PDB: 97138 件ウェブページステータス検索Chemie searchBIRD

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4LSS	Crystal structure of broadly and potently neutralizing antibody VRC01 in complex with HIV-1 clade A strain KER_2018_11 gp120 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, HEAVY CHAIN OF ANTIBODY VRC01, ... 著者 Zhou, T, Moquin, S, Kwong, P.D. 登録日 2013-07-23 公開日 2013-08-21 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (2.59 Å) 主引用文献 Multidonor Analysis Reveals Structural Elements, Genetic Determinants, and Maturation Pathway for HIV-1 Neutralization by VRC01-Class Antibodies. Immunity, 39, 2013
4LUL	The crystal structure of the P132A, Y133D mutant of Pyrococcus furiosus phosphoglucose isomerase in complex with manganese. 分子名称: Glucose-6-phosphate isomerase, MANGANESE (II) ION 著者 Baker, P.J, Almourfi, F.M. 登録日 2013-07-25 公開日 2014-07-30 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.89 Å) 主引用文献 Correlated mutation analysis as a tool for smart library design to improve protein performance. To be Published
4LUK	The crystal structure of the P132A, Y133G mutant of Pyrococcus furiosus phosphoglucose isomerase in complex with manganese and 5-phospho-D-arabinonate. 分子名称: 1,2-ETHANEDIOL, 5-PHOSPHOARABINONIC ACID, Glucose-6-phosphate isomerase, ... 著者 Baker, P.J, Almourfi, F.M. 登録日 2013-07-25 公開日 2014-07-30 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.41 Å) 主引用文献 Correlated mutation analysis as a tool for smart library design to improve protein performance. To be Published
4M18	Crystal Structure of Surfactant Protein-D D325A/R343V mutant in complex with trimannose (Man-a1,2Man-a1,2Man) 分子名称: CALCIUM ION, Pulmonary surfactant-associated protein D, alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose, ... 著者 Goh, B.C, Rynkiewicz, M.J, Cafarella, T.R, White, M.R, Hartshorn, K.L, Allen, K, Crouch, E.C, Calin, O, Seeberger, P.H, Schulten, K, Seaton, B.A. 登録日 2013-08-02 公開日 2013-12-04 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (3.203 Å) 主引用文献 Molecular mechanisms of inhibition of influenza by surfactant protein d revealed by large-scale molecular dynamics simulation. Biochemistry, 52, 2013
4M20	Crystal Structure of hypothetical protein SAV0944 from Staphylococcus aureus subsp. aureus Mu50 分子名称: COENZYME A, Uncharacterized protein 著者 Khandokar, Y.B, Forwood, J.K. 登録日 2013-08-05 公開日 2014-02-12 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Expression, purification, crystallization and preliminary X-ray analysis of the PaaI-like thioesterase SAV0944 from Staphylococcus aureus. Acta Crystallogr F Struct Biol Commun, 70, 2014
4LSP	Crystal structure of broadly and potently neutralizing antibody VRC-CH31 in complex with HIV-1 clade A/E gp120 93TH057 分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, DI(HYDROXYETHYL)ETHER, ... 著者 Zhou, T, Moquin, S, Kwong, P.D. 登録日 2013-07-23 公開日 2013-09-04 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Multidonor Analysis Reveals Structural Elements, Genetic Determinants, and Maturation Pathway for HIV-1 Neutralization by VRC01-Class Antibodies. Immunity, 39, 2013
3IX0	Crystal structure of human seminal plasma protein PSP94 分子名称: Beta-microseminoprotein 著者 Kumar, M, Kumar, A, Jagtap, D.D, Mahale, S.D. 登録日 2009-09-03 公開日 2010-03-16 最終更新日 2014-02-05 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Crystal structure of prostate secretory protein PSP94 shows an edge-to-edge association of two monomers to form a homodimer J.Mol.Biol., 397, 2010
4MBG	Crystal structure of Aspergillus fumigatus protein farnesyltransferase binary complex with farnesyldiphosphate 分子名称: 1,2-ETHANEDIOL, CaaX farnesyltransferase alpha subunit Ram2, CaaX farnesyltransferase beta subunit Ram1, ... 著者 Mabanglo, M.F, Hast, M.A, Beese, L.S. 登録日 2013-08-19 公開日 2014-01-01 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.74 Å) 主引用文献 Crystal structures of the fungal pathogen Aspergillus fumigatus protein farnesyltransferase complexed with substrates and inhibitors reveal features for antifungal drug design. Protein Sci., 23, 2014
