Basis for VEGF-C Binding to Neuropilin-2 and Sequestration by a Soluble Splice Form. Structure, 23, 2015
4QDR	Physical basis for Nrp2 ligand binding 分子名称: Neuropilin-2 著者 Parker, M.W, Vander Kooi, C.W. 登録日 2014-05-14 公開日 2015-04-15 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structural Basis for VEGF-C Binding to Neuropilin-2 and Sequestration by a Soluble Splice Form. Structure, 23, 2015
4QDS	Physical basis for Nrp2 ligand binding 分子名称: ACETATE ION, GLYCEROL, Neuropilin-2 著者 Parker, M.W, Vander Kooi, C.W. 登録日 2014-05-14 公開日 2015-04-15 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structural Basis for VEGF-C Binding to Neuropilin-2 and Sequestration by a Soluble Splice Form. Structure, 23, 2015
4P5Y	Structure of CBM32-3 from a family 31 glycoside hydrolase from Clostridium perfringens in complex with N-acetylgalactosamine 分子名称: 2-acetamido-2-deoxy-beta-D-galactopyranose, CALCIUM ION, Glycosyl hydrolase, ... 著者 Grondin, J.M, Allingham, J.S, Boraston, A.B, Smith, S.P. 登録日 2014-03-04 公開日 2015-10-07 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Diverse modes of galacto-specific carbohydrate recognition by a family 31 glycoside hydrolase from Clostridium perfringens. PLoS ONE, 12, 2017
4RN5	B1 domain of human Neuropilin-1 with acetate ion in a ligand-binding site 分子名称: ACETATE ION, GLYCEROL, Neuropilin-1, ... 著者 Allerston, C.K, Yelland, T.S, Jarvis, A, Jenkins, K, Winfield, N, Cheng, L, Jia, H, Zachary, I, Selwood, D.L, Djordjevic, S. 登録日 2014-10-23 公開日 2015-10-28 実験手法 X-RAY DIFFRACTION (1.73 Å) 主引用文献 Conserved water molecules in a ligand-binding site of neuropilin-1 To be Published
4TXW	Crystal structure of CBM32-4 from the Clostridium perfringens NagH 分子名称: 1,2-ETHANEDIOL, CALCIUM ION, Hyaluronoglucosaminidase 著者 Grondin, J.M, Ficko-Blean, E, Boraston, A.B, Smith, S.P. 登録日 2014-07-07 公開日 2015-12-09 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Solution Structure and Dynamics of Full-length GH84A, a multimodular B-N-acetylglucosaminidase from Clostridium perfringens To Be Published
4XZU	Crystal Structure of the Human Factor VIII C2 Domain in Complex with Murine 3E6 Inhibitory Antibody 分子名称: 3E6 antibody Fab heavy chain, 3E6 antibody Fab light chain, Coagulation factor VIII, ... 著者 Spiegel, P.C, Wuerth, M.E. 登録日 2015-02-05 公開日 2015-12-09 最終更新日 2019-12-04 実験手法 X-RAY DIFFRACTION (2.61 Å) 主引用文献 Structure of the Human Factor VIII C2 Domain in Complex with the 3E6 Inhibitory Antibody. Sci Rep, 5, 2015
2RVA	Solution structure of chitosan-binding module 2 derived from chitosanase/glucanase from Paenibacillus sp. IK-5 分子名称: Glucanase 著者 Shinya, S, Nishimura, S, Fukamizo, T. 登録日 2015-05-13 公開日 2016-04-06 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Mechanism of chitosan recognition by CBM32 carbohydrate-binding modules from a Paenibacillus sp. IK-5 chitosanase/glucanase. Biochem.J., 473, 2016
2RV9	Solution structure of chitosan-binding module 1 derived from chitosanase/glucanase from Paenibacillus sp. IK-5 分子名称: Glucanase 著者 Shinya, S, Nishimura, S, Fukamizo, T. 登録日 2015-05-12 公開日 2016-04-06 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Mechanism of chitosan recognition by CBM32 carbohydrate-binding modules from a Paenibacillus sp. IK-5 chitosanase/glucanase. Biochem.J., 473, 2016
4ZZ5	X-ray crystal structure of chitosan-binding module 2 derived from chitosanase/glucanase from Paenibacillus sp. IK-5 分子名称: 1,2-ETHANEDIOL, Glucanase/chitosanase, SULFATE ION 著者 Shinya, S, Oi, H, Kitaoku, Y, Ohnuma, T, Numata, T, Fukamizo, T. 登録日 2015-05-22 公開日 2016-04-13 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.29 Å) 主引用文献 Mechanism of chitosan recognition by CBM32 carbohydrate-binding modules from a Paenibacillus sp. IK-5 chitosanase/glucanase Biochem.J., 473, 2016
