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5FNA
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BU of 5fna by Molmil
Cryo-EM reconstruction of caspase-1 CARD
分子名称: Caspase-1
著者Li, Y, Lu, A, Schmidt, F.I, Yin, Q, Chen, S, Fu, T.M, Tong, A.B, Ploegh, H.L, Mao, Y, Wu, H.
登録日2015-11-11
公開日2016-03-30
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (4.8 Å)
主引用文献Molecular Basis of Caspase-1 Polymerization and its Inhibition by a Novel Capping Mechanism
Nat.Struct.Mol.Biol., 23, 2016
9EO0
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BU of 9eo0 by Molmil
Small-Molecule Inhibitors of Programmed Cell Death-1/Programmed Death-Ligand 1
分子名称: Programmed cell death 1 ligand 1, SULFATE ION, ~{N}-[3-[3-[[5-[(2-hydroxyethylamino)methyl]pyridin-2-yl]carbonylamino]-2-methyl-phenyl]-2-methyl-phenyl]-5-[[3-(methylsulfonylamino)propylamino]methyl]pyridine-2-carboxamide
著者Plewka, J, Hec, A, Sitar, T, Holak, T.
登録日2024-03-14
公開日2024-06-19
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Nonsymmetrically Substituted 1,1'-Biphenyl-Based Small Molecule Inhibitors of the PD-1/PD-L1 Interaction.
Acs Med.Chem.Lett., 15, 2024
1AGM
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BU of 1agm by Molmil
Refined structure for the complex of acarbose with glucoamylase from Aspergillus awamori var. x100 to 2.4 angstroms resolution
分子名称: 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, GLUCOAMYLASE-471, alpha-D-mannopyranose, ...
著者Aleshin, A.E, Firsov, L.M, Honzatko, R.B.
登録日1994-05-13
公開日1994-09-30
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Refined structure for the complex of acarbose with glucoamylase from Aspergillus awamori var. X100 to 2.4-A resolution.
J.Biol.Chem., 269, 1994
6HQB
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BU of 6hqb by Molmil
Monomeric cyanobacterial photosystem I
分子名称: (1~{S})-3,5,5-trimethyl-4-[(1~{E},3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E},17~{E})-3,7,12,16-tetramethyl-18-[(4~{S})-2,6,6-trimethyl-4-oxidanyl-cyclohexen-1-yl]octadeca-1,3,5,7,9,11,13,15,17-nonaenyl]cyclohex-3-en-1-ol, (3'R)-3'-hydroxy-beta,beta-caroten-4-one, 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, ...
著者Netzer-El, S.Y, Nelson, N, Caspy, I.
登録日2018-09-24
公開日2019-01-16
最終更新日2025-10-01
実験手法X-RAY DIFFRACTION (4 Å)
主引用文献Crystal Structure of Photosystem I Monomer From Synechocystis PCC 6803.
Front Plant Sci, 9, 2018
5OEW
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BU of 5oew by Molmil
Crystal structure of the GluA2 ligand-binding domain (S1S2J) in complex with glutamate and positive allosteric modulator BPAM538
分子名称: 4-cyclopropyl-7-(3-methoxyphenoxy)-2,3-dihydro-1$l^{6},2,4-benzothiadiazine 1,1-dioxide, ACETATE ION, GLUTAMIC ACID, ...
著者Larsen, A.P, Frydenvang, K.A, Kastrup, J.S.
登録日2017-07-10
公開日2018-01-03
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献7-Phenoxy-Substituted 3,4-Dihydro-2H-1,2,4-benzothiadiazine 1,1-Dioxides as Positive Allosteric Modulators of alpha-Amino-3-hydroxy-5-methyl-4-isoxazolepropionic Acid (AMPA) Receptors with Nanomolar Potency.
J. Med. Chem., 61, 2018
9E13
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BU of 9e13 by Molmil
Full-length human dynein-1 in phi-like comformation bound to a Lis1 dimer under Lis1 condition
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Cytoplasmic dynein 1 heavy chain 1, ...
