PDB: 46984 件ウェブページステータス検索Chemie searchBIRD

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7DUH	Crystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with mRNA and cognate transfer RNA anticodon stem-loop and sisomicin derivative N1''AC bound 分子名称: 30S Ribosomal RNA rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... 著者 DeMirci, H, Destan, E. 登録日 2021-01-09 公開日 2022-01-26 実験手法 X-RAY DIFFRACTION (3.75 Å) 主引用文献 Crystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with mRNA and cognate transfer RNA anticodon stem-loop and sisomicin derivative N1''AC bound to be published
7KEK	Structure of the free outer-arm dynein in pre-parallel state 分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Dynein alpha heavy chain, ... 著者 Rao, Q, Zhang, K. 登録日 2020-10-11 公開日 2021-09-29 最終更新日 2021-10-20 実験手法 ELECTRON MICROSCOPY (8 Å) 主引用文献 Structures of outer-arm dynein array on microtubule doublet reveal a motor coordination mechanism. Nat.Struct.Mol.Biol., 28, 2021
7K58	Structure of outer-arm dyneins bound to microtubule with microtubule binding state 1(MTBS-1) 分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Dynein heavy chain, ... 著者 Qinhui, R, Kai, Z. 登録日 2020-09-16 公開日 2021-09-29 最終更新日 2021-10-20 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Structures of outer-arm dynein array on microtubule doublet reveal a motor coordination mechanism. Nat.Struct.Mol.Biol., 28, 2021
7K5B	Structure of outer-arm dynein bound to microtubule doublet in microtubule binding state 2 (MTBS-2) 分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Dynein heavy chain, ... 著者 Rao, Q, Zhang, K. 登録日 2020-09-16 公開日 2021-09-29 最終更新日 2021-10-20 実験手法 ELECTRON MICROSCOPY (4.5 Å) 主引用文献 Structures of outer-arm dynein array on microtubule doublet reveal a motor coordination mechanism. Nat.Struct.Mol.Biol., 28, 2021
1D9Z	CRYSTAL STRUCTURE OF THE DNA REPAIR PROTEIN UVRB IN COMPLEX WITH ATP 分子名称: ADENOSINE-5'-TRIPHOSPHATE, EXCINUCLEASE UVRABC COMPONENT UVRB, MAGNESIUM ION, ... 著者 Theis, K, Chen, P.J, Skorvaga, M, Van Houten, B, Kisker, C. 登録日 1999-10-30 公開日 2000-05-03 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (3.15 Å) 主引用文献 Crystal structure of UvrB, a DNA helicase adapted for nucleotide excision repair. EMBO J., 18, 1999
7E8O	Crystal structure of proteinaceous RNase P(PRORP) from Planctomycetes bacterium GWF2_40_8 complexed with Escherichia coli histidine pre-tRNA 分子名称: CALCIUM ION, RNA-free ribonuclease P, histidine pre-tRNA 著者 Li, Y.Y, Gan, J.H. 登録日 2021-03-02 公開日 2022-03-02 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.804 Å) 主引用文献 Crystal structures and insights into precursor tRNA 5'-end processing by prokaryotic minimal protein-only RNase P. Nat Commun, 13, 2022
7KZM	Outer dynein arm bound to doublet microtubules from C. reinhardtii 分子名称: DC1, DC2, Dynein 11 kDa light chain, ... 著者 Walton, T, Wu, H, Brown, A.B. 登録日 2020-12-10 公開日 2021-01-20 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (7.5 Å) 主引用文献 Structure of a microtubule-bound axonemal dynein. Nat Commun, 12, 2021
7KZN	Outer dynein arm core subcomplex from C. reinhardtii 分子名称: DC1, DC2, Dynein 11 kDa light chain, ... 著者 Walton, T, Wu, H, Brown, A.B. 登録日 2020-12-10 公開日 2021-01-20 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (4 Å) 主引用文献 Structure of a microtubule-bound axonemal dynein. Nat Commun, 12, 2021
