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4E6W
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ClbP in complex with 3-aminophenyl boronic acid
分子名称: ClbP peptidase, M-AMINOPHENYLBORONIC ACID, PHOSPHATE ION
著者Cougnoux, A, Delmas, J, Bonnet, R.
登録日2012-03-16
公開日2013-03-27
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献The NRP peptidase ClbP as a target for the inhibition of genotoxicity, cell proliferation and tumorogenesis mediated by pks-harboring bacteria
To be Published
4AM3
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Crystal structure of C. crescentus PNPase bound to RNA
分子名称: PHOSPHATE ION, POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE, RNA, ...
著者Hardwick, S.W, Gubbey, T, Hug, I, Jenal, U, Luisi, B.F.
登録日2012-03-07
公開日2012-04-18
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal Structure of Caulobacter Crescentus Polynucleotide Phosphorylase Reveals a Mechanism of RNA Substrate Channelling and RNA Degradosome Assembly.
Open Biol., 2, 2012
1CZ8
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VASCULAR ENDOTHELIAL GROWTH FACTOR IN COMPLEX WITH AN AFFINITY MATURED ANTIBODY
分子名称: HEAVY CHAIN OF NEUTRALIZING ANTIBODY, LIGHT CHAIN OF NEUTRALIZING ANTIBODY, SULFATE ION, ...
著者Chen, Y, Wiesmann, C, Fuh, G, Li, B, Christinger, H.W, McKay, P, de Vos, A.M, Lowman, H.B.
登録日1999-09-01
公開日2000-03-20
最終更新日2017-04-05
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Selection and analysis of an optimized anti-VEGF antibody: crystal structure of an affinity-matured Fab in complex with antigen.
J.Mol.Biol., 293, 1999
3WJJ
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Crystal structure of IIb selective Fc variant, Fc(P238D), in complex with FcgRIIb
分子名称: Ig gamma-1 chain C region, Low affinity immunoglobulin gamma Fc region receptor II-b, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose
著者Kadono, S, Mimoto, F, Katada, H, Igawa, T, Kuramochi, T, Muraoka, M, Wada, Y, Haraya, K, Miyazaki, T, Hattori, K.
登録日2013-10-10
公開日2013-11-13
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Engineered antibody Fc variant with selectively enhanced Fc gamma RIIb binding over both Fc gamma RIIaR131 and Fc gamma RIIaH131.
Protein Eng.Des.Sel., 26, 2013
3WNN
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BU of 3wnn by Molmil
D308A mutant of Bacillus circulans T-3040 cycloisomaltooligosaccharide glucanotransferase complexed with isomaltooctaose
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, Cycloisomaltooligosaccharide glucanotransferase, ...
著者Suzuki, N, Fujimoto, Z, Kim, Y.M, Momma, M, Kishine, N, Suzuki, R, Suzuki, S, Kitamura, S, Kobayashi, M, Kimura, A, Funane, K.
登録日2013-12-10
公開日2014-02-05
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structural elucidation of the cyclization mechanism of alpha-1,6-glucan by Bacillus circulans T-3040 cycloisomaltooligosaccharide glucanotransferase.
J.Biol.Chem., 289, 2014
1CXK
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COMPLEX BETWEEN A MALTONONAOSE SUBSTRATE AND BACILLUS CIRCULANS STRAIN 251 CGTASE E257Q/D229N
分子名称: CALCIUM ION, PROTEIN (CYCLODEXTRIN-GLYCOSYLTRANSFERASE), alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, ...
著者Uitdehaag, J.C.M, Kalk, K.H, Dijkstra, B.W.
登録日1999-02-24
公開日1999-05-03
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献X-ray structures along the reaction pathway of cyclodextrin glycosyltransferase elucidate catalysis in the alpha-amylase family.
Nat.Struct.Biol., 6, 1999
4B09
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Structure of unphosphorylated BaeR dimer
分子名称: HEXATANTALUM DODECABROMIDE, TRANSCRIPTIONAL REGULATORY PROTEIN BAER
著者Choudhury, H, Beis, K.
登録日2012-06-29
公開日2013-07-10
最終更新日2013-09-25
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献The Dimeric Form of the Unphosphorylated Response Regulator Baer.
Protein Sci., 22, 2013
4AVV
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BU of 4avv by Molmil
Structure of CPHPC bound to Serum Amyloid P Component
分子名称: (2R)-1-[6-[(2R)-2-carboxypyrrolidin-1-yl]-6-oxidanylidene-hexanoyl]pyrrolidine-2-carboxylic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Kolstoe, S.E, Jenvey, M.C, Wood, S.P.
