PDB: 45953 件ウェブページステータス検索Chemie searchBIRD

---

2ODW	MSrecA-ATP-GAMA-S complex 分子名称: PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, Protein recA 著者 Krishna, R, Rajan Prabu, J, Manjunath, G.P, Datta, S, Chandra, N.R, Muniyappa, K, Vijayan, M. 登録日 2006-12-27 公開日 2007-06-19 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (3.3 Å) 主引用文献 Snapshots of RecA protein involving movement of the C-domain and different conformations of the DNA-binding loops: crystallographic and comparative analysis of 11 structures of Mycobacterium smegmatis RecA J.Mol.Biol., 367, 2007
6FQP	Crystal structure of TALE homeobox domain transcription factor TGIF1 with its consensus DNA 分子名称: CALCIUM ION, DNA (5'-D(P*AP*TP*TP*GP*AP*CP*AP*GP*CP*TP*GP*TP*CP*AP*AP*T)-3'), Homeobox protein TGIF1 著者 Guca, E, Macias, M.J. 登録日 2018-02-14 公開日 2018-07-25 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.42 Å) 主引用文献 TGIF1 homeodomain interacts with Smad MH1 domain and represses TGF-beta signaling. Nucleic Acids Res., 46, 2018
6FQQ	Crystal structure of TALE homeobox domain transcription factor TGIF1 double alanine mutant bound to its consensus DNA 分子名称: CHLORIDE ION, DNA (5'-D(P*AP*TP*TP*GP*AP*CP*AP*GP*CP*TP*GP*TP*CP*AP*AP*T)-3'), Homeobox protein TGIF1 著者 Guca, E, Macias, M.J. 登録日 2018-02-14 公開日 2018-07-25 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (3.25000262 Å) 主引用文献 TGIF1 homeodomain interacts with Smad MH1 domain and represses TGF-beta signaling. Nucleic Acids Res., 46, 2018
7QXA	Cryo-EM map of human telomerase-DNA-TPP1 complex (sharpened) 分子名称: Adrenocortical dysplasia homolog (Mouse), isoform CRA_a, Histone H2A, ... 著者 Sekne, Z, Ghanim, G.E, van Roon, A.M.M, Nguyen, T.H.D. 登録日 2022-01-26 公開日 2022-03-02 最終更新日 2024-07-17 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Structural basis of human telomerase recruitment by TPP1-POT1. Science, 375, 2022
2OFO	MSrecA-native 分子名称: PHOSPHATE ION, Protein recA 著者 Krishna, R, Rajan Prabu, J, Manjunath, G.P, Datta, S, Chandra, N.R, Muniyappa, K, Vijayan, M. 登録日 2007-01-04 公開日 2007-06-19 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (3.16 Å) 主引用文献 Snapshots of RecA protein involving movement of the C-domain and different conformations of the DNA-binding loops: crystallographic and comparative analysis of 11 structures of Mycobacterium smegmatis RecA J.Mol.Biol., 367, 2007
5OQN	Crystal structure of the S. cerevisiae condensin Ycg1-Brn1 subcomplex bound to DNA (short kleisin loop) 分子名称: Condensin complex subunit 2, Condensin complex subunit 3, DNA (5'-D(*GP*AP*TP*GP*TP*GP*TP*AP*GP*CP*TP*AP*CP*AP*CP*AP*TP*C)-3') 著者 Kschonsak, M, Hassler, M, Haering, C.H. 登録日 2017-08-14 公開日 2017-10-18 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (3.15 Å) 主引用文献 Structural Basis for a Safety-Belt Mechanism That Anchors Condensin to Chromosomes. Cell, 171, 2017
5H9E	Crystal structure of E. coli Cascade bound to a PAM-containing dsDNA target (32-nt spacer) at 3.20 angstrom resolution. 分子名称: CRISPR system Cascade subunit CasA, CRISPR system Cascade subunit CasB, CRISPR system Cascade subunit CasC, ... 著者 Hayes, R.P, Xiao, Y, Ding, F, van Erp, P.B.G, Rajashankar, K, Bailey, S, Wiedenheft, B, Ke, A. 登録日 2015-12-28 公開日 2016-02-17 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (3.21 Å) 主引用文献 Structural basis for promiscuous PAM recognition in type I-E Cascade from E. coli. Nature, 530, 2016
1EE8	CRYSTAL STRUCTURE OF MUTM (FPG) PROTEIN FROM THERMUS THERMOPHILUS HB8 分子名称: MUTM (FPG) PROTEIN, ZINC ION 著者 Sugahara, M, Mikawa, T, Kumasaka, T, Yamamoto, M, Kato, R, Fukuyama, K, Inoue, Y, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2000-01-31 公開日 2001-01-31 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Crystal structure of a repair enzyme of oxidatively damaged DNA, MutM (Fpg), from an extreme thermophile, Thermus thermophilus HB8. EMBO J., 19, 2000
