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8D5E
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BU of 8d5e by Molmil
The complex of Gtf2b Peptide TGAASFDEF Presented by H2-Dd
分子名称: Beta-2-microglobulin, GLYCEROL, H-2 class I histocompatibility antigen, ...
著者Custodio, J.M.F, Baker, B.M.
登録日2022-06-04
公開日2022-07-06
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.46 Å)
主引用文献Structural and physical features that distinguish tumor-controlling from inactive cancer neoepitopes.
Proc.Natl.Acad.Sci.USA, 120, 2023
2HYE
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BU of 2hye by Molmil
Crystal Structure of the DDB1-Cul4A-Rbx1-SV5V Complex
分子名称: Cullin-4A, DNA damage-binding protein 1, Nonstructural protein V, ...
著者Angers, S, Li, T, Yi, X, MacCoss, M.J, Moon, R.T, Zheng, N.
登録日2006-08-05
公開日2006-10-03
最終更新日2017-10-18
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Molecular architecture and assembly of the DDB1-CUL4A ubiquitin ligase machinery.
Nature, 443, 2006
8D5F
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BU of 8d5f by Molmil
The complex of Gtf2b neoantigen TGAARFDEF Presented by H2-Dd
分子名称: Beta-2-microglobulin, GLYCEROL, H-2 class I histocompatibility antigen, ...
著者Custodio, J.M.F, Baker, B.M.
登録日2022-06-04
公開日2022-07-06
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献Structural and physical features that distinguish tumor-controlling from inactive cancer neoepitopes.
Proc.Natl.Acad.Sci.USA, 120, 2023
3NUX
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BU of 3nux by Molmil
CDK6 (monomeric) in complex with inhibitor
分子名称: 4-[5-chloro-3-(1-methylethyl)-1H-pyrazol-4-yl]-N-(5-piperazin-1-ylpyridin-2-yl)pyrimidin-2-amine, Cell division protein kinase 6
著者Chopra, R.
登録日2010-07-07
公開日2010-12-22
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献4-(Pyrazol-4-yl)-pyrimidines as selective inhibitors of cyclin-dependent kinase 4/6.
J.Med.Chem., 53, 2010
3NTP
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BU of 3ntp by Molmil
Human Pin1 complexed with reduced amide inhibitor
分子名称: (2R)-2-(acetylamino)-3-[(2S)-2-{[2-(1H-indol-3-yl)ethyl]carbamoyl}pyrrolidin-1-yl]propyl dihydrogen phosphate, 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL, Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1
著者Zhang, Y.
登録日2010-07-05
公開日2012-01-04
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.762 Å)
主引用文献A reduced-amide inhibitor of Pin1 binds in a conformation resembling a twisted-amide transition state.
Biochemistry, 50, 2011
3K4X
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BU of 3k4x by Molmil
Eukaryotic Sliding Clamp PCNA Bound to DNA
分子名称: DNA (5'-D(*CP*CP*CP*AP*TP*CP*GP*TP*AP*T)-3'), DNA (5'-D(*TP*TP*TP*TP*AP*TP*AP*CP*GP*AP*TP*GP*GP*G)-3'), Proliferating cell nuclear antigen
著者McNally, R, Kuriyan, J.
登録日2009-10-06
公開日2010-02-16
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.98 Å)
主引用文献Analysis of the role of PCNA-DNA contacts during clamp loading.
Bmc Struct.Biol., 10, 2010
3MHR
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BU of 3mhr by Molmil
14-3-3 sigma in complex with YAP pS127-peptide
分子名称: 14-3-3 protein sigma, CALCIUM ION, CHLORIDE ION, ...
著者Schumacher, B, Skwarczynska, M, Rose, R, Ottmann, C.
登録日2010-04-08
公開日2010-09-15
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Structure of a 14-3-3[sigma]-YAP phosphopeptide complex at 1.15 A resolution
Acta Crystallogr.,Sect.F, 66, 2010
3ODK
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BU of 3odk by Molmil
Discovery of cell-active phenyl-imidazole Pin1 inhibitors by structure-guided fragment evolution
分子名称: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, 3-pyridin-2-yl-1H-pyrazole-5-carboxylic acid, Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1
著者Potter, A, Oldfield, V, Nunns, C, Fromont, C, Ray, S, Northfield, C.J, Bryant, C.J, Scrace, S.F, Robinson, D, Matossova, N, Baker, L, Dokurno, P, Surgenor, A.E, Davis, B.E, Richardson, C.M, Murray, J.B, Moore, J.D.
