PDB: 183105 件ウェブページステータス検索Chemie searchBIRD

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3H8A	Crystal structure of E. coli enolase bound to its cognate RNase E recognition domain 分子名称: Enolase, MAGNESIUM ION, RNase E 著者 Nurmohamed, S, Luisi, B.F. 登録日 2009-04-29 公開日 2010-04-14 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Molecular recognition between Escherichia coli enolase and ribonuclease E. Acta Crystallogr.,Sect.D, 66, 2010
7BNL	Notum ARUK3003710 分子名称: (4~{E})-2-(3,4-dimethylphenyl)-4-[(1-methylpyrazol-4-yl)methylidene]-1,3-oxazol-5-one, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Zhao, Y, Jones, E.Y, Fish, P.V, Svensson, F, Steadman, D. 登録日 2021-01-22 公開日 2022-03-02 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.23 Å) 主引用文献 Notum Inhibitor ARUK3003710 To Be Published
3L6Y	Crystal structure of p120 catenin in complex with E-cadherin 分子名称: Catenin delta-1, E-cadherin 著者 Ishiyama, N, Lee, S.-H, Liu, S, Li, G.-Y, Smith, M.J, Reichardt, L.F, Ikura, M. 登録日 2009-12-27 公開日 2010-04-21 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Dynamic and static interactions between p120 catenin and E-cadherin regulate the stability of cell-cell adhesion. Cell(Cambridge,Mass.), 141, 2010
3L6X	Crystal structure of p120 catenin in complex with E-cadherin 分子名称: Catenin delta-1, E-cadherin, SULFATE ION 著者 Ishiyama, N, Lee, S.-H, Liu, S, Li, G.-Y, Smith, M.J, Reichardt, L.F, Ikura, M. 登録日 2009-12-27 公開日 2010-04-21 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Dynamic and static interactions between p120 catenin and E-cadherin regulate the stability of cell-cell adhesion. Cell(Cambridge,Mass.), 141, 2010
1IB6	CRYSTAL STRUCTURE OF R153C E. COLI MALATE DEHYDROGENASE 分子名称: MALATE DEHYDROGENASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SULFATE ION 著者 Bell, J.K, Yennawar, H.P, Wright, S.K, Thompson, J.R, Viola, R.E, Banaszak, L.J. 登録日 2001-03-27 公開日 2001-09-19 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structural Analyses of a Malate Dehydrogenase with a Variable Active Site J.Biol.Chem., 276, 2001
1IE3	CRYSTAL STRUCTURE OF R153C E. COLI MALATE DEHYDROGENASE 分子名称: MALATE DEHYDROGENASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, PYRUVIC ACID 著者 Bell, J.K, Yennawar, H.P, Wright, S.K, Thompson, J.R, Viola, R.E, Banaszak, L.J. 登録日 2001-04-05 公開日 2001-09-19 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structural Analyses of a Malate Dehydrogenase with a Variable Active Site J.Biol.Chem., 276, 2001
7JNE	Crystal structure of the substrate-binding domain of E. coli DnaK in complex with the peptide RGSQLRIASR 分子名称: Alkaline phosphatase peptide, Chaperone protein DnaK, SULFATE ION 著者 Jansen, R.M, Ozden, C, Gierasch, L.M, Garman, S.C. 登録日 2020-08-04 公開日 2020-08-26 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.54 Å) 主引用文献 Selective promiscuity in the binding of E. coli Hsp70 to an unfolded protein. Proc.Natl.Acad.Sci.USA, 118, 2021
2JSX	Solution structure of the E. coli Tat proofreading chaperone protein NapD 分子名称: Protein napD 著者 Spronk, C.A.E.M, Vuister, G.W, Sargent, F. 登録日 2007-07-17 公開日 2007-08-21 最終更新日 2024-05-08 実験手法 SOLUTION NMR 主引用文献 Structural diversity in twin-arginine signal peptide-binding proteins. Proc.Natl.Acad.Sci.Usa, 104, 2007
3VW7	Crystal structure of human protease-activated receptor 1 (PAR1) bound with antagonist vorapaxar at 2.2 angstrom 分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, CHLORIDE ION, Proteinase-activated receptor 1, ... 著者 Zhang, C, Srinivasan, Y, Arlow, D.H, Fung, J.J, Palmer, D, Zheng, Y, Green, H.F, Pandey, A, Dror, R.O, Shaw, D.E, Weis, W.I, Coughlin, S.R, Kobilka, B.K. 登録日 2012-08-07 公開日 2012-12-12 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 High-resolution crystal structure of human protease-activated receptor 1 Nature, 492, 2012