著者Yang, J, Zhang, K.
登録日2024-10-21
公開日2025-08-06
最終更新日2025-08-13
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献Nde1 promotes Lis1 binding to full-length autoinhibited human dynein 1.
Nat.Chem.Biol., 2025
9E14
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BU of 9e14 by Molmil
Full-length human dynein-1 in phi-like comformation bound to a Lis1 dimer under Nde1-Lis1 condition
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Cytoplasmic dynein 1 heavy chain 1, ...
著者Yang, J, Zhang, K.
登録日2024-10-21
公開日2025-08-06
最終更新日2025-08-13
実験手法ELECTRON MICROSCOPY (5 Å)
主引用文献Nde1 promotes Lis1 binding to full-length autoinhibited human dynein 1.
Nat.Chem.Biol., 2025
6FP4
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BU of 6fp4 by Molmil
Thioredoxin glutathione reductase from Schistosoma mansoni in complex with 1,8-Naphthyridine-2-carboxylic acid
分子名称: (2R)-2-hydroxy-3-[4-(2-hydroxyethyl)piperazin-1-yl]propane-1-sulfonic acid, 1,8-naphthyridine-2-carboxylic acid, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Silvestri, I, Fata, F, MIele, A.E, Boumis, G, Williams, D.L, Angelucci, F.
登録日2018-02-09
公開日2018-06-06
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.501 Å)
主引用文献Fragment-Based Discovery of a Regulatory Site in Thioredoxin Glutathione Reductase Acting as "Doorstop" for NADPH Entry.
ACS Chem. Biol., 13, 2018
1M4P
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BU of 1m4p by Molmil
Structure of the Tsg101 UEV domain in complex with a HIV-1 PTAP "late domain" peptide, DYANA Ensemble
分子名称: Gag Polyprotein, Tumor Susceptibility gene 101 protein
著者Pornillos, O, Alam, S.L, Davis, D.R, Sundquist, W.I.
登録日2002-07-03
公開日2002-11-06
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structure of the Tsg101 UEV domain in complex with the PTAP motif of the HIV-1 p6 protein
Nat.Struct.Biol., 9, 2002
4Y8Y
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BU of 4y8y by Molmil
Factor XIa in complex with the inhibitor methyl (4-{4-chloro-2-[(1S)-1-({(2E)-3-[5-chloro-2-(1H-tetrazol-1-yl)phenyl]prop-2-enoyl}amino)-3-(morpholin-4-yl)-3-oxopropyl]-1H-imidazol-5-yl}phenyl)carbamate
分子名称: 1,2-ETHANEDIOL, Coagulation factor XIa, SULFATE ION, ...
著者Wei, A.
登録日2015-02-16
公開日2015-05-27
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Discovery of a Potent Parenterally Administered Factor XIa Inhibitor with Hydroxyquinolin-2(1H)-one as the P2' Moiety.
ACS Med Chem Lett, 6, 2015
1M4Q
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BU of 1m4q by Molmil
STRUCTURE OF THE TSG101 UEV DOMAIN IN COMPLEX WITH A HIV-1 PTAP "LATE DOMAIN" PEPTIDE, CNS ENSEMBLE
分子名称: Gag Polyprotein, Tumor Susceptibility gene 101 protein
著者Pornillos, O, Alam, S.L, Davis, D.R, Sundquist, W.I.
登録日2002-07-03
公開日2002-11-06
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structure of the Tsg101 UEV domain in complex with the PTAP motif of the HIV-1 p6 protein
Nat.Struct.Biol., 9, 2002
5L04
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BU of 5l04 by Molmil
STRUCTURE OF INTERFERON LAMBDA 1 RECEPTOR WITH HUMAN KINASE JAK1
分子名称: Interferon lambda receptor 1, Tyrosine-protein kinase JAK1
著者Lubkowski, J, Wlodawer, A, Zhang, D.