7KWG	Staphylococcus aureus 30S ribosomal subunit in presence of spermidine 分子名称: 16S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... 著者 Belinite, M, Khusainov, I, Marzi, S, Romby, P, Yusupov, M, Hashem, Y. 登録日 2020-11-30 公開日 2021-01-27 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (3.75 Å) 主引用文献 Stabilization of Ribosomal RNA of the Small Subunit by Spermidine in Staphylococcus aureus . Front Mol Biosci, 8, 2021
5U4I	Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to Ribosome 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Zeng, F, Chen, Y, Remis, J, Shekhar, M, Phillips, J.C, Tajkhorshid, E, Jin, H. 登録日 2016-12-04 公開日 2017-01-11 最終更新日 2019-12-18 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Structural basis of co-translational quality control by ArfA and RF2 bound to ribosome. Nature, 541, 2017
1G0U	A GATED CHANNEL INTO THE PROTEASOME CORE PARTICLE 分子名称: MAGNESIUM ION, PROTEASOME COMPONENT C1, PROTEASOME COMPONENT C11, ... 著者 Groll, M, Bajorek, M, Kohler, A, Moroder, L, Rubin, D.M, Huber, R, Glickman, M.H, Finley, D. 登録日 2000-10-09 公開日 2000-11-06 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 A gated channel into the proteasome core particle. Nat.Struct.Biol., 7, 2000
5XYI	Small subunit of Trichomonas vaginalis ribosome 分子名称: 18S, 40S ribosomal protein S13, putative, ... 著者 Li, Z, Guo, Q, Zheng, L, Ji, Y, Xie, Y, Lai, D, Lun, Z, Suo, X, Gao, N. 登録日 2017-07-08 公開日 2017-08-30 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (3.35 Å) 主引用文献 Cryo-EM structures of the 80S ribosomes from human parasites Trichomonas vaginalis and Toxoplasma gondii Cell Res., 27, 2017
5Y7G	Crystal structure of paFAN1 bound to 1nt 5'flap DNA with gap 分子名称: CALCIUM ION, DNA (5'-D(P*GP*AP*AP*TP*GP*TP*GP*TP*GP*TP*CP*TP*CP*AP*AP*TP*CP*CP*CP*AP*AP*CP*TP*T)-3'), DNA (5'-D(P*GP*TP*TP*GP*GP*GP*AP*TP*TP*G)-3'), ... 著者 Cho, Y, Jin, H. 登録日 2017-08-17 公開日 2018-03-14 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (3.4 Å) 主引用文献 Structural mechanism of DNA interstrand cross-link unhooking by the bacterial FAN1 nuclease. J. Biol. Chem., 293, 2018
6SB0	cryo-EM structure of mTORC1 bound to PRAS40-fused active RagA/C GTPases 分子名称: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, Proline-rich AKT1 substrate 1, ... 著者 Anandapadamanaban, M, Berndt, A, Masson, G.R, Perisic, O, Williams, R.L. 登録日 2019-07-18 公開日 2019-10-16 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (5.5 Å) 主引用文献 Architecture of human Rag GTPase heterodimers and their complex with mTORC1. Science, 366, 2019
5MGA	Structure of the Cpf1 endonuclease R-loop complex after DNA cleavage 分子名称: CRISPR-associated endonuclease Cpf1, DNA (26-MER), DNA (5'-D(P*CP*GP*TP*TP*AP*GP*AP*GP*AP*AP*GP*T)-3'), ... 著者 Montoya, G, Stella, S. 登録日 2016-11-21 公開日 2017-06-21 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Structure of the Cpf1 endonuclease R-loop complex after target DNA cleavage. Nature, 546, 2017
5MQ0	Structure of a spliceosome remodeled for exon ligation 分子名称: 3'-EXON OF UBC4 PRE-MRNA, BOUND BY PRP22 HELICASE, 5'-EXON OF UBC4 PRE-MRNA, ... 著者 Fica, S.M, Oubridge, C, Galej, W.P, Wilkinson, M.E, Newman, A.J, Bai, X.-C, Nagai, K. 登録日 2016-12-19 公開日 2017-01-18 最終更新日 2020-10-07 実験手法 ELECTRON MICROSCOPY (4.17 Å) 主引用文献 Structure of a spliceosome remodelled for exon ligation. Nature, 542, 2017
6TCL	Photosystem I tetramer 分子名称: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, BETA-CAROTENE, ... 著者 Chen, M, Perez-Boerema, A, Li, S, Amunts, A. 登録日 2019-11-06 公開日 2020-02-19 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Distinct structural modulation of photosystem I and lipid environment stabilizes its tetrameric assembly. Nat.Plants, 6, 2020