7JMM	Crystal structure of the substrate-binding domain of E. coli DnaK in complex with the peptide RAKNIILLSR 分子名称: Alkaline phosphatase, Chaperone protein DnaK, SULFATE ION 著者 Jansen, R.M, Ozden, C, Gierasch, L.M, Garman, S.C. 登録日 2020-08-02 公開日 2020-08-26 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.56 Å) 主引用文献 Selective promiscuity in the binding of E. coli Hsp70 to an unfolded protein. Proc.Natl.Acad.Sci.USA, 118, 2021
2I68	Cryo-EM based theoretical model structure of transmembrane domain of the multidrug-resistance antiporter from E. coli EmrE 分子名称: Protein emrE 著者 Fleishman, S.J, Harrington, S.E, Enosh, A, Halperin, D, Tate, C.G, Ben-Tal, N. 登録日 2006-08-28 公開日 2006-10-03 最終更新日 2024-03-13 実験手法 ELECTRON CRYSTALLOGRAPHY (7.5 Å) 主引用文献 Quasi-symmetry in the Cryo-EM Structure of EmrE Provides the Key to Modeling its Transmembrane Domain J.Mol.Biol., 364, 2006
7B9H	Crystal structure of the PDE4D catalytic domain in complex with GEBR-42a 分子名称: 1,2-ETHANEDIOL, 3-[(~{E})-1-(3-cyclopentyloxy-4-methoxy-phenyl)ethylideneamino]oxy-1-morpholin-4-yl-propan-1-one, MAGNESIUM ION, ... 著者 Torretta, A, Abbate, S, Parisini, E. 登録日 2020-12-14 公開日 2021-06-30 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Design, synthesis, biological evaluation and structural characterization of novel GEBR library PDE4D inhibitors. Eur.J.Med.Chem., 223, 2021
4P6F	Crystal structure of the peptolide 12C bound to bacterial ribosome 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Fagan, C.E, Dunham, C.M. 登録日 2014-03-24 公開日 2014-10-01 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (3.6 Å) 主引用文献 Macrolide-Peptide Conjugates as Probes of the Path of Travel of the Nascent Peptides through the Ribosome. Acs Chem.Biol., 9, 2014
4CEY	Crystal structure of human Enterovirus 71 in complex with the uncoating inhibitor NLD 分子名称: 1-(2-aminopyridin-4-yl)-3-[(3S)-5-{4-[(E)-(ethoxyimino)methyl]phenoxy}-3-methylpentyl]imidazolidin-2-one, SODIUM ION, VP1, ... 著者 De Colibus, L, Wang, X, Spyrou, J.A.B, Kelly, J, Ren, J, Grimes, J, Puerstinger, G, Stonehouse, N, Walter, T.S, Hu, Z, Wang, J, Li, X, Peng, W, Rowlands, D, Fry, E.E, Rao, Z, Stuart, D.I. 登録日 2013-11-12 公開日 2014-02-12 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.75 Å) 主引用文献 More-Powerful Virus Inhibitors from Structure-Based Analysis of Hev71 Capsid-Binding Molecules Nat.Struct.Mol.Biol., 21, 2014
2O99	The crystal structure of E.coli IclR C-terminal fragment in complex with glyoxylate 分子名称: 1,2-ETHANEDIOL, Acetate operon repressor, GLYCOLIC ACID 著者 Lunin, V.V, Ezersky, A, Evdokimova, E, Kudritska, M, Savchenko, A. 登録日 2006-12-13 公開日 2007-04-10 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Glyoxylate and Pyruvate Are Antagonistic Effectors of the Escherichia coli IclR Transcriptional Regulator. J.Biol.Chem., 282, 2007
4MKB	Hepatitis C Virus polymerase NS5B genotype 1b (BK) in complex with inhibitor 14 (N-(4-{(E)-2-[3-tert-butyl-2-methoxy-5-(3-oxo-2,3-dihydropyridazin-4-yl)phenyl]ethenyl}phenyl)methanesulfonamide) 分子名称: N-(4-{(E)-2-[3-tert-butyl-2-methoxy-5-(3-oxo-2,3-dihydropyridazin-4-yl)phenyl]ethenyl}phenyl)methanesulfonamide, RNA-DIRECTED RNA POLYMERASE 著者 Harris, S.F, Wong, A. 登録日 2013-09-04 公開日 2013-10-09 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Discovery of a Novel Series of Potent Non-Nucleoside Inhibitors of Hepatitis C Virus NS5B. J.Med.Chem., 56, 2013
4DL0	Crystal Structure of the heterotrimeric EGChead Peripheral Stalk Complex of the Yeast Vacuolar ATPase 分子名称: SULFATE ION, TRIMETHYL LEAD ION, V-type proton ATPase subunit C, ... 著者 Oot, R.A, Huang, L.S, Berry, E.A, Wilkens, S. 登録日 2012-02-05 公開日 2012-10-10 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.905 Å) 主引用文献 Crystal Structure of the Yeast Vacuolar ATPase Heterotrimeric EGC(head) Peripheral Stalk Complex. Structure, 20, 2012
2O9A	The crystal structure of the E.coli IclR C-terminal fragment in complex with pyruvate. 分子名称: 1,2-ETHANEDIOL, Acetate operon repressor, PYRUVIC ACID 著者 Lunin, V.V, Ezersky, A, Evdokimova, E, Kudritska, M, Savchenko, A. 登録日 2006-12-13 公開日 2007-04-10 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Glyoxylate and Pyruvate Are Antagonistic Effectors of the Escherichia coli IclR Transcriptional Regulator. J.Biol.Chem., 282, 2007
