PDB: 226262 件ウェブページステータス検索Chemie searchBIRD

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2RS4	NMR structure of stereo-array isotope labelled (SAIL) peptidyl-prolyl cis-trans isomerase from E. coli (EPPIb) 分子名称: Peptidyl-prolyl cis-trans isomerase B 著者 Takeda, M, Jee, J, Ono, A.M, Okuma, K, Terauchi, T, Kainosho, M. 登録日 2011-07-16 公開日 2011-10-12 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Hydrogen exchange study on the hydroxyl groups of serine and threonine residues in proteins and structure refinement using NOE restraints with polar side-chain groups J.Am.Chem.Soc., 133, 2011
4W8N	The crystal structure of hemagglutinin from a swine influenza virus (A/swine/Missouri/2124514/2006) 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin 著者 Yang, H, Carney, P.J, Tumpey, T.M, Stevens, J. 登録日 2014-08-25 公開日 2015-02-11 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Assessment of transmission, pathogenesis and adaptation of H2 subtype influenza viruses in ferrets. Virology, 477C, 2015
2RSV	Solution structure of human full-length vaccinia related kinase 1 (VRK1) 分子名称: Serine/threonine-protein kinase VRK1 著者 Koshiba, S, Tochio, N, Yokoyama, J, Kigawa, T. 登録日 2012-07-12 公開日 2013-12-04 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 A strategy for structure determination of large molecular weight protein using isotope labeling methodology with cell-free protein systhesis: application to 45 kDa human vaccinia related kianse 1 (VRK1) To be Published
8H41	Crystal structure of a decarboxylase from Trichosporon moniliiforme in complex with o-nitrophenol 分子名称: MAGNESIUM ION, O-NITROPHENOL, Salicylate decarboxylase 著者 Gao, J, Zhao, Y.P, Li, Q, Liu, W.D, Sheng, X. 登録日 2022-10-09 公開日 2023-08-16 実験手法 X-RAY DIFFRACTION (1.78 Å) 主引用文献 A Combined Computational-Experimental Study on the Substrate Binding and Reaction Mechanism of Salicylic Acid Decarboxylase Catalysts, 12, 2022
4W9F	pVHL:EloB:EloC in complex with (2S,4R)-1-(3,3-dimethylbutanoyl)-4-hydroxy-N-(4-(4-methylthiazol-5-yl)benzyl)pyrrolidine-2-carboxamide (ligand 5) 分子名称: (4R)-1-(3,3-dimethylbutanoyl)-4-hydroxy-N-[4-(4-methyl-1,3-thiazol-5-yl)benzyl]-L-prolinamide, Transcription elongation factor B polypeptide 1, Transcription elongation factor B polypeptide 2, ... 著者 van Molle, I, Hewitt, S, Galdeano, C, Gadd, M.S, Ciulli, A. 登録日 2014-08-27 公開日 2014-09-10 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structure-Guided Design and Optimization of Small Molecules Targeting the Protein-Protein Interaction between the von Hippel-Lindau (VHL) E3 Ubiquitin Ligase and the Hypoxia Inducible Factor (HIF) Alpha Subunit with in Vitro Nanomolar Affinities. J.Med.Chem., 57, 2014
2RUQ	solution structure of human Pin1 PPIase mutant C113A 分子名称: Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 著者 Jing, W, Tochio, N, Tate, S. 登録日 2015-01-20 公開日 2016-01-06 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Allosteric Breakage of the Hydrogen Bond within the Dual-Histidine Motif in the Active Site of Human Pin1 PPIase Biochemistry, 54, 2015
8HGC	Crystal structure of the CYP199A4 mutant F182T in complex with 4-methoxybenzoic acid 分子名称: 4-METHOXYBENZOIC ACID, ACETATE ION, Cytochrome P450, ... 著者 Jiang, Y, Cong, Z. 登録日 2022-11-14 公開日 2023-08-16 実験手法 X-RAY DIFFRACTION (1.72 Å) 主引用文献 Enabling Peroxygenase Activity in Cytochrome P450 Monooxygenases by Engineering Hydrogen Peroxide Tunnels. J.Am.Chem.Soc., 145, 2023