4LSR	Crystal structure of broadly and potently neutralizing antibody VRC-CH31 in complex with HIV-1 clade A/E stran 93TH057 gp120 with LOOP D and Loop V5 from clade A strain KER_2018_11 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ENVELOPE GLYCOPROTEIN GP120 WITH LOOP D AND V5 FROM STRAIN ker_2018_11, HEAVY CHAIN OF ANTIBODY VRC-CH31, ... 著者 Zhou, T, Moquin, S, Kwong, P.D. 登録日 2013-07-23 公開日 2013-08-21 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (2.28 Å) 主引用文献 Multidonor Analysis Reveals Structural Elements, Genetic Determinants, and Maturation Pathway for HIV-1 Neutralization by VRC01-Class Antibodies. Immunity, 39, 2013
4LSQ	Crystal structure of broadly and potently neutralizing antibody VRC-CH31 in complex with HIV-1 clade A/E gp120 93TH057 with LOOP D and Loop V5 from clade A strain 3415_v1_c1 分子名称: (R,R)-2,3-BUTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, CADMIUM ION, ... 著者 Zhou, T, Moquin, S, Kwong, P.D. 登録日 2013-07-23 公開日 2013-08-21 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Multidonor Analysis Reveals Structural Elements, Genetic Determinants, and Maturation Pathway for HIV-1 Neutralization by VRC01-Class Antibodies. Immunity, 39, 2013
4M5P	OYE2.6 Y78W, I113C 分子名称: FLAVIN MONONUCLEOTIDE, MALONIC ACID, NADPH dehydrogenase, ... 著者 Sullivan, B, Stewart, J.D. 登録日 2013-08-08 公開日 2014-06-25 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.503 Å) 主引用文献 Residues Controlling Facial Selectivity in an Alkene Reductase and Semirational Alterations to Create Stereocomplementary Variants. ACS catalysis, 4, 2014
2GOV	Solution structure of Murine p22HBP 分子名称: Heme-binding protein 1 著者 Volkman, B.F, Dias, J.S, Goodfellow, B.J, Peterson, F.C, Center for Eukaryotic Structural Genomics (CESG) 登録日 2006-04-14 公開日 2006-05-09 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 The First Structure from the SOUL/HBP Family of Heme-binding Proteins, Murine P22HBP. J.Biol.Chem., 281, 2006
4M17	Crystal Structure of Surfactant Protein-D D325A/R343V mutant 分子名称: CALCIUM ION, Pulmonary surfactant-associated protein D 著者 Goh, B.C, Rynkiewicz, M.J, Cafarella, T.R, White, M.R, Hartshorn, K.L, Allen, K, Crouch, E.C, Calin, O, Seeberger, P.H, Schulten, K, Seaton, B.A. 登録日 2013-08-02 公開日 2013-12-04 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.096 Å) 主引用文献 Molecular mechanisms of inhibition of influenza by surfactant protein d revealed by large-scale molecular dynamics simulation. Biochemistry, 52, 2013
3I92	Structure of the cytosolic domain of E. coli FeoB, GppCH2p-bound form 分子名称: Ferrous iron transport protein B, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER 著者 Petermann, N, Hansen, G, Hogg, T, Hilgenfeld, R. 登録日 2009-07-10 公開日 2009-07-28 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Structural basis for the intrinsic GTPase and GDI activities of FeoB, a prokaryotic transmembrane GTP/GDP-binding protein To be Published
1G7Y	THE CRYSTAL STRUCTURE OF THE 58KD VEGETATIVE LECTIN FROM THE TROPICAL LEGUME DOLICHOS BIFLORUS 分子名称: CALCIUM ION, MANGANESE (II) ION, STEM/LEAF LECTIN DB58, ... 著者 Buts, L, Hamelryck, T.W, Loris, R, Dao-Thi, M.-H, Wyns, L, Etzler, M.E. 登録日 2000-11-15 公開日 2000-11-29 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Weak protein-protein interactions in lectins: the crystal structure of a vegetative lectin from the legume Dolichos biflorus. J.Mol.Biol., 309, 2001
1ZJA	Crystal structure of the trehalulose synthase MutB from Pseudomonas mesoacidophila MX-45 (triclinic form) 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, Trehalulose synthase 著者 Ravaud, S, Robert, X, Haser, R, Aghajari, N. 登録日 2005-04-28 公開日 2006-10-17 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Trehalulose synthase native and carbohydrate complexed structures provide insights into sucrose isomerization. J.Biol.Chem., 282, 2007
