PDB: 66507 件ウェブページステータス検索Chemie searchBIRD

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8AIP	Crystal Structure of Two-domain bacterial laccase from the actinobacterium Streptomyces carpinensis VKM Ac-1300 分子名称: COPPER (II) ION, OXYGEN MOLECULE, Two-Domain Laccase 著者 Gabdulkhakov, A.G, Tishchenko, T.V, Trubitsina, L, Trubitsin, I, Leontievsky, A, Lisov, A. 登録日 2022-07-27 公開日 2023-08-16 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 A Novel Two-Domain Laccase with Middle Redox Potential: Physicochemical and Structural Properties. Biochemistry Mosc., 88, 2023
7KWD	Crystal structure of Thermus thermophilus alkaline phosphatase 分子名称: Alkaline phosphatase, L(+)-TARTARIC ACID, MAGNESIUM ION, ... 著者 Gallo, G, Coelho, C, Borges, B, Negri, N, Maiello, F, Hardy, L, Wurtele, M. 登録日 2020-11-30 公開日 2021-04-14 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Dynamic cross correlation analysis of Thermus thermophilus alkaline phosphatase and determinants of thermostability. Biochim Biophys Acta Gen Subj, 1865, 2021
7R6H	RHCC in complex with o-carborane 分子名称: Tetrabrachion, ortho-carborane 著者 Heide, F, McDougall, M, Stetefeld, J. 登録日 2021-06-22 公開日 2021-07-07 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Boron rich nanotube drug carrier system is suited for boron neutron capture therapy. Sci Rep, 11, 2021
7RCA	Crystal structure of Aro2p chorismate synthase from Candida lusitaniae 分子名称: CHLORIDE ION, Chorismate synthase, SULFATE ION 著者 Stogios, P.J, Evdokimova, E, Di Leo, R, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID) 登録日 2021-07-07 公開日 2021-07-21 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.26 Å) 主引用文献 Crystal structure of Aro2p chorismate synthase from Candida lusitaniae To Be Published
7RGE	Crystal structure of phosphoadenylyl-sulfate (PAPS) reductase from Candida auris, phosphate complex 分子名称: 3'-phosphoadenylylsulfate reductase, GLYCEROL, PHOSPHATE ION 著者 Stogios, P.J, Evdokimova, E, Di Leo, R, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID) 登録日 2021-07-15 公開日 2021-07-28 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.38 Å) 主引用文献 Crystal structure of phosphoadenylyl-sulfate (PAPS) reductase from Candida auris, phosphate complex To Be Published
7RNV	SH2 domain of guanine nucleotide exchange factor Vav2 in complex with an actin peptide with phosphorylated tyrosine 53 分子名称: 1,2-ETHANEDIOL, Actin, alpha skeletal muscle, ... 著者 Dai, S, Horton, J.R, Cheng, X. 登録日 2021-07-29 公開日 2021-08-11 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 The Functional Analysis of a Major Tyrosine Phosphorylation Site on Actin To Be Published
7RNS	nSH2 domain of p85-alpha subunit of phosphatidylinositol 3-kinase in complex with an actin peptide with phosphorylated tyrosine 53 分子名称: 1,2-ETHANEDIOL, Actin, alpha skeletal muscle, ... 著者 Dai, S, Horton, J.R, Cheng, X. 登録日 2021-07-29 公開日 2021-08-11 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.14 Å) 主引用文献 The Functional Analysis of a Major Tyrosine Phosphorylation Site on Actin To Be Published
5XC7	Dengue Virus 4 NS3 Helicase D290A mutant 分子名称: CHLORIDE ION, GLYCEROL, NS3 Helicase 著者 Swarbrick, C.M.D, Basavannacharya, C, Chan, K.W.K, Chan, S.A, Singh, D, Wei, N, Phoo, W.W, Luo, D, Lescar, J, Vasudevan, S.G. 登録日 2017-03-22 公開日 2017-11-08 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 NS3 helicase from dengue virus specifically recognizes viral RNA sequence to ensure optimal replication Nucleic Acids Res., 45, 2017
5I2U	Crystal structure of a novel Halo-Tolerant Cellulase from Soil Metagenome 分子名称: Cellulase, GLYCEROL, MAGNESIUM ION, ... 著者 Garg, R, Brahma, V, Srivastava, R, Verma, L, Karthikeyan, S, Sahni, G. 登録日 2016-02-09 公開日 2017-01-18 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Biochemical and structural characterization of a novel halotolerant cellulase from soil metagenome Sci Rep, 6, 2016
