PDB: 45953 件ウェブページステータス検索Chemie searchBIRD

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2AB5	bI3 LAGLIDADG Maturase 分子名称: SULFATE ION, mRNA maturase 著者 Longo, A, Leonard, C.W, Bassi, G.S, Berndt, D, Krahn, J.M, Hall, T.M, Weeks, K.M. 登録日 2005-07-14 公開日 2005-08-30 最終更新日 2017-10-11 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Evolution from DNA to RNA recognition by the bI3 LAGLIDADG maturase Nat.Struct.Mol.Biol., 12, 2005
3OXG	human lysine methyltransferase Smyd3 in complex with AdoHcy (Form III) 分子名称: S-ADENOSYL-L-HOMOCYSTEINE, SET and MYND domain-containing protein 3, ZINC ION 著者 Xu, S, Wu, J, Sun, B, Zhong, C, Ding, J. 登録日 2010-09-21 公開日 2011-02-23 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (3.41 Å) 主引用文献 Structural and biochemical studies of human lysine methyltransferase Smyd3 reveal the important functional roles of its post-SET and TPR domains and the regulation of its activity by DNA binding. Nucleic Acids Res., 39, 2011
3OXF	Human lysine methyltransferase Smyd3 in complex with AdoHcy (Form I) 分子名称: S-ADENOSYL-L-HOMOCYSTEINE, SET and MYND domain-containing protein 3, ZINC ION 著者 Xu, S, Wu, J, Sun, B, Zhong, C, Ding, J. 登録日 2010-09-21 公開日 2011-02-23 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.82 Å) 主引用文献 Structural and biochemical studies of human lysine methyltransferase Smyd3 reveal the important functional roles of its post-SET and TPR domains and the regulation of its activity by DNA binding. Nucleic Acids Res., 39, 2011
4K6B	Atomic structure of bacteriophage HS1 tail needle knob 分子名称: GLUTAMIC ACID, HS1 knob domain, PHOSPHATE ION 著者 Bhardwaj, A, Cingolani, G. 登録日 2013-04-15 公開日 2013-08-28 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.101 Å) 主引用文献 The tip of the tail needle affects the rate of DNA delivery by bacteriophage p22. Plos One, 8, 2013
9IOZ	Structure of the bacteriophage T5 tail tip complex 分子名称: Baseplate hub protein pb3, Baseplate tube protein p140, Distal tail protein pb9 著者 Peng, Y.N, Liu, H.R. 登録日 2024-07-10 公開日 2024-09-04 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 Structures of Mature and Urea-Treated Empty Bacteriophage T5: Insights into Siphophage Infection and DNA Ejection. Int J Mol Sci, 25, 2024
9INY	Structure of bacteriophage T5 tail tube 分子名称: Tail tube protein pb6 著者 Peng, Y.N, Liu, H.R. 登録日 2024-07-08 公開日 2024-09-04 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Structures of Mature and Urea-Treated Empty Bacteriophage T5: Insights into Siphophage Infection and DNA Ejection. Int J Mol Sci, 25, 2024
7AKO	Crystal structure of CHK1 kinase domain in complex with a CLASPIN phosphopeptide 分子名称: 1,2-ETHANEDIOL, Claspin, STAUROSPORINE, ... 著者 Day, M, Oliver, A.W, Pearl, L.H. 登録日 2020-10-01 公開日 2021-04-14 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structural basis for recruitment of the CHK1 DNA damage kinase by the CLASPIN scaffold protein. Structure, 29, 2021
7AKM	Crystal structure of CHK1 kinase domain in complex with ATPyS 分子名称: 1,2-ETHANEDIOL, CITRIC ACID, MAGNESIUM ION, ... 著者 Day, M, Oliver, A.W, Pearl, L.H. 登録日 2020-10-01 公開日 2021-04-14 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.93 Å) 主引用文献 Structural basis for recruitment of the CHK1 DNA damage kinase by the CLASPIN scaffold protein. Structure, 29, 2021
