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4PH3
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BU of 4ph3 by Molmil
N-terminal domain of the capsid protein from bovine leukaemia virus (with no beta-hairpin)
分子名称: BLV capsid, GLYCEROL, IODIDE ION
著者Trajtenberg, F, Obal, G, Pritsch, O, Buschiazzo, A.
登録日2014-05-03
公開日2015-06-10
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.44 Å)
主引用文献STRUCTURAL VIROLOGY. Conformational plasticity of a native retroviral capsid revealed by x-ray crystallography.
Science, 349, 2015
4P9G
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BU of 4p9g by Molmil
Structure of the 2,4'-dihydroxyacetophenone dioxygenase from Alcaligenes sp.
分子名称: 2,4'-dihydroxyacetophenone dioxygenase, CARBONATE ION, FE (III) ION, ...
著者Keegan, R, Lebedev, A, Erskine, P, Guo, J, Wood, S.P, Hopper, D.J, Cooper, J.B.
登録日2014-04-03
公開日2014-09-10
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure of the 2,4'-dihydroxyacetophenone dioxygenase from Alcaligenes sp. 4HAP
Acta Crystallogr.,Sect.D, 70, 2014
7N3E
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BU of 7n3e by Molmil
Crystal structure of an anti-SARS-CoV-2 human neutralizing antibody Fab fragment C032
分子名称: C032 Fab Heavy Chain, C032 Fab Light Chain
著者Flyak, A.I, Bjorkman, P.J, Barnes, C.O.
登録日2021-06-01
公開日2021-08-04
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.06 Å)
主引用文献Affinity maturation of SARS-CoV-2 neutralizing antibodies confers potency, breadth, and resilience to viral escape mutations.
Immunity, 54, 2021
3DD7
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BU of 3dd7 by Molmil
Structure of DocH66Y in complex with the C-terminal domain of Phd
分子名称: BROMIDE ION, Death on curing protein, Prevent host death protein
著者Garcia-Pino, A, Loris, R.
登録日2008-06-05
公開日2008-09-16
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Doc of Prophage P1 Is Inhibited by Its Antitoxin Partner Phd through Fold Complementation
J.Biol.Chem., 283, 2008
3D8H
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BU of 3d8h by Molmil
Crystal structure of phosphoglycerate mutase from Cryptosporidium parvum, cgd7_4270
分子名称: Glycolytic phosphoglycerate mutase
著者Wernimont, A.K, Lew, J, Wasney, G, Alam, Z, Kozieradzki, I, Cossar, D, Schapiro, M, Bochkarev, A, Arrowsmith, C.H, Bountra, C, Wilkstrom, M, Edwards, A.M, Hui, R, Artz, J.D, Hills, T, Structural Genomics Consortium (SGC)
登録日2008-05-23
公開日2008-07-15
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Characterization of a new phosphatase from Plasmodium.
Mol.Biochem.Parasitol., 179, 2011
3M1D
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BU of 3m1d by Molmil
Structure of BIR1 from cIAP1
分子名称: Baculoviral IAP repeat-containing protein 2, ZINC ION
著者Mace, P.D, Day, C.L.
登録日2010-03-04
公開日2010-05-26
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Asymmetric recruitment of cIAPs by TRAF2
J.Mol.Biol., 400, 2010
8CP6
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BU of 8cp6 by Molmil
Type six secretion system exported effector 5 (Tse5)
分子名称: Toxin protein Tse5
著者Gonzalez-Magana, A, Tascon, I, Ubarretxena-Belandia, I, Albesa-Jove, D.
登録日2023-03-01
公開日2023-12-06
実験手法ELECTRON MICROSCOPY (2.45 Å)
主引用文献Structural and functional insights into the delivery of a bacterial Rhs pore-forming toxin to the membrane.
Nat Commun, 14, 2023
7N3G
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BU of 7n3g by Molmil
Crystal structure of an anti-SARS-CoV-2 human neutralizing antibody Fab fragment C098
分子名称: C098 Fab Heavy Chain, C098 Fab Light Chain
著者Flyak, A.I, Bjorkman, P.J, Barnes, C.O.
登録日2021-06-01
公開日2021-08-04
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.42 Å)
主引用文献Affinity maturation of SARS-CoV-2 neutralizing antibodies confers potency, breadth, and resilience to viral escape mutations.
Immunity, 54, 2021
3DEJ
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BU of 3dej by Molmil
Crystal Structures of Caspase-3 with Bound Isoquinoline-1,3,4-trione Derivative Inhibitors
分子名称: (1S)-1-(3-chlorophenyl)-2-oxo-2-[(1,3,4-trioxo-1,2,3,4-tetrahydroisoquinolin-5-yl)amino]ethyl acetate, Caspase-3
著者Wu, J, Du, J, Li, J, Ding, J.