1GNC	STRUCTURE AND DYNAMICS OF THE HUMAN GRANULOCYTE COLONY-STIMULATING FACTOR DETERMINED BY NMR SPECTROSCOPY. LOOP MOBILITY IN A FOUR-HELIX-BUNDLE PROTEIN 分子名称: GRANULOCYTE COLONY-STIMULATING FACTOR 著者 Zink, T.W, Ross, A, Rudolph, R, Holak, T.A. 登録日 1994-03-08 公開日 1994-07-31 最終更新日 2017-11-29 実験手法 SOLUTION NMR 主引用文献 Structure and dynamics of the human granulocyte colony-stimulating factor determined by NMR spectroscopy. Loop mobility in a four-helix-bundle protein. Biochemistry, 33, 1994
6C7H	Directed evolutionary changes in Kemp Eliminase KE07 - Crystal 18 Design Trp50Ala mutant 分子名称: Kemp eliminase KE07 著者 Jackson, C.J, Hong, N.-S, Carr, P.D. 登録日 2018-01-22 公開日 2018-08-01 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.43 Å) 主引用文献 The evolution of multiple active site configurations in a designed enzyme. Nat Commun, 9, 2018
6C7M	Directed evolutionary changes in Kemp Eliminase KE07 - Crystal 19 round 5 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Kemp Eliminase KE07 著者 Jackson, C.J, Hong, N.-S, Carr, P.D. 登録日 2018-01-22 公開日 2018-08-01 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 The evolution of multiple active site configurations in a designed enzyme. Nat Commun, 9, 2018
6C7V	Directed evolutionary changes in Kemp Eliminase KE07 - Crystal 22 round 5 分子名称: Kemp eliminase KE07 著者 Jackson, C.J, Hong, N.-S, Carr, P.D. 登録日 2018-01-23 公開日 2018-08-01 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.64 Å) 主引用文献 The evolution of multiple active site configurations in a designed enzyme. Nat Commun, 9, 2018
1CIF	STRUCTURAL AND FUNCTIONAL EFFECTS OF MULTIPLE MUTATIONS AT DISTAL SITES IN CYTOCHROME C 分子名称: CYTOCHROME C, HEME C, SULFATE ION 著者 Lo, T.P, Brayer, G.D. 登録日 1994-09-26 公開日 1995-01-26 最終更新日 2021-03-03 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structural and functional effects of multiple mutations at distal sites in cytochrome c. Biochemistry, 34, 1995
1CIW	PEANUT LECTIN COMPLEXED WITH N-ACETYLLACTOSAMINE 分子名称: CALCIUM ION, MANGANESE (II) ION, PROTEIN (PEANUT LECTIN), ... 著者 Ravishankar, R, Suguna, K, Surolia, A, Vijayan, M. 登録日 1999-04-06 公開日 1999-07-27 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Structures of the complexes of peanut lectin with methyl-beta-galactose and N-acetyllactosamine and a comparative study of carbohydrate binding in Gal/GalNAc-specific legume lectins. Acta Crystallogr.,Sect.D, 55, 1999
1CIG	STRUCTURAL AND FUNCTIONAL EFFECTS OF MULTIPLE MUTATIONS AT DISTAL SITES IN CYTOCHROME C 分子名称: CYTOCHROME C, HEME C, SULFATE ION 著者 Lo, T.P, Brayer, G.D. 登録日 1994-09-26 公開日 1995-01-26 最終更新日 2021-03-03 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structural and functional effects of multiple mutations at distal sites in cytochrome c. Biochemistry, 34, 1995
5PRC	PHOTOSYNTHETIC REACTION CENTER FROM RHODOPSEUDOMONAS VIRIDIS (ATRAZINE COMPLEX) 分子名称: 15-cis-1,2-dihydroneurosporene, 2-CHLORO-4-ISOPROPYLAMINO-6-ETHYLAMINO -1,3,5-TRIAZINE, BACTERIOCHLOROPHYLL B, ... 著者 Lancaster, C.R.D, Michel, H. 登録日 1997-08-01 公開日 1999-04-06 最終更新日 2023-08-09 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 Refined crystal structures of reaction centres from Rhodopseudomonas viridis in complexes with the herbicide atrazine and two chiral atrazine derivatives also lead to a new model of the bound carotenoid. J.Mol.Biol., 286, 1999
1CIE	STRUCTURAL AND FUNCTIONAL EFFECTS OF MULTIPLE MUTATIONS AT DISTAL SITES IN CYTOCHROME C 分子名称: CYTOCHROME C, HEME C, SULFATE ION 著者 Lo, T.P, Brayer, G.D. 登録日 1994-09-26 公開日 1995-01-26 最終更新日 2021-03-03 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structural and functional effects of multiple mutations at distal sites in cytochrome c. Biochemistry, 34, 1995

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