登録日2016-07-26
公開日2016-10-12
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal Structure of a Complex of the Intracellular Domain of Interferon lambda Receptor 1 (IFNLR1) and the FERM/SH2 Domains of Human JAK1.
J. Mol. Biol., 428, 2016
3MIA
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BU of 3mia by Molmil
Crystal structure of HIV-1 Tat complexed with ATP-bound human P-TEFb
分子名称: Cell division protein kinase 9, Cyclin-T1, MAGNESIUM ION, ...
著者Tahirov, T.H, Babayeva, N.D, Varzavand, K, Cooper, J.J, Sedore, S.C, Price, D.H.
登録日2010-04-09
公開日2010-06-09
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal structure of HIV-1 Tat complexed with human P-TEFb.
Nature, 465, 2010
9DD8
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BU of 9dd8 by Molmil
Cryo-EM structure of neutralizing human antibody D48 in complex with HSV-1 glycoprotein B trimer gB-Ecto.516P
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, D48 heavy chain, ...
著者Roark, R.S, Shapiro, L, Kwong, P.D.
登録日2024-08-27
公開日2025-09-10
実験手法ELECTRON MICROSCOPY (3.08 Å)
主引用文献Prefusion structure and neutralization of HSV-1 glycoprotein B
To Be Published
9DD6
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BU of 9dd6 by Molmil
Cryo-EM structure of neutralizing murine antibody WS.HSV-1.24 in complex with HSV-1 glycoprotein B trimer gB-Ecto.516P.531E
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Glycoprotein B, ...
著者Roark, R.S, Shapiro, L.S, Kwong, P.D.
登録日2024-08-27
公開日2025-09-10
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Prefusion structure and neutralization of HSV-1 glycoprotein B
To Be Published
9DD7
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BU of 9dd7 by Molmil
Cryo-EM structure of neutralizing human antibody D48 in complex with HSV-1 glycoprotein B trimer gB-Ecto.516P.531E.DS
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, D48 heavy chain, ...
著者Roark, R.S, Shapiro, L, Kwong, P.D.
登録日2024-08-27
公開日2025-09-10
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Prefusion structure and neutralization of HSV-1 glycoprotein B
To Be Published
9DD9
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BU of 9dd9 by Molmil
Cryo-EM structure of neutralizing human antibody D48 in complex with HSV-1 glycoprotein B trimer gB-Ecto.516P.531E
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, D48 heavy chain, ...
著者Roark, R.S, Shapiro, L.S, Kwong, P.D.
登録日2024-08-27
公開日2025-09-10
実験手法ELECTRON MICROSCOPY (3.77 Å)
主引用文献Herpes simplex virus 1 evades prefusion gB neutralization
To Be Published
9EBQ
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BU of 9ebq by Molmil
Peptide 2 (GLP-1 (ACPC18)) bound to GLP-1R/Gs complex (conformer 2)
分子名称: Glucagon-like peptide 1 receptor, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
著者Cary, B.P, Hager, M.V, Mariam, Z, Morris, R.K, Belousoff, M.J, Deganutti, G, Wootten, D, Sexton, P.M, Gellman, S.H.
登録日2024-11-12
公開日2025-03-26
最終更新日2025-04-16
実験手法ELECTRON MICROSCOPY (3.16 Å)
主引用文献Prolonged signaling of backbone-modified glucagon-like peptide- 1 analogues with diverse receptor trafficking.
Proc.Natl.Acad.Sci.USA, 122, 2025
9EBN
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BU of 9ebn by Molmil
Peptide 1 (GLP-1 (Aib16, ACPC18)) bound to GLP-1R/Gs complex
分子名称: Glucagon-like peptide 1 receptor, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
著者Cary, B.P, Hager, M.V, Mariam, Z, Morris, R.K, Belousoff, M.J, Deganutti, G, Wootten, D, Sexton, P.M, Gellman, S.H.
