Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2FLD
DownloadVisualize
BU of 2fld by Molmil
I-MsoI Re-Designed for Altered DNA Cleavage Specificity
分子名称: 5'-D(*CP*GP*GP*AP*AP*CP*GP*GP*TP*CP*TP*CP*AP*CP*GP*AP*CP*CP*TP*TP*CP*TP*GP*C)-3', 5'-D(*GP*CP*AP*GP*AP*AP*GP*GP*TP*CP*GP*TP*GP*AP*GP*AP*CP*CP*GP*TP*TP*CP*CP*G)-3', CALCIUM ION, ...
著者Ashworth, J, Duarte, C.M, Havranek, J.J, Sussman, D, Monnat, R.J, Stoddard, B.L, Baker, D.
登録日2006-01-05
公開日2006-06-06
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Computational redesign of endonuclease DNA binding and cleavage specificity.
Nature, 441, 2006
2EVM
DownloadVisualize
BU of 2evm by Molmil
crystal structure of methionine aminopeptidase in complex with 5-(2,5-dichlorophenyl)furan-2-carboxylic acid
分子名称: 5-(2,5-DICHLOROPHENYL)-2-FUROIC ACID, MANGANESE (II) ION, Methionine aminopeptidase, ...
著者Huang, W.-J.
登録日2005-10-31
公開日2006-03-28
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural analysis of metalloform-selective inhibition of methionine aminopeptidase.
Acta Crystallogr.,Sect.D, 62, 2006
7E4A
DownloadVisualize
BU of 7e4a by Molmil
Crystal structure of MIF bound to compound 13
分子名称: CHLORIDE ION, Flavoxate, Macrophage migration inhibitory factor, ...
著者Fa, C.P, Guo, D.Y, Yang, L.
登録日2021-02-11
公開日2023-02-15
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.475 Å)
主引用文献Identification and Structure-Activity Relationships of Dietary Flavonoids as Human Macrophage Migration Inhibitory Factor (MIF) Inhibitors.
J.Agric.Food Chem., 69, 2021
7E4C
DownloadVisualize
BU of 7e4c by Molmil
Crystal structure of MIF bound to compound11
分子名称: 4-[(3R)-8,8-dimethyl-3,4-dihydro-2H,8H-pyrano[2,3-f]chromen-3-yl]benzene-1,3-diol, CHLORIDE ION, Macrophage migration inhibitory factor, ...
著者Fan, C.P, Guo, D.Y, Yang, L.
登録日2021-02-11
公開日2023-02-15
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.644 Å)
主引用文献Identification and Structure-Activity Relationships of Dietary Flavonoids as Human Macrophage Migration Inhibitory Factor (MIF) Inhibitors.
J.Agric.Food Chem., 69, 2021
2F8G
DownloadVisualize
BU of 2f8g by Molmil
HIV-1 protease mutant I50V complexed with inhibitor TMC114
分子名称: (3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE, ACETIC ACID, CHLORIDE ION, ...
著者Kovalevsky, A.Y, Weber, I.T.
登録日2005-12-02
公開日2006-03-07
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.22 Å)
主引用文献Effectiveness of Nonpeptide Clinical Inhibitor TMC-114 on HIV-1 Protease with Highly Drug Resistant Mutations D30N, I50V, and L90M.
J.Med.Chem., 49, 2006
7EY3
DownloadVisualize
BU of 7ey3 by Molmil
Double cysteine mutations in T1 lipase
分子名称: CALCIUM ION, CHLORIDE ION, SODIUM ION, ...
著者Hamdan, S.H, Leow, T.C, Yahaya, N.M, Ali, M.S.M, Jonet, M.A, Mohamad Aris, S.N.A, Maiangwa, J.
登録日2021-05-29
公開日2022-12-14
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Knotting terminal ends of mutant T1 lipase with disulfide bond improved structure rigidity and stability.