2LVS	NMR solution structure of a CRISPR repeat binding protein 分子名称: Putative uncharacterized protein 著者 Kenchappa, C.S, Heidarsson, P.O, Garrett, R.A, Poulsen, F.M. 登録日 2012-07-11 公開日 2013-01-23 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Solution properties of the archaeal CRISPR DNA repeat-binding homeodomain protein Cbp2. Nucleic Acids Res., 41, 2013
9ILV	Structure of the bacteriophage T5 connector complex 分子名称: Tail tube terminator protein p142 著者 Peng, Y.N, Liu, H.R. 登録日 2024-07-01 公開日 2024-09-04 実験手法 ELECTRON MICROSCOPY (4.8 Å) 主引用文献 Structures of Mature and Urea-Treated Empty Bacteriophage T5: Insights into Siphophage Infection and DNA Ejection. Int J Mol Sci, 25, 2024
2BRF	Crystal Structure of the FHA Domain of Human Polynucleotide Kinase 3' Phosphatase 分子名称: BIFUNCTIONAL POLYNUCLEOTIDE PHOSPHATASE/KINASE, SULFATE ION 著者 Oliver, A.W, Ali, A.A.E, Pearl, L.H. 登録日 2005-05-04 公開日 2005-05-09 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Specific Recognition of a Multiply Phosphorylated Motif in the DNA Repair Scaffold Xrcc1 by the Fha Domain of Human Pnk. Nucleic Acids Res., 37, 2009
7LWR	Structural and Biochemical Insight into Assembly of Molecular Motors Involved in Viral DNA Packaging 分子名称: Terminase, small subunit 著者 Ortega, M.E. 登録日 2021-03-01 公開日 2022-03-09 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 Structural and Biochemical Insight into Assembly of Molecular Motors Involved in Viral DNA Packaging To Be Published
7LXS	Structural and Biochemical Insight into Assembly of Molecular Motors Involved in Viral DNA Packaging 分子名称: Terminase, small subunit 著者 Ortega, M.E. 登録日 2021-03-04 公開日 2022-03-09 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.21 Å) 主引用文献 Structural and Biochemical Insight into Assembly of Molecular Motors Involved in Viral DNA Packaging To Be Published
7JTA	Crystal structure of a putative nuclease with anti-Cas9 activity from an uncultured Clostridia bacterium 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, NITRATE ION, NTF2-like nuclease/anti-CRISPR 著者 Werther, R, Forsberg, K.J, Stoddard, B.L. 登録日 2020-08-17 公開日 2021-09-22 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.801 Å) 主引用文献 The novel anti-CRISPR AcrIIA22 relieves DNA torsion in target plasmids and impairs SpyCas9 activity. Plos Biol., 19, 2021
2HK4	Dimeric solution structure of the cyclic octamer d(CCGTCCGT) 分子名称: 5'-D(P*CP*CP*GP*TP*CP*CP*GP*T)-3' 著者 Escaja, N, Gomez-Pinto, I, Pedroso, E, Gonzalez, C. 登録日 2006-07-03 公開日 2007-03-20 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Four-stranded DNA structures can be stabilized by two different types of minor groove G:C:G:C tetrads. J.Am.Chem.Soc., 129, 2007
6GHF	Crystal structure of a GST variant 分子名称: PvGmGSTUG 著者 Papageorgiou, A.C, Chronopoulou, E.G, Labrou, N.E. 登録日 2018-05-07 公開日 2018-12-26 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (3.52 Å) 主引用文献 Expanding the Plant GSTome Through Directed Evolution: DNA Shuffling for the Generation of New Synthetic Enzymes With Engineered Catalytic and Binding Properties. Front Plant Sci, 9, 2018
2B2B	Structural distortions in psoralen cross-linked DNA 分子名称: 4'-HYDROXYMETHYL-4,5',8-TRIMETHYLPSORALEN, 5'-D(*CP*CP*GP*CP*TP*AP*GP*CP*GP*G)-3', CALCIUM ION, ... 著者 Hays, F.A, Yonggang, H, Eichman, B.F, Kong, W, Hearst, J, Ho, P.S. 登録日 2005-09-19 公開日 2006-10-03 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Structural distortions in psoralen cross-linked DNA To be Published
