PDB: 42250 件ウェブページステータス検索Chemie searchBIRD

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6UU9	E. coli mutant sigma-S transcription initiation complex with an 8-nt RNA ("Fresh" mutant crystal soaked with GTP, UTP, CTP, and ddATP for 30 minutes) 分子名称: 2',3'-DIDEOXYADENOSINE-5'-MONOPHOSPHATE, DIPHOSPHATE, DNA-directed RNA polymerase subunit alpha, ... 著者 Zuo, Y, De, S, Steitz, T.A. 登録日 2019-10-30 公開日 2020-08-26 最終更新日 2024-10-23 実験手法 X-RAY DIFFRACTION (5.4 Å) 主引用文献 Structural Insights into Transcription Initiation from De Novo RNA Synthesis to Transitioning into Elongation. Iscience, 23, 2020
8EHI	Cryo-EM structure of his-elemental paused elongation complex with an unfolded TL (2) 分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ... 著者 Kang, J.Y, Chen, J, Llewellyn, E, Landick, R, Darst, S.A. 登録日 2022-09-14 公開日 2023-03-01 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (5.5 Å) 主引用文献 An ensemble of interconverting conformations of the elemental paused transcription complex creates regulatory options. Proc.Natl.Acad.Sci.USA, 120, 2023
6UU4	E. coli sigma-S transcription initiation complex with a 3-nt RNA ("old" crystal soaked with GTP and dinucleotide GpA for 30 minutes) 分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ... 著者 Zuo, Y, De, S, Steitz, T.A. 登録日 2019-10-30 公開日 2020-08-26 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (4.305 Å) 主引用文献 Structural Insights into Transcription Initiation from De Novo RNA Synthesis to Transitioning into Elongation. Iscience, 23, 2020
8EHF	Cryo-EM structure of his-elemental paused elongation complex with an unfolded TL (1) 分子名称: (3R,5S,7R,8R,9S,10S,12S,13R,14S,17R)-10,13-dimethyl-17-[(2R)-pentan-2-yl]-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1H-cyclopenta[a]phenanthrene-3,7,12-triol, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... 著者 Kang, J.Y, Chen, J, Llewellyn, E, Landick, R, Darst, S.A. 登録日 2022-09-14 公開日 2023-03-01 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 An ensemble of interconverting conformations of the elemental paused transcription complex creates regulatory options. Proc.Natl.Acad.Sci.USA, 120, 2023
1AKE	STRUCTURE OF THE COMPLEX BETWEEN ADENYLATE KINASE FROM ESCHERICHIA COLI AND THE INHIBITOR AP5A REFINED AT 1.9 ANGSTROMS RESOLUTION: A MODEL FOR A CATALYTIC TRANSITION STATE 分子名称: ADENYLATE KINASE, BIS(ADENOSINE)-5'-PENTAPHOSPHATE 著者 Mueller, C.W, Schulz, G.E. 登録日 1991-11-08 公開日 1994-01-31 最終更新日 2024-12-25 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structure of the complex between adenylate kinase from Escherichia coli and the inhibitor Ap5A refined at 1.9 A resolution. A model for a catalytic transition state. J.Mol.Biol., 224, 1992
8EG8	Cryo-EM structure of consensus elemental paused elongation complex with a folded TL 分子名称: CHAPSO, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... 著者 Kang, J.Y, Chen, J, Llewellyn, E, Landick, R, Darst, S.A. 登録日 2022-09-12 公開日 2023-03-01 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 An ensemble of interconverting conformations of the elemental paused transcription complex creates regulatory options. Proc.Natl.Acad.Sci.USA, 120, 2023
2XJK	Monomeric Human Cu,Zn Superoxide dismutase 分子名称: COPPER (II) ION, SUPEROXIDE DISMUTASE [CU-ZN], ZINC ION 著者 Saraboji, K, Leinartaite, L, Nordlund, A, Oliveberg, M, Logan, D.T. 登録日 2010-07-07 公開日 2010-09-01 最終更新日 2024-11-06 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Folding Catalysis by Transient Coordination of Zn2+ to the Cu Ligands of the Als-Associated Enzyme Cu/Zn Superoxide Dismutase 1. J.Am.Chem.Soc., 132, 2010
8EHA	Cryo-EM structure of his-elemental paused elongation complex with a folded TL and a rotated RH-FL (out) 分子名称: CHAPSO, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... 著者 Kang, J.Y, Chen, J, Llewellyn, E, Landick, R, Darst, S.A. 登録日 2022-09-14 公開日 2023-03-01 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (3.7 Å) 主引用文献 An ensemble of interconverting conformations of the elemental paused transcription complex creates regulatory options. Proc.Natl.Acad.Sci.USA, 120, 2023
8EGB	Cryo-EM structure of consensus elemental paused elongation complex with an unfolded TL 分子名称: CHAPSO, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... 著者 Kang, J.Y, Chen, J, Llewellyn, E, Landick, R, Darst, S.A. 登録日 2022-09-12 公開日 2023-03-01 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 An ensemble of interconverting conformations of the elemental paused transcription complex creates regulatory options. Proc.Natl.Acad.Sci.USA, 120, 2023