2P5K	Crystal structure of the N-terminal domain of AhrC 分子名称: Arginine repressor 著者 Garnett, J.A, Baumberg, S, Stockley, P.G, Phillips, S.E.V. 登録日 2007-03-15 公開日 2007-10-30 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1 Å) 主引用文献 A high-resolution structure of the DNA-binding domain of AhrC, the arginine repressor/activator protein from Bacillus subtilis. Acta Crystallogr.,Sect.F, 63, 2007
6GO6	TdT chimera (Loop1 of pol mu) - ternary complex with downstream dsDNA 分子名称: 2',3'-DIDEOXYCYTIDINE 5'-TRIPHOSPHATE, DNA (5'-D(*AP*AP*AP*AP*AP*C)-3'), DNA (5'-D(*TP*TP*TP*TP*TP*GP*GP*C)-3'), ... 著者 Loc'h, J, Gerodimos, C.A, Rosario, S, Lieber, M.R, Delarue, M. 登録日 2018-06-01 公開日 2019-06-05 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.09 Å) 主引用文献 Structural evidence for an intransbase selection mechanism involving Loop1 in polymerase mu at an NHEJ double-strand break junction. J.Biol.Chem., 294, 2019
3NHG	RB69 DNA Polymerase (S565G/Y567A) Ternary Complex with dTTP Opposite dG 分子名称: CALCIUM ION, DNA (5'-D(*GP*CP*GP*GP*AP*CP*TP*GP*CP*TP*TP*AP*(DOC))-3'), DNA (5'-D(*TP*CP*AP*GP*GP*TP*AP*AP*GP*CP*AP*GP*TP*CP*CP*GP*CP*G)-3'), ... 著者 Wang, M, Wang, J, Konigsberg, W.H. 登録日 2010-06-14 公開日 2011-01-26 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Variation in Mutation Rates Caused by RB69pol Fidelity Mutants Can Be Rationalized on the Basis of Their Kinetic Behavior and Crystal Structures. J.Mol.Biol., 406, 2011
5H9F	Crystal structure of E. coli Cascade bound to a PAM-containing dsDNA target at 2.45 angstrom resolution. 分子名称: CRISPR system Cascade subunit CasA, CRISPR system Cascade subunit CasB, CRISPR system Cascade subunit CasC, ... 著者 Hayes, R.P, Xiao, Y, Ding, F, van Erp, P.B.G, Rajashankar, K, Bailey, S, Wiedenheft, B, Ke, A. 登録日 2015-12-28 公開日 2016-02-17 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.45 Å) 主引用文献 Structural basis for promiscuous PAM recognition in type I-E Cascade from E. coli. Nature, 530, 2016
3PHT	Crystal structure of H74A mutant of Helicobacter Pylori NikR 分子名称: NICKEL (II) ION, Putative nickel-responsive regulator 著者 Pozharski, E, Evans, S, Michel, S. 登録日 2010-11-04 公開日 2011-11-23 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.04 Å) 主引用文献 Ni(II) coordination to mixed sites modulates DNA binding of HpNikR via a long-range effect. Proc.Natl.Acad.Sci.USA, 109, 2012
5OQP	Crystal structure of the S. cerevisiae condensin Ycg1-Brn1 subcomplex bound to DNA (crystal form I) 分子名称: Condensin complex subunit 2, Condensin complex subunit 3, DNA (5'-D(*GP*AP*TP*GP*TP*GP*TP*AP*GP*CP*TP*AP*CP*AP*CP*AP*TP*C)-3'), ... 著者 Kschonsak, M, Hassler, M, Haering, C.H. 登録日 2017-08-14 公開日 2017-10-18 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.98 Å) 主引用文献 Structural Basis for a Safety-Belt Mechanism That Anchors Condensin to Chromosomes. Cell, 171, 2017
5M3E	Macrodomain of Thermus aquaticus DarG in complex with ADP-ribose 分子名称: ADENOSINE-5-DIPHOSPHORIBOSE, Appr-1-p processing domain protein, CHLORIDE ION 著者 Ariza, A. 登録日 2016-10-14 公開日 2016-12-21 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 The Toxin-Antitoxin System DarTG Catalyzes Reversible ADP-Ribosylation of DNA. Mol. Cell, 64, 2016
5M3I	Macrodomain of Mycobacterium tuberculosis DarG 分子名称: CHLORIDE ION, RNase III inhibitor 著者 Ariza, A. 登録日 2016-10-14 公開日 2016-12-21 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.17 Å) 主引用文献 The Toxin-Antitoxin System DarTG Catalyzes Reversible ADP-Ribosylation of DNA. Mol. Cell, 64, 2016
5M31	Macrodomain of Thermus aquaticus DarG 分子名称: Appr-1-p processing domain protein, CHLORIDE ION, GLYCEROL 著者 Ariza, A. 登録日 2016-10-13 公開日 2016-12-21 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.67 Å) 主引用文献 The Toxin-Antitoxin System DarTG Catalyzes Reversible ADP-Ribosylation of DNA. Mol. Cell, 64, 2016