3FT6	Crystal Structure of Proflavine in Complex with a DNA hexamer duplex 分子名称: 5'-D(*CP*GP*AP*TP*CP*G)-3', COBALT HEXAMMINE(III), PROFLAVIN 著者 Maehigashi, T, Persil, O, Hud, N.V, Williams, L.D. 登録日 2009-01-12 公開日 2010-02-02 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.12 Å) 主引用文献 Crystal Structure of Proflavine in Complex with a DNA hexamer duplex To be Published
5ZWZ	Crystal structure of Arabidopsis thaliana AGDP1 AGD34 分子名称: Agenet domain-containing protein 著者 Du, X, Du, J. 登録日 2018-05-17 公開日 2018-11-14 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Arabidopsis AGDP1 links H3K9me2 to DNA methylation in heterochromatin Nat Commun, 9, 2018
5ZWX	Crystal structure of Raphanus sativus AGDP1 AGD12 in complex with an H3K9me2 peptide 分子名称: DUF724 domain-containing protein 6-like, H3(1-15)K9me2 peptide 著者 Du, X, Du, J. 登録日 2018-05-17 公開日 2018-11-14 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Arabidopsis AGDP1 links H3K9me2 to DNA methylation in heterochromatin Nat Commun, 9, 2018
3CE5	A bimolecular parallel-stranded human telomeric quadruplex in complex with a 3,6,9-trisubstituted acridine molecule BRACO19 分子名称: 9-[4-(n,n-dimethylamino)phenylamino]-3,6-bis(3-pyrrolidinopropionamido) acridine, DNA (5'-D(*DTP*DAP*DGP*DGP*DGP*DTP*DTP*DAP*DGP*DGP*DGP*DT)-3'), POTASSIUM ION 著者 Campbell, N.H, Parkinson, G.N, Reszka, A.P, Neidle, S. 登録日 2008-02-28 公開日 2008-05-13 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structural basis of DNA quadruplex recognition by an acridine drug. J.Am.Chem.Soc., 130, 2008
3GJH	Crystal structure of a DNA duplex containing 7,8-dihydropyridol[2,3-d]pyrimidin-2-one 分子名称: 5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*(B7C)P*GP*CP*G)-3', 6-AMIDINE-2-(4-AMIDINO-PHENYL)INDOLE 著者 Takenaka, A, Juan, E.C.M, Shimizu, S, Haraguchi, T, Xiao, M, Kurose, T. 登録日 2009-03-09 公開日 2010-03-31 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Insights into the stabilizing contributions of bicyclic cytosine analogues: crystal structures of DNA duplexes containing 7,8-dihydropyridol[2,3-d]pyrimidin-2-one To be Published
3L6T	Crystal Structure of an N-terminal Mutant of the Plasmid pCU1 TraI Relaxase Domain 分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, CITRIC ACID, ... 著者 Redinbo, M.R, Nash, R.P. 登録日 2009-12-24 公開日 2010-05-19 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.93 Å) 主引用文献 The mechanism and control of DNA transfer by the conjugative relaxase of resistance plasmid pCU1. Nucleic Acids Res., 38, 2010
3LX6	Crystal structure of putative dna cytosine methylase from shigella flexneri 2a str. 2457T 分子名称: Cytosine-specific methyltransferase 著者 Ramagopal, U.A, Toro, R, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC) 登録日 2010-02-24 公開日 2010-03-23 最終更新日 2021-02-10 実験手法 X-RAY DIFFRACTION (2.29 Å) 主引用文献 Crystal structure of putative dna cytosine methylase from shigella flexneri 2a str. 2457T To be Published
3ME5	Crystal structure of putative dna cytosine methylase from shigella flexneri 2a str. 2457T 分子名称: Cytosine-specific methyltransferase 著者 Ramagopal, U.A, Malashkevich, V.N, Toro, R, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC) 登録日 2010-03-31 公開日 2010-04-21 最終更新日 2021-02-10 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Crystal structure of putative dna cytosine methylase from shigella flexneri 2a str. 2457T To be Published

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