2RU9	Structure of the YAM domain of E. coli Transporter YajR 分子名称: Predicted transporter 著者 Liu, X, Feng, W. 登録日 2014-02-27 公開日 2014-07-02 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Atomic resolution structure of the E. coli YajR transporter YAM domain. Biochem.Biophys.Res.Commun., 450, 2014
4W9X	Crystal Structure of BMP-2-inducible kinase in complex with baricitinib 分子名称: 1,2-ETHANEDIOL, BMP-2-inducible protein kinase, Baricitinib 著者 Sorrell, F.J, Elkins, J.M, Krojer, T, Williams, E, Savitsky, P, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC) 登録日 2014-08-28 公開日 2014-09-10 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.14 Å) 主引用文献 Family-wide Structural Analysis of Human Numb-Associated Protein Kinases. Structure, 24, 2016
8HF1	DmDcr-2/R2D2/LoqsPD with 19bp-dsRNA in Trimer state 分子名称: Dicer-2, isoform A, LD06392p, ... 著者 Su, S, Wang, J, Ma, J. 登録日 2022-11-09 公開日 2023-09-06 実験手法 ELECTRON MICROSCOPY (3.7 Å) 主引用文献 Structural mechanism of R2D2 and Loqs-PD synergistic modulation on DmDcr-2 oligomers. Nat Commun, 14, 2023
2RRM	Interplay between phosphatidyl-inositol-phosphates and claudins upon binding to the 1st PDZ domain of zonula occludens 1 分子名称: Tight junction protein ZO-1 著者 Hiroaki, H, Satomura, K, Goda, N, Umetsu, Y, Taniguchi, R, Ikegami, T, Furuse, M. 登録日 2011-01-06 公開日 2011-05-25 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 1H, 13C, and 15N resonance assignment of the first PDZ domain of mouse ZO-1 Biomol.Nmr Assign., 5, 2011
8HKU	Cryo-EM Structures and Translocation Mechanism of Crenarchaeota Ribosome 分子名称: 23s rRNA (2996-MER), 50S ribosomal protein L1, 50S ribosomal protein L10e, ... 著者 Wang, Y.H, Zhou, J. 登録日 2022-11-28 公開日 2023-08-16 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (2.72 Å) 主引用文献 Cryo-electron microscopy structure and translocation mechanism of the crenarchaeal ribosome. Nucleic Acids Res., 51, 2023
2RSD	Solution structure of the plant homeodomain (PHD) of the E3 SUMO ligase Siz1 from rice 分子名称: E3 SUMO-protein ligase SIZ1, ZINC ION 著者 Shindo, H, Tsuchiya, W, Suzuki, R, Yamazaki, T. 登録日 2012-01-12 公開日 2012-08-15 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 PHD finger of the SUMO ligase Siz/PIAS family in rice reveals specific binding for methylated histone H3 at lysine 4 and arginine 2 Febs Lett., 586, 2012
8H1E	Aquifex aeolicus MutL endonuclease domain complexed with manganese ions 分子名称: DI(HYDROXYETHYL)ETHER, DNA mismatch repair protein MutL, MANGANESE (II) ION 著者 Fukui, K, Yano, T. 登録日 2022-10-03 公開日 2023-08-16 実験手法 X-RAY DIFFRACTION (1.22 Å) 主引用文献 Catalytic mechanism of the zinc-dependent MutL endonuclease reaction. Life Sci Alliance, 6, 2023
4UQR	Structure of Bacillus subtilis Nitric Oxide Synthase in complex with N-omega-Nitro-L-Arginine 分子名称: 5,6,7,8-TETRAHYDROBIOPTERIN, DI(HYDROXYETHYL)ETHER, GLYCEROL, ... 著者 Holden, J.K, Poulos, T.L. 登録日 2014-06-24 公開日 2014-09-17 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.72 Å) 主引用文献 Identification of Redox Partners and Development of a Novel Chimeric Bacterial Nitric Oxide Synthase for Structure Activity Analyses. J.Biol.Chem., 289, 2014
8H1Y	Serine Palmitoyltransferase from Sphingobacterium multivorum complexed with L-homoserine 分子名称: (2~{S})-2-[[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylamino]-4-oxidanyl-butanoic acid, 1,2-ETHANEDIOL, Serine palmitoyltransferase 著者 Murakami, T, Takahashi, A, Katayama, A, Miyahara, I, Kamiya, N, Ikushiro, H, Yano, T. 登録日 2022-10-04 公開日 2023-08-16 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Structural insights into the substrate recognition of serine palmitoyltransferase from Sphingobacterium multivorum. J.Biol.Chem., 299, 2023