7TMX	Structure of Mouse Importin alpha NEIL1 NLS Peptide Complex 分子名称: Importin subunit alpha-1, Nuclear Localization Signal from Endonuclease 8-like 1 著者 Moraes, I.R, de Oliveira, H.C, Fontes, M.R.M. 登録日 2022-01-20 公開日 2023-08-02 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural basis of nuclear transport for NEIL DNA glycosylases mediated by importin-alpha. Biochim Biophys Acta Proteins Proteom, 1872, 2023
2OES	MSrecA-native-SSB 分子名称: PHOSPHATE ION, Protein recA 著者 Krishna, R, Rajan Prabu, J, Manjunath, G.P, Datta, S, Chandra, N.R, Muniyappa, K, Vijayan, M. 登録日 2007-01-01 公開日 2007-06-19 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 Snapshots of RecA protein involving movement of the C-domain and different conformations of the DNA-binding loops: crystallographic and comparative analysis of 11 structures of Mycobacterium smegmatis RecA J.Mol.Biol., 367, 2007
2OEP	MSrecA-ADP-complex 分子名称: ADENOSINE-5'-DIPHOSPHATE, Protein recA 著者 Krishna, R, Rajan Prabu, J, Manjunath, G.P, Datta, S, Chandra, N.R, Muniyappa, K, Vijayan, M. 登録日 2006-12-31 公開日 2007-06-19 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Snapshots of RecA protein involving movement of the C-domain and different conformations of the DNA-binding loops: crystallographic and comparative analysis of 11 structures of Mycobacterium smegmatis RecA J.Mol.Biol., 367, 2007
1D1L	CRYSTAL STRUCTURE OF CRO-F58W MUTANT 分子名称: LAMBDA CRO REPRESSOR, SULFATE ION 著者 Rupert, P.B, Mollah, A.K, Mossing, M.C, Matthews, B.W. 登録日 1999-09-17 公開日 1999-10-06 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 The structural basis for enhanced stability and reduced DNA binding seen in engineered second-generation Cro monomers and dimers. J.Mol.Biol., 296, 2000
7JGS	Structure of Drosophila ORC bound to poly(dA/dT) DNA and Cdc6 (conformation 2) 分子名称: ADENOSINE-5'-TRIPHOSPHATE, AT22044p1, Cell division control protein, ... 著者 Schmidt, J.M, Bleichert, F. 登録日 2020-07-19 公開日 2020-09-09 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Structural mechanism for replication origin binding and remodeling by a metazoan origin recognition complex and its co-loader Cdc6. Nat Commun, 11, 2020
7JGR	Structure of Drosophila ORC bound to DNA (84 bp) and Cdc6 分子名称: ADENOSINE-5'-TRIPHOSPHATE, AT22044p1, Cell division control protein, ... 著者 Schmidt, J.M, Bleichert, F. 登録日 2020-07-19 公開日 2020-09-09 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 Structural mechanism for replication origin binding and remodeling by a metazoan origin recognition complex and its co-loader Cdc6. Nat Commun, 11, 2020
4G0W	Human topoisomerase iibeta in complex with DNA and ametantrone 分子名称: 1,4-bis({2-[(2-hydroxyethyl)amino]ethyl}amino)anthracene-9,10-dione, DNA (5'-D(P*AP*GP*CP*CP*GP*AP*GP*C)-3'), DNA (5'-D(P*TP*GP*CP*AP*GP*CP*TP*CP*GP*GP*CP*T)-3'), ... 著者 Wu, C.C, Li, T.K, Li, Y.C, Chan, N.L. 登録日 2012-07-10 公開日 2013-07-17 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.696 Å) 主引用文献 On the structural basis and design guidelines for type II topoisomerase-targeting anticancer drugs Nucleic Acids Res., 41, 2013
7S6H	Human PARP1 deltaV687-E688 bound to NAD+ analog EB-47 and to a DNA double strand break. 分子名称: 1,2-ETHANEDIOL, 2-[4-[(2S,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]carbonylpiperazin-1-yl]-N-(1-oxidanylidene-2,3-dihydroisoindol-4-yl)ethanamide, DNA (5'-D(*CP*GP*AP*CP*G)-3'), ... 著者 Rouleau-Turcotte, E, Pascal, J.M. 登録日 2021-09-14 公開日 2022-06-29 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Captured snapshots of PARP1 in the active state reveal the mechanics of PARP1 allostery. Mol.Cell, 82, 2022

<400401402403404405406407408409410411412413414415>