登録日2012-05-29
公開日2013-06-19
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Interaction of Serum Amyloid P Component with Hexanoyl Bis(D-Proline) (Cphpc)
Acta Crystallogr.,Sect.D, 70, 2014
4CVQ
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CRYSTAL STRUCTURE OF AN AMINOTRANSFERASE FROM ESCHERICHIA COLI AT 2. 11 ANGSTROEM RESOLUTION
分子名称: ACETATE ION, GLUTAMATE-PYRUVATE AMINOTRANSFERASE ALAA, GLYCEROL, ...
著者Penya-Soler, E, Fernandez, F.J, Lopez-Estepa, M, Garces, F, Richardson, A.J, Rudd, K.E, Coll, M, Vega, M.C.
登録日2014-03-28
公開日2014-07-23
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.11 Å)
主引用文献Structural analysis and mutant growth properties reveal distinctive enzymatic and cellular roles for the three major L-alanine transaminases of Escherichia coli.
PLoS ONE, 9, 2014
4CVP
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Structure of Apobacterioferritin
分子名称: BACTERIOFERRITIN, FE (III) ION
著者Hingorani, K, Pace, R, Whitney, S, Murray, J.W, Wydrzynski, T, Cheah, M.H, Smith, P, Hillier, W.
登録日2014-03-28
公開日2014-08-20
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.11 Å)
主引用文献Photo-Oxidation of Tyrosine in a Bio-Engineered Bacterioferritin 'Reaction Centre'-A Protein Model for Artificial Photosynthesis.
Biochim.Biophys.Acta, 1837, 2014
4EVN
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BU of 4evn by Molmil
Crystal Structure of Fab CR6261 (somatic heavy chain with germline-reverted light chain)
分子名称: Fab Heavy Chain, Fab Lambda Light Chain
著者Whittle, J.R.R.
登録日2012-04-26
公開日2012-08-29
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (2.851 Å)
主引用文献Structural and genetic basis for development of broadly neutralizing influenza antibodies.
Nature, 489, 2012
1HNS
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H-NS (DNA-BINDING DOMAIN)
分子名称: H-NS
著者Shindo, H, Iwaki, T, Ieda, R, Kurumizaka, H, Ueguchi, C, Mizuno, T, Morikawa, S, Nakamura, H, Kuboniwa, H.
登録日1995-04-06
公開日1995-07-10
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure of the DNA binding domain of a nucleoid-associated protein, H-NS, from Escherichia coli.
FEBS Lett., 360, 1995
2KZS
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BU of 2kzs by Molmil
DAXX helical bundle (DHB) domain
分子名称: Death-associated protein 6
著者Escobar-Cabrera, E, Lau, D.K.W, Giovinazzi, S, Ishov, A.M, McIntosh, L.P.
登録日2010-06-23
公開日2010-12-15
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural Characterization of the DAXX N-Terminal Helical Bundle Domain and Its Complex with Rassf1C.
Structure, 18, 2010
4OBR
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BU of 4obr by Molmil
Crystal structure of human alpha-L-iduronidase complex with alpha-L-iduronic acid
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Alpha-L-iduronidase, ...
著者Bie, H.Y, Yin, J, He, X, Kermode, A.R, James, M.N.G.
登録日2014-01-07
公開日2015-01-14
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.46 Å)
主引用文献Crystal structure of human alpha-L-iduronidase complex with alpha-L-iduronic acid
To be Published
1NI8
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H-NS dimerization motif
分子名称: DNA-binding protein H-NS
著者Bloch, V, Yang, Y, Margeat, E, Chavanieu, A, Aug, M.T, Robert, B, Arold, S, Rimsky, S, Kochoyan, M.
登録日2002-12-22
公開日2003-02-18
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献The H-NS dimerisation domain defines a new fold contributing to DNA recognition
Nat.Struct.Biol., 10, 2003
1IFH
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BU of 1ifh by Molmil
A DETAILED ANALYSIS OF THE FREE AND BOUND CONFORMATION OF AN ANTIBODY: X-RAY STRUCTURES OF ANTI-PEPTIDE FAB 17(SLASH)9 AND THREE DIFFERENT FAB-PEPTIDE COMPLEXES
分子名称: IGG2A-KAPPA 17/9 FAB (HEAVY CHAIN), IGG2A-KAPPA 17/9 FAB (LIGHT CHAIN), INFLUENZA HEMAGGLUTININ HA1 (STRAIN X47) (RESIDUES 101-107)
著者Schulze-Gahmen, U, Wilson, I.A.