7JM0	Crystal structure of aminoglycoside resistance enzyme ApmA, apoenzyme 分子名称: Aminocyclitol acetyltransferase ApmA, SULFATE ION 著者 Stogios, P.J, Evdokimova, E, Di Leo, R, Bordeleau, E, Wright, G.D, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID) 登録日 2020-07-30 公開日 2020-09-16 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.08 Å) 主引用文献 Crystal structure of aminoglycoside resistance enzyme ApmA, apoenzyme To Be Published
7JUN	Joint neutron/X-ray structure of SARS-CoV-2 3CL Mpro at room temperature 分子名称: 3C-like proteinase 著者 Kovalevsky, A, Kneller, D.W, Coates, L. 登録日 2020-08-20 公開日 2020-09-02 最終更新日 2024-04-03 実験手法 NEUTRON DIFFRACTION (2.3 Å), X-RAY DIFFRACTION 主引用文献 Unusual zwitterionic catalytic site of SARS-CoV-2 main protease revealed by neutron crystallography. J.Biol.Chem., 295, 2020
5XLF	Crystal structure of aerobically purified and aerobically crystallized D. vulgaris Miyazaki F [NiFe]-hydrogenase 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, FE3-S4 CLUSTER, IRON/SULFUR CLUSTER, ... 著者 Nishikawa, K, Mochida, S, Hiromoto, T, Shibata, N, Higuchi, Y. 登録日 2017-05-10 公開日 2018-06-06 実験手法 X-RAY DIFFRACTION (1.71 Å) 主引用文献 Ni-elimination from the active site of the standard [NiFe]‐hydrogenase upon oxidation by O2. J. Inorg. Biochem., 177, 2017
5INP	Mouse Tdp2 reaction product (5'-phosphorylated DNA)-Mn2+ complex 分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, DNA (5'-D(P*CP*CP*GP*AP*AP*TP*TP*CP*G)-3'), MANGANESE (II) ION, ... 著者 Schellenberg, M.J, Williams, R.S. 登録日 2016-03-07 公開日 2016-04-27 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.947 Å) 主引用文献 Reversal of DNA damage induced Topoisomerase 2 DNA-protein crosslinks by Tdp2. Nucleic Acids Res., 44, 2016
7K97	Human DNA polymerase beta dGDP product complex with Mn2+ 分子名称: DNA (5'-D(*CP*CP*GP*AP*CP*CP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*CP*G)-3'), DNA (5'-D(P*GP*TP*CP*GP*G)-3'), ... 著者 Varela, F.A, Freudenthal, B.D. 登録日 2020-09-28 公開日 2021-02-03 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Mechanism of Deoxyguanosine Diphosphate Insertion by Human DNA Polymerase beta. Biochemistry, 60, 2021
7K96	Human DNA polymerase beta ternary complex with templating cytosine and incoming deoxyguanosine diphosphate 分子名称: 1,2-ETHANEDIOL, 2'-DEOXYGUANOSINE-5'-DIPHOSPHATE, CALCIUM ION, ... 著者 Varela, F.A, Freudenthal, B.D. 登録日 2020-09-28 公開日 2021-02-03 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Mechanism of Deoxyguanosine Diphosphate Insertion by Human DNA Polymerase beta. Biochemistry, 60, 2021
7K9Z	Crystal structure of SARS-CoV-2 receptor binding domain in complex with the Fab fragments of neutralizing antibodies 298 and 52 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 298 Fab Heavy Chain, 298 Fab Light Chain, ... 著者 Newton, J.C, Kucharska, I, Rujas, E, Cui, H, Julien, J.P. 登録日 2020-09-29 公開日 2020-10-28 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.95 Å) 主引用文献 Multivalency transforms SARS-CoV-2 antibodies into ultrapotent neutralizers. Nat Commun, 12, 2021
7Q3B	Crystal structure of human STING in complex with 3'3'-c-(2'F,2'dA-isonucA)MP 分子名称: 3'3'-c-(2'F,2'dA-isonucA)MP, Stimulator of interferon genes protein 著者 Smola, M, Klima, M, Boura, E. 登録日 2021-10-27 公開日 2022-06-15 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.55733919 Å) 主引用文献 Discovery of isonucleotidic CDNs as potent STING agonists with immunomodulatory potential. Structure, 30, 2022