2RU4	Designed Armadillo Repeat Protein Self-ASsembled Complex (YIIM2-MAII) 分子名称: Armadillo Repeat Protein, C-terminal fragment, MAII, ... 著者 Zerbe, O, Christen, M.T, Plueckthun, A, Watson, R.P. 登録日 2013-11-22 公開日 2014-07-23 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Spontaneous self-assembly of engineered armadillo repeat protein fragments into a folded structure Structure, 22, 2014
4V2V	JMJD2A COMPLEXED WITH NI(II), NOG AND HISTONE H3K27me3 PEPTIDE (25-29) ARK(me3)SA 分子名称: CHLORIDE ION, HISTONE H3.1T, LYSINE-SPECIFIC DEMETHYLASE 4A, ... 著者 Chowdhury, R, Madden, S.K, Schofield, C.J. 登録日 2014-10-15 公開日 2014-11-05 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Studies on the Catalytic Domains of Multiple Jmjc Oxygenases Using Peptide Substrates. Epigenetics, 9, 2014
2RV8	Solution Structure of the PhoP DNA-Binding Domain from Mycobacterium tuberculosis 分子名称: DNA-binding response regulator 著者 Macdonald, R, Sarkar, D, Amer, B.R, Clubb, R.T. 登録日 2015-04-17 公開日 2015-08-12 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Solution structure of the PhoP DNA-binding domain from Mycobacterium tuberculosis. J.Biomol.Nmr, 63, 2015
4WAA	Crystal structure of Nix LIR-fused human LC3B_2-119 分子名称: Microtubule-associated proteins 1A/1B light chain 3B 著者 Suzuki, H, Ravichandran, A.C, Dobson, R.C.J, Novak, I, Wakatsuki, S. 登録日 2014-08-29 公開日 2015-09-09 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 Phosphorylation of the mitochondrial autophagy receptor Nix enhances its interaction with LC3 proteins. Sci Rep, 7, 2017
8HPL	LpqY-SugABC in state 1 分子名称: ABC sugar transporter, permease component, ABC transporter, ... 著者 Liang, J, Yang, X, Zhang, B, Rao, Z, Liu, F. 登録日 2022-12-12 公開日 2023-09-06 最終更新日 2023-10-18 実験手法 ELECTRON MICROSCOPY (4.29 Å) 主引用文献 Structural insights into trehalose capture and translocation by mycobacterial LpqY-SugABC. Structure, 31, 2023
8HPR	LpqY-SugABC in state 4 分子名称: ABC sugar transporter, permease component, ABC transporter, ... 著者 Liang, J, Yang, X, Zhang, B, Rao, Z, Liu, F. 登録日 2022-12-12 公開日 2023-09-06 最終更新日 2023-10-18 実験手法 ELECTRON MICROSCOPY (3.75 Å) 主引用文献 Structural insights into trehalose capture and translocation by mycobacterial LpqY-SugABC. Structure, 31, 2023
2RNG	Solution structure of big defensin 分子名称: Big defensin 著者 Kouno, T, Fujitani, N, Osaki, T, Kawabata, S, Nishimura, S, Mizuguchi, M, Aizawa, T, Demura, M, Nitta, K, Kawano, K. 登録日 2007-12-27 公開日 2008-10-14 最終更新日 2023-06-14 実験手法 SOLUTION NMR 主引用文献 A novel beta-defensin structure: a potential strategy of big defensin for overcoming resistance by Gram-positive bacteria Biochemistry, 47, 2008
4WAG	Phosphatidylinositol 4-kinase III beta crystallized with MI103 inhibitor 分子名称: 6-chloro-3-(3,4-dimethoxyphenyl)-2-methylimidazo[1,2-b]pyridazin-8-amine, Phosphatidylinositol 4-kinase beta,Phosphatidylinositol 4-kinase beta 著者 Chalupska, D, Boura, E. 登録日 2014-08-29 公開日 2015-05-20 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (3.407 Å) 主引用文献 Highly Selective Phosphatidylinositol 4-Kinase III beta Inhibitors and Structural Insight into Their Mode of Action. J.Med.Chem., 58, 2015
8HGT	Crystal structure of the CYP153A mutant V456A from Marinobacter aquaeolei 分子名称: Cytochrome P450, PROTOPORPHYRIN IX CONTAINING FE 著者 Jiang, Y, Tian, X, Cong, Z. 登録日 2022-11-15 公開日 2023-08-16 実験手法 X-RAY DIFFRACTION (2.06 Å) 主引用文献 Enabling Peroxygenase Activity in Cytochrome P450 Monooxygenases by Engineering Hydrogen Peroxide Tunnels. J.Am.Chem.Soc., 145, 2023

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