登録日2008-06-10
公開日2008-09-02
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Isoquinoline-1,3,4-trione Derivatives Inactivate Caspase-3 by Generation of Reactive Oxygen Species
J.Biol.Chem., 283, 2008
3DES
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BU of 3des by Molmil
Crystal structure of dipeptide epimerase from Thermotoga maritima complexed with L-Ala-L-Phe dipeptide
分子名称: ALANINE, MAGNESIUM ION, Muconate cycloisomerase, ...
著者Fedorov, A.A, Fedorov, E.V, Imker, H.J, Gerlt, J.A, Almo, S.C.
登録日2008-06-10
公開日2008-11-25
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Discovery of a dipeptide epimerase enzymatic function guided by homology modeling and virtual screening.
Structure, 16, 2008
4PJK
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BU of 4pjk by Molmil
Dicty myosin II R238E.E459R mutant (with ADP.Pi) in the Pi release state
分子名称: ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, MAGNESIUM ION, ...
著者Isabet, T, Benisty, H, Llinas, P, Sweeney, H.L, Houdusse, A.
登録日2014-05-12
公開日2015-04-29
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献How actin initiates the motor activity of Myosin.
Dev.Cell, 33, 2015
3DFJ
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BU of 3dfj by Molmil
Crystal structure of human Prostasin
分子名称: CHLORIDE ION, Prostasin
著者Su, H.P, Rickert, K.W, Darke, P.L, Munshi, S.K.
登録日2008-06-12
公開日2008-10-14
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Structure of human prostasin, a target for the regulation of hypertension.
J.Biol.Chem., 283, 2008
4PBO
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BU of 4pbo by Molmil
Crystal structure of zebrafish short-chain pentraxin protein without calcium ions
分子名称: C-reactive protein
著者Chen, R, Qi, J.X, George, F.G, Xia, C.
登録日2014-04-13
公開日2015-03-25
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.701 Å)
主引用文献Crystal structures for short-chain pentraxin from zebrafish demonstrate a cyclic trimer with new recognition and effector faces.
J.Struct.Biol., 189, 2015
4PBU
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BU of 4pbu by Molmil
Serial Time-resolved crystallography of Photosystem II using a femtosecond X-ray laser The S1 state
分子名称: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE, ...
著者Kupitz, C, Basu, S, Grotjohann, I, Fromme, R, Zatsepin, N, Rendek, K.N, Hunter, M, Shoeman, R.L, White, T.A, Wang, D, James, D, Yang, J.H, Cobb, D.E, Reeder, B, Sierra, R.G, Liu, H, Barty, A, Aquila, A, Deponte, D, Kirian, R.A, Bari, S, Bergkamp, J.J, Beyerlein, K, Bogan, M.J, Caleman, C, Chao, T.-C, Conrad, C.E, Davis, K.M, Fleckenstein, H, Galli, L, Hau-Riege, S.P, Kassemeyer, S, Laksmono, H, Liang, M, Lomb, L, Marchesini, S, Martin, A.V, Messerschmidt, M, Milathianaki, D, Nass, K, Ros, A, Roy-Chowdhury, S, Schmidt, K, Seibert, M, Steinbrener, J, Stellato, F, Yan, L, Yoon, C, Moore, T.A, Moore, A.L, Pushkar, Y, Williams, G.J, Boutet, S, Doak, R.B, Weierstall, U, Frank, M, Chapman, H.N, Spence, J.C.H, Fromme, P.
登録日2014-04-13
公開日2014-07-16
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (5 Å)
主引用文献Serial time-resolved crystallography of photosystem II using a femtosecond X-ray laser.
Nature, 513, 2014
3DFV
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BU of 3dfv by Molmil
Adjacent GATA DNA binding
分子名称: DNA (5'-D(*DAP*DAP*DGP*DCP*DAP*DGP*DAP*DTP*DAP*DAP*DGP*DTP*DCP*DTP*DTP*DAP*DTP*DCP*DAP*DG)-3'), DNA (5'-D(*DTP*DTP*DCP*DTP*DGP*DAP*DTP*DAP*DAP*DGP*DAP*DCP*DTP*DTP*DAP*DTP*DCP*DTP*DGP*DC)-3'), Trans-acting T-cell-specific transcription factor GATA-3, ...
著者Bates, D.L, Kim, G.K, Guo, L, Chen, L.
登録日2008-06-12
公開日2008-07-29
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Crystal structures of multiple GATA zinc fingers bound to DNA reveal new insights into DNA recognition and self-association by GATA.
J.Mol.Biol., 381, 2008
3M0K
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BU of 3m0k by Molmil
Structure of oxaloacetate acetylhydrolase in complex with the product oxalate
分子名称: CALCIUM ION, MANGANESE (II) ION, OXALATE ION, ...
著者Herzberg, O, Chen, C.
登録日2010-03-03
公開日2010-06-16
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structure of oxalacetate acetylhydrolase, a virulence factor of the chestnut blight fungus.
J.Biol.Chem., 285, 2010
8IKR
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BU of 8ikr by Molmil
Crystal structure of DpaA
分子名称: YkuD domain-containing protein
著者Wang, H.-J, Hsieh, K.-Y, Lee, S.-H, Chang, C.-I.