3S7H	Structure of thrombin mutant Y225P in the E* form 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Prothrombin 著者 Niu, W, Chen, Z, Gandhi, P, Vogt, A, Pozzi, N, Pele, L.A, Zapata, F, Di Cera, E. 登録日 2011-05-26 公開日 2011-07-06 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Crystallographic and Kinetic Evidence of Allostery in a Trypsin-like Protease. Biochemistry, 50, 2011
1Y55	Crystal structure of the C122S mutant of E. Coli expressed avidin related protein 4 (AVR4)-biotin complex 分子名称: Avidin-related protein 4/5, BIOTIN, FORMIC ACID 著者 Eisenberg-Domovich, Y, Hytonen, V.P, Wilchek, M, Bayer, E.A, Kulomaa, M.S, Livnah, O. 登録日 2004-12-02 公開日 2005-05-24 最終更新日 2021-11-10 実験手法 X-RAY DIFFRACTION (1 Å) 主引用文献 High-resolution crystal structure of an avidin-related protein: insight into high-affinity biotin binding and protein stability. Acta Crystallogr.,Sect.D, 61, 2005
3ZJV	Ternary complex of E .coli leucyl-tRNA synthetase, tRNA(Leu) and the benzoxaborole AN3213 in the editing conformation 分子名称: LEUCINE--TRNA LIGASE, TRNALEU5 UAA ISOACCEPTOR 著者 Cusack, S, Palencia, A, Crepin, T, Hernandez, V, Akama, T, Baker, S.J, Bu, W, Feng, L, Freund, Y.R, Liu, L, Meewan, M, Mohan, M, Mao, W, Rock, F.L, Sexton, H, Sheoran, A, Zhang, Y, Zhang, Y, Zhou, Y, Nieman, J.A, Anugula, M.R, Keramane, E.M, Savariraj, K, Reddy, D.S, Sharma, R, Subedi, R, Singh, R, OLeary, A, Simon, N.L, DeMarsh, P.L, Mushtaq, S, Warner, M, Livermore, D.M, Alley, M.R.K, Plattner, J.J. 登録日 2013-01-18 公開日 2013-04-17 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.31 Å) 主引用文献 Discovery of a Novel Class of Boron-Based Antibacterials with Activity Against Gram-Negative Bacteria. Antimicrob.Agents Chemother., 57, 2013
4CDU	Crystal structure of human Enterovirus 71 in complex with the uncoating inhibitor GPP3 分子名称: 1-[(3S)-5-[4-[(E)-ETHOXYIMINOMETHYL]PHENOXY]-3-METHYL-PENTYL]-3-PYRIDIN-4-YL-IMIDAZOLIDIN-2-ONE, CHLORIDE ION, SODIUM ION, ... 著者 De Colibus, L, Wang, X, Spyrou, J.A.B, Kelly, J, Ren, J, Grimes, J, Puerstinger, G, Stonehouse, N, Walter, T.S, Hu, Z, Wang, J, Li, X, Peng, W, Rowlands, D, Fry, E.E, Rao, Z, Stuart, D.I. 登録日 2013-11-06 公開日 2014-02-12 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 More-Powerful Virus Inhibitors from Structure-Based Analysis of Hev71 Capsid-Binding Molecules Nat.Struct.Mol.Biol., 21, 2014
2WKX	Crystal structure of the native E. coli zinc amidase AmiD 分子名称: CHLORIDE ION, GLYCEROL, N-ACETYLMURAMOYL-L-ALANINE AMIDASE AMID, ... 著者 Petrella, S, Kerff, F, Herman, R, Genereux, C, Pennartz, A, Sauvage, E, Joris, B, Charlier, P. 登録日 2009-06-18 公開日 2010-01-12 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Specific Structural Features of the N-Acetylmuramoyl-L-Alanine Amidase Amid from Escherichia Coli and Mechanistic Implications for Enzymes of This Family. J.Mol.Biol., 397, 2010
5B3A	Crystal Structure of O-Phoshoserine Sulfhydrylase from Aeropyrum pernix in Complexed with the alpha-Aminoacrylate Intermediate 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-{[(E)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene]amino}prop-2-enoic acid, Protein CysO 著者 Nakamura, T, Takeda, E, Kawai, Y, Kataoka, M, Ishikawa, K. 登録日 2016-02-12 公開日 2016-03-16 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.14 Å) 主引用文献 Role of F225 in O-phosphoserine sulfhydrylase from Aeropyrum pernix K1 Extremophiles, 20, 2016
7BAR	Crystal structure of the cAMP-dependent protein kinase A with a chiral ligand (S- and E-configuration, soaked) 分子名称: (S,E)-3-(2-(3-bromo-4-hydroxybenzylidene)hydrazineyl)-2-(3-chlorophenyl)-3-oxopropan-1-aminium, cAMP-dependent protein kinase catalytic subunit alpha 著者 Oebbeke, M, Heine, A, Klebe, G. 登録日 2020-12-16 公開日 2022-01-12 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.37 Å) 主引用文献 Crystal structure of the cAMP-dependent protein kinase A with a chiral ligand (S- and E-configuration, soaked) To Be Published

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