登録日2010-08-11
公開日2010-10-27
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Discovery of cell-active phenyl-imidazole Pin1 inhibitors by structure-guided fragment evolution.
Bioorg.Med.Chem.Lett., 20, 2010
2KEQ
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BU of 2keq by Molmil
Solution structure of DnaE intein from Nostoc punctiforme
分子名称: DNA polymerase III alpha subunit, Nucleic acid binding OB-fold tRNA/helicase-type
著者Oeemig, J.S, Aranko, A.S, Djupsj, J.B, Iwai, H.
登録日2009-02-02
公開日2009-05-19
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of DnaE intein from Nostoc punctiforme: structural basis for the design of a new split intein suitable for site-specific chemical modification.
Febs Lett., 583, 2009
2JUP
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BU of 2jup by Molmil
FBP28WW2 domain in complex with the PPLIPPPP peptide
分子名称: Formin-1, Transcription elongation regulator 1
著者Ramirez-Espain, X, Ruiz, L, Martin-Malpartida, P, Oschkinat, H, Macias, M.J.
登録日2007-09-01
公開日2007-11-06
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structural Characterization of a New Binding Motif and a Novel Binding Mode in Group 2 WW Domains
J.Mol.Biol., 373, 2007
2K9H
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BU of 2k9h by Molmil
The hantavirus glycoprotein G1 tail contains a dual CCHC-type classical zinc fingers
分子名称: Glycoprotein, ZINC ION
著者Estrada, D.F, Boudreaux, D.M, Zhong, D, St Jeor, S.C, De Guzman, R.N.
登録日2008-10-13
公開日2009-01-27
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献The Hantavirus Glycoprotein G1 Tail Contains Dual CCHC-type Classical Zinc Fingers.
J.Biol.Chem., 284, 2009
2M13
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BU of 2m13 by Molmil
The ZZ domain of cytoplasmic polyadenylation element binding protein 1 (CPEB1)
分子名称: Cytoplasmic polyadenylation element-binding protein 1, ZINC ION
著者Lee, B.M, Merkel, D.J, Wells, S.B, Hilburn, B.C, Elazzouzi, F, Perez-Alvarado, G.C.
登録日2012-11-14
公開日2013-04-03
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献The C-Terminal Region of Cytoplasmic Polyadenylation Element Binding Protein Is a ZZ Domain with Potential for Protein-Protein Interactions.
J.Mol.Biol., 425, 2013
4HSA
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BU of 4hsa by Molmil
Structure of interleukin 17a in complex with il17ra receptor
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Interleukin-17 receptor A, ...
著者Liu, S.
登録日2012-10-29
公開日2013-05-22
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献Crystal structures of interleukin 17A and its complex with IL-17 receptor A.
Nat Commun, 4, 2013
2LIF
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BU of 2lif by Molmil
Solution Structure of KKGF
分子名称: Core protein p21
著者Montserret, R, Penin, F.
登録日2011-08-29
公開日2012-07-11
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural analysis of hepatitis C virus core-e1 signal Peptide and requirements for cleavage of the genotype 3a signal sequence by signal Peptide peptidase.
J.Virol., 86, 2012
5XF8
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BU of 5xf8 by Molmil
Cryo-EM structure of the Cdt1-MCM2-7 complex in AMPPNP state
分子名称: Cell division cycle protein CDT1, DNA replication licensing factor MCM2, DNA replication licensing factor MCM3, ...
著者Zhai, Y, Cheng, E, Wu, H, Li, N, Yung, P.Y, Gao, N, Tye, B.K.
登録日2017-04-09
公開日2017-05-03
実験手法ELECTRON MICROSCOPY (7.1 Å)
主引用文献Open-ringed structure of the Cdt1-Mcm2-7 complex as a precursor of the MCM double hexamer
Nat. Struct. Mol. Biol., 24, 2017
1SVB
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BU of 1svb by Molmil
ENVELOPE GLYCOPROTEIN FROM TICK-BORNE ENCEPHALITIS VIRUS
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, TICK-BORNE ENCEPHALITIS VIRUS GLYCOPROTEIN
著者Rey, F.A, Harrison, S.C.
登録日1995-11-27
公開日1996-06-10
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The envelope glycoprotein from tick-borne encephalitis virus at 2 A resolution.
Nature, 375, 1995
5FCW
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BU of 5fcw by Molmil
HDAC8 Complexed with a Hydroxamic Acid
分子名称: 4-naphthalen-1-yl-~{N}-oxidanyl-benzamide, GLYCEROL, HEXAETHYLENE GLYCOL, ...
著者Cole, K.E, Perry, K.