Appl.Microbiol.Biotechnol., 107, 2023
7FDR
DownloadVisualize
BU of 7fdr by Molmil
7-FE FERREDOXIN FROM AZOTOBACTER VINELANDII, NA DITHIONITE REDUCED, PH 8.5, 1.4A RESOLUTION, 100 K
分子名称: FE3-S4 CLUSTER, IRON/SULFUR CLUSTER, PROTEIN (7-FE FERREDOXIN I)
著者Schipke, C.G, Goodin, D.B, Mcree, D.E, Stout, C.D.
登録日1998-12-11
公開日1998-12-16
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Oxidized and reduced Azotobacter vinelandii ferredoxin I at 1.4 A resolution: conformational change of surface residues without significant change in the [3Fe-4S]+/0 cluster.
Biochemistry, 38, 1999
2GG3
DownloadVisualize
BU of 2gg3 by Molmil
Novel bacterial methionine aminopeptidase inhibitors
分子名称: 4-(4-FLUORO-PHENYLAZO)-5-IMINO-5H-PYRAZOL-3-YLAMINE, COBALT (II) ION, Methionine aminopeptidase, ...
著者Evdokimov, A.G, Pokross, M.E, Walter, R.L, Mekel, M.
登録日2006-03-23
公開日2006-06-13
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Serendipitous discovery of novel bacterial methionine aminopeptidase inhibitors.
Proteins, 66, 2007
2GIJ
DownloadVisualize
BU of 2gij by Molmil
Q138F HincII bound to cognate DNA GTTAAC and Ca2+
分子名称: 5'-D(*GP*CP*CP*GP*GP*TP*TP*AP*AP*CP*CP*GP*GP*C)-3', CALCIUM ION, SODIUM ION, ...
著者Horton, N.C, Joshi, H.K.
登録日2006-03-28
公開日2006-07-18
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Alteration of Sequence Specificity of the Type II Restriction Endonuclease HincII through an Indirect Readout Mechanism.
J.Biol.Chem., 281, 2006
2GHE
DownloadVisualize
BU of 2ghe by Molmil
Conformational mobility in the active site of a heme peroxidase
分子名称: PROTOPORPHYRIN IX CONTAINING FE, SODIUM ION, cytosolic ascorbate peroxidase 1
著者Badyal, S.K, Joyce, M.G, Sharp, K.H, Raven, E.L, Moody, P.C.E.
登録日2006-03-27
公開日2006-06-13
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Conformational Mobility in the Active Site of a Heme Peroxidase.
J.Biol.Chem., 281, 2006
2GGC
DownloadVisualize
BU of 2ggc by Molmil
Novel bacterial methionine aminopeptidase inhibitors
分子名称: COBALT (II) ION, METHIONINE, Methionine aminopeptidase, ...
著者Evdokimov, A.G, Pokross, M.E, Walter, R.L, Mekel, M.
登録日2006-03-23
公開日2006-06-13
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Serendipitous discovery of novel bacterial methionine aminopeptidase inhibitors.
Proteins, 66, 2007
2GIT
DownloadVisualize
BU of 2git by Molmil
Human Class I MHC HLA-A2 in complex with the modified HTLV-1 TAX (Y5K-4-[3-Indolyl]-butyric acid) peptide
分子名称: Beta-2-microglobulin, FORMIC ACID, GLYCEROL, ...
著者Borbulevych, O.Y, Baker, B.M.
登録日2006-03-29
公開日2006-10-03
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献T Cell Receptor Recognition via Cooperative Conformational Plasticity.
J.Mol.Biol., 363, 2006
2GIE
DownloadVisualize
BU of 2gie by Molmil
HincII bound to cognate DNA GTTAAC
分子名称: 5'-D(*GP*CP*CP*GP*GP*TP*TP*AP*AP*CP*CP*GP*G)-3', SODIUM ION, Type II restriction enzyme HincII
著者Horton, N.C, Joshi, H.K, Etzkorn, C, Chatwell, L, Bitinaite, J.