5MPS	Structure of a spliceosome remodeled for exon ligation 分子名称: GUANOSINE-5'-TRIPHOSPHATE, INOSITOL HEXAKISPHOSPHATE, MAGNESIUM ION, ... 著者 Fica, S.M, Oubridge, C, Galej, W.P, Wilkinson, M.E, Newman, A.J, Bai, X.-C, Nagai, K. 登録日 2016-12-18 公開日 2017-01-18 最終更新日 2020-10-07 実験手法 ELECTRON MICROSCOPY (3.85 Å) 主引用文献 Structure of a spliceosome remodelled for exon ligation. Nature, 542, 2017
5MY1	E. coli expressome 分子名称: 16S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... 著者 Kohler, R, Mooney, R.A, Mills, D.J, Kostrewa, D, Landick, R, Cramer, P. 登録日 2017-01-25 公開日 2017-04-26 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (7.6 Å) 主引用文献 Architecture of a transcribing-translating expressome. Science, 356, 2017
3OTO	Crystal Structure of the 30S ribosomal subunit from a KsgA mutant of Thermus thermophilus (HB8) 分子名称: 16S rRNA, 30S RIBOSOMAL PROTEIN S10, 30S RIBOSOMAL PROTEIN S11, ... 著者 Demirci, H, Murphy IV, F, Belardinelli, R, Kelley, A.C, Ramakrishnan, V, Gregory, S.T, Dahlberg, A.E, Jogl, G. 登録日 2010-09-13 公開日 2010-09-29 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (3.69 Å) 主引用文献 Modification of 16S ribosomal RNA by the KsgA methyltransferase restructures the 30S subunit to optimize ribosome function. Rna, 16, 2010
3ONR	Crystal structure of the calcium chelating immunodominant antigen, calcium dodecin (Rv0379),from Mycobacterium tuberculosis with a novel calcium-binding site 分子名称: CALCIUM ION, FORMIC ACID, PLATINUM (II) ION, ... 著者 Arulandu, A, Sacchettini, J.C. 登録日 2010-08-30 公開日 2011-03-16 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Crystal structure of calcium dodecin (Rv0379), from Mycobacterium tuberculosis with a unique calcium-binding site. Protein Sci., 20, 2011
5MYJ	Structure of 70S ribosome from Lactococcus lactis 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Franken, L.E, Oostergetel, G.T, Pijning, T, Puri, P, Boekema, E.J, Poolman, B, Guskov, A. 登録日 2017-01-26 公開日 2017-10-11 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (5.6 Å) 主引用文献 A general mechanism of ribosome dimerization revealed by single-particle cryo-electron microscopy. Nat Commun, 8, 2017
5NCO	Quaternary complex between SRP, SR, and SecYEG bound to the translating ribosome 分子名称: 23S rRNA, 4.5S SRP RNA (Ffs), 50S ribosomal protein L10, ... 著者 Jomaa, A, Hwang Fu, Y, Boerhinger, D, Leibundgut, M, Shan, S.O, Ban, N. 登録日 2017-03-06 公開日 2017-05-24 最終更新日 2018-03-28 実験手法 ELECTRON MICROSCOPY (4.8 Å) 主引用文献 Structure of the quaternary complex between SRP, SR, and translocon bound to the translating ribosome. Nat Commun, 8, 2017
6TML	Cryo-EM structure of Toxoplasma gondii mitochondrial ATP synthase hexamer, composite model 分子名称: ATP synthase subunit alpha, ATP synthase subunit beta, ATP synthase subunit delta, ... 著者 Muhleip, A, Kock Flygaard, R, Amunts, A. 登録日 2019-12-04 公開日 2020-12-16 最終更新日 2021-01-20 実験手法 ELECTRON MICROSCOPY (4.8 Å) 主引用文献 ATP synthase hexamer assemblies shape cristae of Toxoplasma mitochondria. Nat Commun, 12, 2021
6TBM	Structure of SAGA bound to TBP, including Spt8 and DUB 分子名称: Polyubiquitin-B, SAGA-associated factor 11, Spt20, ... 著者 Papai, G, Frechard, A, Kolesnikova, O, Crucifix, C, Schultz, P, Ben-Shem, A. 登録日 2019-11-01 公開日 2020-02-12 最終更新日 2021-06-30 実験手法 ELECTRON MICROSCOPY (20 Å) 主引用文献 Structure of SAGA and mechanism of TBP deposition on gene promoters. Nature, 577, 2020

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