登録日2023-03-01
公開日2023-10-11
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural basis for the hydrolytic activity of the transpeptidase-like protein DpaA to detach Braun's lipoprotein from peptidoglycan.
Mbio, 14, 2023
4MPH
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BU of 4mph by Molmil
Crystal structure of BaLdcB / VanY-like L,D-carboxypeptidase Zinc(II)-bound
分子名称: 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL, CHLORIDE ION, D-alanyl-D-alanine carboxypeptidase family protein, ...
著者Stogios, P.J, Wawrzak, Z, Onopriyenko, O, Skarina, T, Shatsman, S, Peterson, S.N, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2013-09-12
公開日2013-09-25
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.0301 Å)
主引用文献Structure of the LdcB LD-Carboxypeptidase Reveals the Molecular Basis of Peptidoglycan Recognition.
Structure, 22, 2014
3DGD
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BU of 3dgd by Molmil
Crystal structure of the F87M/L110M mutant of human transthyretin at pH 4.6
分子名称: ACETATE ION, GLYCEROL, Transthyretin, ...
著者Palmieri, L.C, Freire, J.B.B, Foguel, D, Lima, L.M.T.R.
登録日2008-06-13
公開日2008-07-22
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.383 Å)
主引用文献Novel Zn2+-binding sites in human transthyretin: implications for amyloidogenesis and retinol-binding protein recognition.
J.Biol.Chem., 285, 2010
7N3F
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BU of 7n3f by Molmil
Crystal structure of an anti-SARS-CoV-2 human neutralizing antibody Fab fragment C080
分子名称: C080 Fab Heavy Chain, C080 Fab Light Chain
著者Flyak, A.I, Bjorkman, P.J, Barnes, C.O.
登録日2021-06-01
公開日2021-08-04
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Affinity maturation of SARS-CoV-2 neutralizing antibodies confers potency, breadth, and resilience to viral escape mutations.
Immunity, 54, 2021
4PM7
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BU of 4pm7 by Molmil
Crystal structure of CTX-M-14 S70G:S237A in complex with cefotaxime at 1.29 Angstroms resolution
分子名称: (6R,7R)-3-(acetyloxymethyl)-7-[[(2Z)-2-(2-amino-1,3-thiazol-4-yl)-2-methoxyimino-ethanoyl]amino]-8-oxo-5-thia-1-azabicy clo[4.2.0]oct-2-ene-2-carboxylic acid, Beta-lactamase CTX-M-14
著者Adamski, C.J, Cardenas, A.M, Sankaran, B, Palzkill, T.
登録日2014-05-20
公開日2014-12-31
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.29 Å)
主引用文献Molecular Basis for the Catalytic Specificity of the CTX-M Extended-Spectrum beta-Lactamases.
Biochemistry, 54, 2015
7N3H
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BU of 7n3h by Molmil
Crystal structure of an anti-SARS-CoV-2 human neutralizing antibody Fab fragment C099
分子名称: C099 Fab Heavy Chain, C099 Fab Light Chain
著者Flyak, A.I, Bjorkman, P.J, Barnes, C.O.
登録日2021-06-01
公開日2021-08-04
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.26 Å)
主引用文献Affinity maturation of SARS-CoV-2 neutralizing antibodies confers potency, breadth, and resilience to viral escape mutations.
Immunity, 54, 2021
4PN1
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BU of 4pn1 by Molmil
Structure of S. pombe Pct1 RNA triphosphatase in complex with the Spt5 CTD
分子名称: 1,2-ETHANEDIOL, FORMIC ACID, Synthetic peptide, ...
著者Lima, C.D, Doamekpor, S.K.
登録日2014-05-22
公開日2014-11-12
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.803 Å)
主引用文献Fission yeast RNA triphosphatase reads an Spt5 CTD code.
Rna, 21, 2015
7N3I
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BU of 7n3i by Molmil
Crystal structure of the SARS-CoV-2 receptor binding domain in complex with the human neutralizing antibody Fab fragment C098
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, C098 Fab heavy chain, C098 Fab light chain, ...
著者Flyak, A.I, Bjorkman, P.J, Barnes, C.O.
登録日2021-06-01
公開日2021-08-04
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Affinity maturation of SARS-CoV-2 neutralizing antibodies confers potency, breadth, and resilience to viral escape mutations.
Immunity, 54, 2021
3M52
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BU of 3m52 by Molmil
Crystal structure of the BTB domain from the Miz-1/ZBTB17 transcription regulator
分子名称: ACETATE ION, ZINC ION, Zinc finger and BTB domain-containing protein 17
著者Stogios, P.J, Cuesta-Seijo, J.A, Chen, L, Prive, G.G.
登録日2010-03-12
公開日2010-06-09
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.59 Å)
主引用文献Insights into Strand Exchange in BTB Domain Dimers from the Crystal Structures of FAZF and Miz1.
J.Mol.Biol., 400, 2010

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