登録日2006-03-28
公開日2006-07-18
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Alteration of Sequence Specificity of the Type II Restriction Endonuclease HincII through an Indirect Readout Mechanism.
J.Biol.Chem., 281, 2006
2GN2
DownloadVisualize
BU of 2gn2 by Molmil
Crystal structure of tetrameric biodegradative threonine deaminase (TdcB) from Salmonella typhimurium in complex with CMP at 2.5A resolution (Hexagonal form)
分子名称: CYTIDINE-5'-MONOPHOSPHATE, SODIUM ION, Threonine dehydratase catabolic
著者Simanshu, D.K, Savithri, H.S, Murthy, M.R.N.
登録日2006-04-09
公開日2006-11-07
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structures of Salmonella typhimurium biodegradative threonine deaminase and its complex with CMP provide structural insights into ligand-induced oligomerization and enzyme activation.
J.Biol.Chem., 281, 2006
2CKR
DownloadVisualize
BU of 2ckr by Molmil
X-RAY CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF THERMOBIFIDA FUSCA ENDOGLUCANASE CEL5A (E5) E355Q IN COMPLEX WITH CELLOTETRAOSE
分子名称: BENZAMIDINE, ENDOGLUCANASE E-5, SODIUM ION, ...
著者Berglund, G.I, Gualfetti, P.J, Requadt, C, Gross, L.S, Bergfors, T, Shaw, A, Saldajeno, M, Mitchinson, C, Sandgren, M.
登録日2006-04-21
公開日2007-05-29
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献The Crystal Structure of the Catalytic Domain of Thermobifida Fusca Endoglucanase Cel5A in Complex with Cellotetraose
To be Published
2CN0
DownloadVisualize
BU of 2cn0 by Molmil
Complex of Recombinant Human Thrombin with a Designed Inhibitor
分子名称: 4-(1R,3AS,4R,8AS,8BR)-[1-DIFLUOROMETHYL-2-(4-FLUOROBENZYL)-3-OXODECAHYDROPYRROLO[3,4-A]PYRROLIZIN-4-YL]BENZAMIDINE, CALCIUM ION, HIRUDIN IIA, ...
著者Hoffmann-Roder, A, Schweizer, E, Egger, J, Seiler, P, Obst-Sander, U, Wagner, B, Kansy, M, Banner, D.W, Diederich, F.
登録日2006-05-17
公開日2006-11-06
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Mapping the Fluorophilicity of a Hydrophobic Pocket: Synthesis and Biological Evaluation of Tricyclic Thrombin Inhibitors Directing Fluorinated Alkyl Groups Into the P Pocket
Chemmedchem, 1, 2006
2GU1
DownloadVisualize
BU of 2gu1 by Molmil
Crystal structure of a zinc containing peptidase from vibrio cholerae
分子名称: SODIUM ION, ZINC ION, Zinc peptidase
著者Sugadev, R, Kumaran, D, Swaminathan, S, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2006-04-28
公開日2006-07-04
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of a putative lysostaphin peptidase from Vibrio cholerae.
Proteins, 72, 2008
2GLN
DownloadVisualize
BU of 2gln by Molmil
Crystal structure of Mycobacterium tuberculosis trHbN, GlnE11Ala mutant
分子名称: CYANIDE ION, Hemoglobin-like protein HbN, PHOSPHATE ION, ...
著者Milani, M, Bolognesi, M.
登録日2006-04-05
公開日2006-09-19
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Ligand interactions in the distal heme pocket of Mycobacterium tuberculosis truncated hemoglobin N: roles of TyrB10 and GlnE11 residues
Biochemistry, 45, 2006
2GUO
DownloadVisualize
BU of 2guo by Molmil
Human Class I MHC HLA-A2 in complex with the native nonameric Melan-A/MART-1(27-35) peptide
分子名称: Beta-2-microglobulin, GLYCEROL, HLA class I histocompatibility antigen, ...