4ZZ8	X-ray crystal structure of chitosan-binding module 2 in complex with chitotriose derived from chitosanase/glucanase from Paenibacillus sp. IK-5 分子名称: 1,2-ETHANEDIOL, 2-amino-2-deoxy-beta-D-glucopyranose-(1-4)-2-amino-2-deoxy-beta-D-glucopyranose-(1-4)-2-amino-2-deoxy-beta-D-glucopyranose, Glucanase/chitosanase, ... 著者 Shinya, S, Oi, H, Kitaoku, Y, Ohnuma, T, Numata, T, Fukamizo, T. 登録日 2015-05-22 公開日 2016-04-13 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Mechanism of chitosan recognition by CBM32 carbohydrate-binding modules from a Paenibacillus sp. IK-5 chitosanase/glucanase Biochem.J., 473, 2016
4ZXE	X-ray crystal structure of chitosan-binding module 1 derived from chitosanase/glucanase from Paenibacillus sp. IK-5. 分子名称: 1,2-ETHANEDIOL, Glucanase/Chitosanase, SULFATE ION 著者 Shinya, S, Oi, H, Kitaoku, Y, Ohnuma, T, Numata, T, Fukamizo, T. 登録日 2015-05-20 公開日 2016-04-13 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Mechanism of chitosan recognition by CBM32 carbohydrate-binding modules from a Paenibacillus sp. IK-5 chitosanase/glucanase Biochem.J., 473, 2016
4ZY9	X-ray crystal structure of selenomethionine-labelled V110M mutant of chitosan-binding module 1 derived from chitosanase/glucanase from Paenibacillus sp. IK-5 分子名称: Glucanase/chitosanase 著者 Shinya, S, Oi, H, Kitaoku, Y, Ohnuma, T, Numata, T, Fukamizo, T. 登録日 2015-05-21 公開日 2016-04-13 最終更新日 2020-02-19 実験手法 X-RAY DIFFRACTION (1.2 Å) 主引用文献 Mechanism of chitosan recognition by CBM32 carbohydrate-binding modules from a Paenibacillus sp. IK-5 chitosanase/glucanase Biochem.J., 473, 2016
3JD6	Double octamer structure of retinoschisin, a cell-cell adhesion protein of the retina 分子名称: Retinoschisin 著者 Tolun, G, Vijayasarathy, C, Huang, R, Zeng, Y, Li, Y, Steven, A.C, Sieving, P.A, Heymann, J.B. 登録日 2016-04-12 公開日 2016-05-11 最終更新日 2018-07-18 実験手法 ELECTRON MICROSCOPY (4.1 Å) 主引用文献 Paired octamer rings of retinoschisin suggest a junctional model for cell-cell adhesion in the retina. Proc.Natl.Acad.Sci.USA, 113, 2016
5C7G	Crystal Structure of the b1 Domain of Human Neuropilin-1 in complex with a bicine molecule 分子名称: BICINE, Neuropilin-1, SODIUM ION 著者 Didierjean, C, Jelsch, C. 登録日 2015-06-24 公開日 2016-07-06 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Design, synthesis and biological evaluation of new peptidomimetic compounds targeting NRP-1 receptor TO BE PUBLISHED To Be Published
5DN2	Human NRP2 b1 domain in complex with the peptide corresponding to the C-terminus of VEGF-A 分子名称: 1,4-DIETHYLENE DIOXIDE, GLYCEROL, Neuropilin-2, ... 著者 Tsai, Y.C.I, Frankel, P, Fotinou, C, Rana, R, Zachary, I, Djordjevic, S. 登録日 2015-09-09 公開日 2016-07-20 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Structural studies of neuropilin-2 reveal a zinc ion binding site remote from the vascular endothelial growth factor binding pocket. Febs J., 283, 2016
5DQ0	Structure of human neuropilin-2 b1 domain with novel and unique zinc binding site 分子名称: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, ... 著者 Tsai, Y.I, Rana, R.R, Zachary, I, Djordjevic, S. 登録日 2015-09-14 公開日 2016-09-28 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structure of human neuropilin-2 b1 domain with novel and unique zinc binding site To Be Published

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