5XLG	Crystal structure of anaerobically purified and aerobically crystallized D. vulgaris Miyazaki F [NiFe]-hydrogenase 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, FE3-S4 CLUSTER, ... 著者 Nishikawa, K, Mochida, S, Hiromoto, T, Shibata, N, Higuchi, Y. 登録日 2017-05-10 公開日 2018-06-06 実験手法 X-RAY DIFFRACTION (1.64 Å) 主引用文献 Ni-elimination from the active site of the standard [NiFe]‐hydrogenase upon oxidation by O2. J. Inorg. Biochem., 177, 2017
5YJM	Human chymase in complex with 7-oxo-3-(phenoxyimino)-1,4-diazepane derivative 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-amino-4-((R)-1-((R,Z)-6-(5-chloro-2-methoxybenzyl)-7-oxo-3-(phenoxyimino)-1,4-diazepane-1-carboxamido)propyl)benzoic acid, ZINC ION, ... 著者 Sugawara, H. 登録日 2017-10-11 公開日 2017-12-27 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structure-based design, synthesis, and binding mode analysis of novel and potent chymase inhibitors Bioorg. Med. Chem. Lett., 28, 2018
7RB5	Room temperature structure of hAChE in complex with substrate analog 4K-TMA 分子名称: 4,4-DIHYDROXY-N,N,N-TRIMETHYLPENTAN-1-AMINIUM, Acetylcholinesterase 著者 Kovalevsky, A, Gerlits, O, Radic, Z. 登録日 2021-07-05 公開日 2021-09-22 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Room temperature crystallography of human acetylcholinesterase bound to a substrate analogue 4K-TMA: Towards a neutron structure Curr Res Struct Biol, 3, 2021
5YOH	Mycobacterium Tuberculosis Methionine aminopeptidase type 1c (C105M mutant) in complex with Methionine 分子名称: COBALT (II) ION, GLYCEROL, METHIONINE, ... 著者 Sandeep, C.B, Addlagatta, A. 登録日 2017-10-27 公開日 2018-11-07 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.63 Å) 主引用文献 Mycobacterium Tuberculosis Methionine aminopeptidase type 1c (C105M mutant) in complex with Methionine To Be Published
5HF2	Staphylococcus aureus Dihydrofolate Reductase complexed with cyclized alpha-NADPH anomer and 3'-(3-(2,4-diamino-6-ethylpyrimidin-5-yl)prop-2-yn-1-yl)-5'-methoxy-[1,1'-biphenyl]-4-carboxylic acid (UCP1175) 分子名称: 4-[3-[3-[2,4-bis(azanyl)-6-ethyl-pyrimidin-5-yl]prop-2-ynyl]-5-methoxy-phenyl]benzoic acid, Dihydrofolate reductase, GLYCEROL, ... 著者 Reeve, S.M, Anderson, A.C. 登録日 2016-01-06 公開日 2017-01-18 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (1.81 Å) 主引用文献 Staphylococcus aureus Dihydrofolate Reductase complexed with cyclized alpha-NADPH anomer and 3'-(3-(2,4-diamino-6-ethylpyrimidin-5-yl)prop-2-yn-1-yl)-5'-methoxy-[1,1'-biphenyl]-4-carboxylic acid (UCP1175) To Be Published
5HFS	CRYSTAL STRUCTURE OF C-TERMINAL DOMAIN OF CARGO PROTEINS OF TYPE IX SECRETION SYSTEM 分子名称: CALCIUM ION, Gingipain R2, ZINC ION 著者 Golik, P, Szmigielski, B, Ksiazek, M, Nowakowska, Z, Mizgalska, D, Nowak, M, Dubin, G, Potempa, J. 登録日 2016-01-07 公開日 2016-04-06 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.97 Å) 主引用文献 The outer-membrane export signal of Porphyromonas gingivalis type IX secretion system (T9SS) is a conserved C-terminal beta-sandwich domain. Sci Rep, 6, 2016
7LA9	Crystal structure of the first bromodomain (BD1) of human BRD4 (BRD4-1) in complex with bivalent inhibitor NC-III-49-1 分子名称: 1,2-ETHANEDIOL, Bromodomain-containing protein 4, CHLORIDE ION, ... 著者 Karim, M.R, Schonbrunn, E. 登録日 2021-01-06 公開日 2022-01-12 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Bivalent BET Bromodomain Inhibitors Confer Increased Potency and Selectivity for BRDT via Protein Conformational Plasticity. J.Med.Chem., 65, 2022
5YMR	The Crystal Structure of IseG 分子名称: 2-hydroxyethylsulfonic acid, Formate acetyltransferase, GLYCEROL 著者 Lin, L, Zhang, J, Xing, M, Hua, G, Guo, C, Hu, Y, Wei, Y, Ang, E, Zhao, H, Zhang, Y, Yuchi, Z. 登録日 2017-10-22 公開日 2019-03-20 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Radical-mediated C-S bond cleavage in C2 sulfonate degradation by anaerobic bacteria. Nat Commun, 10, 2019

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