登録日2024-11-12
公開日2025-03-26
最終更新日2025-04-16
実験手法ELECTRON MICROSCOPY (3.44 Å)
主引用文献Prolonged signaling of backbone-modified glucagon-like peptide- 1 analogues with diverse receptor trafficking.
Proc.Natl.Acad.Sci.USA, 122, 2025
5F24
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BU of 5f24 by Molmil
Crystal structure of dual specific IMPase/NADP phosphatase bound with D-inositol-1-phosphate
分子名称: CALCIUM ION, CHLORIDE ION, D-MYO-INOSITOL-1-PHOSPHATE, ...
著者Bhattacharyya, S, Dutta, D, Ghosh, A.K, Das, A.K.
登録日2015-12-01
公開日2015-12-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural elucidation of the NADP(H) phosphatase activity of staphylococcal dual-specific IMPase/NADP(H) phosphatase
Acta Crystallogr D Struct Biol, 72, 2016
6A7S
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BU of 6a7s by Molmil
Ca2+-independent C-type lectin SPL-2 from Saxidomus purpuratus
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-galactopyranose, CALCIUM ION, ...
著者Unno, H, Hatakeyama, T.
登録日2018-07-04
公開日2019-03-20
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Novel Ca2+-independent carbohydrate recognition of the C-type lectins, SPL-1 and SPL-2, from the bivalve Saxidomus purpuratus.
Protein Sci., 28, 2019
5L93
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BU of 5l93 by Molmil
An atomic model of HIV-1 CA-SP1 reveals structures regulating assembly and maturation
分子名称: Capsid protein p24
著者Schur, F.K.M, Obr, M, Hagen, W.J.H, Wan, W, Arjen, J.J, Kirkpatrick, J.M, Sachse, C, Kraeusslich, H.-G, Briggs, J.A.G.
登録日2016-06-09
公開日2016-07-13
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献An atomic model of HIV-1 capsid-SP1 reveals structures regulating assembly and maturation.
Science, 353, 2016
4BI2
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BU of 4bi2 by Molmil
Scaffold Focused Virtual Screening: Prospective Application to the Discovery of TTK Inhibitor
分子名称: 1,2-ETHANEDIOL, 2-(2-(2-(2-(2-(2-ETHOXYETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHANOL, DUAL SPECIFICITY PROTEIN KINASE TTK, ...
著者Langdon, S.R, Westwood, I.M, van Montfort, R.L.M, Brown, N, Blagg, J.
登録日2013-04-09
公開日2013-05-22
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3.11 Å)
主引用文献Scaffold-Focused Virtual Screening: Prospective Application to the Discovery of Ttk Inhibitors.
J.Chem.Inf.Model, 53, 2013
4BHZ
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BU of 4bhz by Molmil
Scaffold Focused Virtual Screening: Prospective Application to the Discovery of TTK Inhibitor
分子名称: 1,2-ETHANEDIOL, 2-(2-(2-(2-(2-(2-ETHOXYETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHANOL, DUAL SPECIFICITY PROTEIN KINASE TTK, ...
著者Langdon, S.R, Westwood, I.M, van Montfort, R.L.M, Brown, N, Blagg, J.
登録日2013-04-09
公開日2013-05-22
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Scaffold-Focused Virtual Screening: Prospective Application to the Discovery of Ttk Inhibitors.
J.Chem.Inf.Model, 53, 2013
5AUW
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Crystal structure of DAPK1 in complex with quercetin.
分子名称: 3,5,7,3',4'-PENTAHYDROXYFLAVONE, Death-associated protein kinase 1
著者Yokoyama, T, Mizuguchi, M.
登録日2015-06-10
公開日2015-10-07
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural Insight into the Interactions between Death-Associated Protein Kinase 1 and Natural Flavonoids.
J.Med.Chem., 58, 2015

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