登録日1993-05-06
公開日1993-10-31
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Detailed analysis of the free and bound conformations of an antibody. X-ray structures of Fab 17/9 and three different Fab-peptide complexes.
J.Mol.Biol., 234, 1993
4P9H
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Crystal structure of 8ANC195 Fab in complex with gp120 of 93TH057 HIV-1 and soluble CD4 D1D2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
著者Scharf, L, Bjorkman, P.J.
登録日2014-04-04
公開日2014-05-21
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Antibody 8ANC195 Reveals a Site of Broad Vulnerability on the HIV-1 Envelope Spike.
Cell Rep, 7, 2014
1O7D
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BU of 1o7d by Molmil
The structure of the bovine lysosomal a-mannosidase suggests a novel mechanism for low pH activation
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Heikinheimo, P, Helland, R, Leiros, H.S, Leiros, I, Karlsen, S, Evjen, G, Ravelli, R, Schoehn, G, Ruigrok, R, Tollersrud, O.-K, Mcsweeney, S, Hough, E.
登録日2002-10-30
公開日2003-03-20
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献The Structure of Bovine Lysosomal Alpha-Mannosidase Suggests a Novel Mechanism for Low-Ph Activation
J.Mol.Biol., 327, 2003
4PY7
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Crystal Structure of Fab 3.1
分子名称: antibody 3.1 heavy chain, antibody 3.1 light chain
著者Dreyfus, C.
登録日2014-03-26
公開日2014-05-21
最終更新日2014-06-04
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Alternative Recognition of the Conserved Stem Epitope in Influenza A Virus Hemagglutinin by a VH3-30-Encoded Heterosubtypic Antibody.
J.Virol., 88, 2014
1OP8
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Crystal Structure of Human Granzyme A
分子名称: Granzyme A, SULFATE ION
著者Hink-Schauer, C, Estebanez-Perpina, E, Bode, W, Jenne, D.
登録日2003-03-05
公開日2003-07-01
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of the apoptosis-inducing human granzyme A dimer
NAT.STRUCT.BIOL., 10, 2003
4PY8
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Crystal structure of Fab 3.1 in complex with the 1918 influenza virus hemagglutinin
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin HA1 chain, ...
著者Dreyfus, C.
登録日2014-03-26
公開日2014-05-21
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.91 Å)
主引用文献Alternative Recognition of the Conserved Stem Epitope in Influenza A Virus Hemagglutinin by a VH3-30-Encoded Heterosubtypic Antibody.
J.Virol., 88, 2014
2MFU
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Solution NMR structure of quadruplex d(TGGGTTTGGGTTGGGTTTGGG) in sodium conditions
分子名称: 5'-D(*TP*GP*GP*GP*TP*TP*TP*GP*GP*GP*TP*TP*GP*GP*GP*TP*TP*TP*GP*GP*G)-3'
著者Karsisiotis, A, Dillon, P, Webba da Silva, M.
登録日2013-10-23
公開日2014-10-29
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution NMR structure of quadruplex d(TGGGTTTGGGTTGGGTTTGGG) in sodium conditions
To be Published
3RGO
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Crystal Structure of PTPMT1
分子名称: Protein-tyrosine phosphatase mitochondrial 1, SULFATE ION
著者Xiao, J, Engel, J.L.
登録日2011-04-08
公開日2011-07-06
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.928 Å)
主引用文献Structural and functional analysis of PTPMT1, a phosphatase required for cardiolipin synthesis.
Proc.Natl.Acad.Sci.USA, 108, 2011
2MNY
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NMR Structure of KDM5B PHD1 finger
分子名称: Lysine-specific demethylase 5B, ZINC ION
著者Zhang, Y, Yang, H.R, Guo, X, Rong, N.Y, Song, Y.J, Xu, Y.W, Lan, W.X, Xu, Y.H, Cao, C.
登録日2014-04-16
公開日2014-08-06
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献The PHD1 finger of KDM5B recognizes unmodified H3K4 during the demethylation of histone H3K4me2/3 by KDM5B.
Protein Cell, 5, 2014
2M6W
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Solution NMR structure of the d(GGGGTTGGGGTTTTGGGGAAGGGG) quadruplex in sodium conditions
分子名称: DNA (5'-D(*GP*GP*GP*GP*TP*TP*GP*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*GP*AP*AP*GP*GP*GP*G)-3')
著者Karsisiotis, A.I, Webba da Silva, M.
登録日2013-04-19
公開日2014-07-23
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Encoding canonical DNA quadruplex structure.
Sci Adv, 4, 2018

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