著者Borbulevych, O.Y, Baker, B.M.
登録日2006-05-01
公開日2007-06-12
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structures of MART-1(26/27-35) Peptide/HLA-A2 Complexes Reveal a Remarkable Disconnect between Antigen Structural Homology and T Cell Recognition
J.Mol.Biol., 372, 2007
2GYQ
DownloadVisualize
BU of 2gyq by Molmil
YcfI, a putative structural protein from Rhodopseudomonas palustris.
分子名称: 1,2-ETHANEDIOL, ACETATE ION, FE (III) ION, ...
著者Osipiuk, J, Evdokimova, E, Kudritska, M, Savchenko, A, Edwards, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2006-05-09
公開日2006-06-13
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献X-ray crystal structure of YcfI protein, a putative structural protein from Rhodopseudomonas palustris.
To be Published
2GKM
DownloadVisualize
BU of 2gkm by Molmil
Crystal structure of Mycobacterium tuberculosis trHbN TyrB10Phe mutant
分子名称: CYANIDE ION, Hemoglobin-like protein HbN, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Milani, M, Bolognesi, M.
登録日2006-04-03
公開日2006-09-19
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.731 Å)
主引用文献Ligand interactions in the distal heme pocket of Mycobacterium tuberculosis truncated hemoglobin N: roles of TyrB10 and GlnE11 residues
Biochemistry, 45, 2006
2GG8
DownloadVisualize
BU of 2gg8 by Molmil
Novel bacterial methionine aminopeptidase inhibitors
分子名称: COBALT (II) ION, METHYL N-[(2S,3R)-3-AMINO-2-HYDROXY-3-(4-METHYLPHENYL)PROPANOYL]-D-ALANYL-D-LEUCINATE, Methionine aminopeptidase, ...
著者Evdokimov, A.G, Pokross, M.E, Walter, R.L, Mekel, M.
登録日2006-03-23
公開日2006-06-13
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Serendipitous discovery of novel bacterial methionine aminopeptidase inhibitors.
Proteins, 66, 2007
2G78
DownloadVisualize
BU of 2g78 by Molmil
Crystal Structure of the R132K:Y134F Mutant of Cellular Retinoic Acid Binding Protein Type II in Complex with All-Trans-Retinoic Acid at 1.70 Angstroms Resolution
分子名称: Cellular retinoic acid-binding protein 2, RETINOIC ACID, SODIUM ION
著者Vaezeslami, S, Geiger, J.H.
登録日2006-02-27
公開日2007-04-17
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Protein design: reengineering cellular retinoic acid binding protein II into a rhodopsin protein mimic.
J.Am.Chem.Soc., 129, 2007
2G84
DownloadVisualize
BU of 2g84 by Molmil
Cytidine and deoxycytidylate deaminase zinc-binding region from Nitrosomonas europaea.
分子名称: 1,2-ETHANEDIOL, BETA-MERCAPTOETHANOL, Cytidine and deoxycytidylate deaminase zinc-binding region, ...
著者Osipiuk, J, Skarina, T, Onopriyenko, O, Savchenko, A, Edwards, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2006-03-01
公開日2006-04-04
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献X-ray crystal structure of Cytidine and deoxycytidylate deaminase zinc-binding region from Nitrosomonas europaea.
To be Published
2G2C
DownloadVisualize
BU of 2g2c by Molmil
Putative molybdenum cofactor biosynthesis protein from Corynebacterium diphtheriae.
分子名称: Putative molybdenum cofactor biosynthesis protein, SODIUM ION
著者Osipiuk, J, Li, H, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2006-02-15
公開日2006-03-28
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献X-ray crystal structure of putative molybdenum cofactor biosynthesis protein from Corynebacterium diphtheriae.
To be Published

226262

件を2024-10-16に公開中

PDB statisticsPDBj update infoContact PDBjnumon