登録日2015-12-15
公開日2016-10-26
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.979 Å)
主引用文献Structure of 'linkerless' hydroxamic acid inhibitor-HDAC8 complex confirms the formation of an isoform-specific subpocket.
J.Struct.Biol., 195, 2016
5FH2
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BU of 5fh2 by Molmil
The structure of rat cytosolic PEPCK variant E89Q in complex with GTP
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, GUANOSINE-5'-TRIPHOSPHATE, MANGANESE (II) ION, ...
著者Johnson, T.A, Holyoak, T.
登録日2015-12-21
公開日2016-11-09
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献Utilization of Substrate Intrinsic Binding Energy for Conformational Change and Catalytic Function in Phosphoenolpyruvate Carboxykinase.
Biochemistry, 55, 2016
5FRF
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BU of 5frf by Molmil
Solution structure of reduced and zinc-bound RsrA
分子名称: ANTI-SIGMA FACTOR RSRA, ZINC ION
著者Zdanowski, K, Pecqueur, L, Werner, J, Potts, J.R, Kleanthous, C.
登録日2015-12-17
公開日2016-08-03
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献The Anti-Sigma Factor Rsra Responds to Oxidative Stress by Reburying its Hydrophobic Core.
Nat.Commun., 7, 2016
5XV8
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BU of 5xv8 by Molmil
Solution structure of the complex between UVSSA acidic region and TFIIH p62 PH domain
分子名称: General transcription factor IIH subunit 1, UV-stimulated scaffold protein A
著者Okuda, M, Nishimura, Y.
登録日2017-06-27
公開日2017-11-08
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Common TFIIH recruitment mechanism in global genome and transcription-coupled repair subpathways
Nucleic Acids Res., 45, 2017
5FH3
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BU of 5fh3 by Molmil
The structure of rat cytosolic PEPCK variant E89A in complex with oxalic acid and GTP
分子名称: GUANOSINE-5'-TRIPHOSPHATE, MANGANESE (II) ION, OXALATE ION, ...
著者Johnson, T.A, Holyoak, T.
登録日2015-12-21
公開日2016-11-09
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Utilization of Substrate Intrinsic Binding Energy for Conformational Change and Catalytic Function in Phosphoenolpyruvate Carboxykinase.
Biochemistry, 55, 2016
4I77
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BU of 4i77 by Molmil
Lebrikizumab Fab bound to IL-13
分子名称: Interleukin-13, Lebrikizumab heavy chain, Lebrikizumab light chain
著者Eigenbrot, C, Ultsch, M.
登録日2012-11-30
公開日2013-02-06
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural Basis of Signaling Blockade by Anti-IL-13 Antibody Lebrikizumab.
J.Mol.Biol., 425, 2013
5G1A
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BU of 5g1a by Molmil
Bordetella Alcaligenes HDAH bound to PFSAHA
分子名称: 2,2,3,3,4,4,5,5,6,6,7,7-dodecakis(fluoranyl)-~{N}-oxidanyl-~{N}'-phenyl-octanediamide, DI(HYDROXYETHYL)ETHER, HISTONE DEACETYLASE-LIKE AMIDOHYDROLASE, ...
著者Kraemer, A, Meyer-Almes, F.J, Yildiz, O.
登録日2016-03-24
公開日2017-04-12
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.42 Å)
主引用文献The thermodynamic signature of ligand binding to histone deacetylase-like amidohydrolases is most sensitive to the flexibility in the L2-loop lining the active site pocket.
Biochim. Biophys. Acta, 1861, 2017
2R6M
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BU of 2r6m by Molmil
Crystal structure of rat CK2-beta subunit
分子名称: Casein kinase II subunit beta, ZINC ION
著者Shen, Y.
登録日2007-09-06
公開日2008-09-23
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Crystal structures of catalytic and regulatory subunits of rat protein kinase CK2
CHIN.SCI.BULL., 54, 2009
5X6U
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BU of 5x6u by Molmil
Crystal structure of human heteropentameric complex
分子名称: Ragulator complex protein LAMTOR1, Ragulator complex protein LAMTOR2, Ragulator complex protein LAMTOR3, ...
著者Yonehara, R, Nada, S, Nakai, T, Nakai, M, Kitamura, A, Ogawa, A, Nakatsumi, H, Nakayama, K.I, Li, S, Standley, D.M, Yamashita, E, Nakagawa, A, Okada, M.
登録日2017-02-23
公開日2017-12-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural basis for the assembly of the Ragulator-Rag GTPase complex.
Nat Commun, 8, 2017

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