8EG7	Cryo-EM structure of pre-consensus elemental paused elongation complex 分子名称: CHAPSO, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... 著者 Kang, J.Y, Chen, J, Llewellyn, E, Landick, R, Darst, S.A. 登録日 2022-09-11 公開日 2023-03-01 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 An ensemble of interconverting conformations of the elemental paused transcription complex creates regulatory options. Proc.Natl.Acad.Sci.USA, 120, 2023
8EH8	Cryo-EM structure of his-elemental paused elongation complex with a folded TL and a rotated RH-FL (1) 分子名称: CHAPSO, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... 著者 Kang, J.Y, Chen, J, Llewellyn, E, Landick, R, Darst, S.A. 登録日 2022-09-13 公開日 2023-03-01 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 An ensemble of interconverting conformations of the elemental paused transcription complex creates regulatory options. Proc.Natl.Acad.Sci.USA, 120, 2023
8EH9	Cryo-EM structure of his-elemental paused elongation complex with a folded TL and a rotated RH-FL (2) 分子名称: CHAPSO, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... 著者 Kang, J.Y, Chen, J, Llewellyn, E, Landick, R, Darst, S.A. 登録日 2022-09-13 公開日 2023-03-01 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 An ensemble of interconverting conformations of the elemental paused transcription complex creates regulatory options. Proc.Natl.Acad.Sci.USA, 120, 2023
1YPF	Crystal Structure of GuaC (BA5705) from Bacillus anthracis at 1.8 A Resolution 分子名称: GMP reductase 著者 Grenha, R, Levdikov, V.M, Blagova, E.V, Fogg, M.J, Brannigan, J.A, Wilkinson, A.J, Wilson, K.S, Structural Proteomics in Europe (SPINE) 登録日 2005-01-31 公開日 2006-02-14 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Crystal Structure of GuaC (BA5705) from Bacillus anthracis at 1.8 A Resolution. To be Published
6UTW	E. coli sigma-S transcription initiation complex with a 4-nt RNA ("Fresh" crystal) 分子名称: DIPHOSPHATE, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... 著者 Zuo, Y, De, S, Steitz, T.A. 登録日 2019-10-30 公開日 2020-08-26 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (3.854 Å) 主引用文献 Structural Insights into Transcription Initiation from De Novo RNA Synthesis to Transitioning into Elongation. Iscience, 23, 2020
6UUC	E. coli sigma-S transcription initiation complex with a 3-nt RNA and a mismatching ATP ("Fresh" crystal soaked with ATP for 2 hours) 分子名称: ADENOSINE-5'-TRIPHOSPHATE, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... 著者 Zuo, Y, De, S, Steitz, T.A. 登録日 2019-10-30 公開日 2020-08-26 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (4.096 Å) 主引用文献 Structural Insights into Transcription Initiation from De Novo RNA Synthesis to Transitioning into Elongation. Iscience, 23, 2020
6UU7	E. coli sigma-S transcription initiation complex with a 6-nt RNA and an NTP ("Old" crystal soaked with UTP, CTP, ddGTP, and dinucleotide ApG for 30 minutes) 分子名称: 2'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... 著者 Zuo, Y, De, S, Steitz, T.A. 登録日 2019-10-30 公開日 2020-08-26 最終更新日 2024-11-06 実験手法 X-RAY DIFFRACTION (4.4 Å) 主引用文献 Structural Insights into Transcription Initiation from De Novo RNA Synthesis to Transitioning into Elongation. Iscience, 23, 2020
6XA1	Structure of a drug-like compound stalled human translation termination complex 分子名称: 18S rRNA, 28S rRNA, 40S ribosomal protein S10, ... 著者 Li, W, Cate, J. 登録日 2020-06-03 公開日 2020-10-07 最終更新日 2024-12-25 実験手法 ELECTRON MICROSCOPY (2.8 Å) 主引用文献 Selective inhibition of human translation termination by a drug-like compound. Nat Commun, 11, 2020
8QO1	Asymmetric structure of the Borrelia bacteriophage BB1 procapsid, 3D class 3 分子名称: Cytosolic protein, DUF228 domain-containing protein, Decoration protein P03, ... 著者 Rumnieks, J, Fuzik, T, Tars, K. 登録日 2023-10-11 公開日 2023-12-27 実験手法 ELECTRON MICROSCOPY (9.76 Å) 主引用文献 Structure of the Borrelia Bacteriophage phi BB1 Procapsid. J.Mol.Biol., 435, 2023
3PKJ	Human SIRT6 crystal structure in complex with 2'-N-Acetyl ADP ribose 分子名称: NAD-dependent deacetylase sirtuin-6, SULFATE ION, UNKNOWN ATOM OR ION, ... 著者 Pan, P.W, Dong, A, Qiu, W, Loppnau, P, Wang, J, Ravichandran, M, Walker, J.R, Bountra, C, Weigelt, J, Arrowsmith, C.H, Min, J, Edwards, A.M, Structural Genomics Consortium (SGC) 登録日 2010-11-11 公開日 2011-01-26 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.12 Å) 主引用文献 Structure and biochemical functions of SIRT6. J.Biol.Chem., 286, 2011
8QO0	Asymmetric structure of the Borrelia bacteriophage BB1 procapsid, 3D class 2 分子名称: Cytosolic protein, DUF228 domain-containing protein, Decoration protein P03, ... 著者 Rumnieks, J, Fuzik, T, Tars, K. 登録日 2023-09-27 公開日 2023-12-27 実験手法 ELECTRON MICROSCOPY (10.62 Å) 主引用文献 Structure of the Borrelia Bacteriophage phi BB1 Procapsid. J.Mol.Biol., 435, 2023
6UU5	E. coli sigma-S transcription initiation complex with a 6-nt RNA ("Old" crystal soaked with GTP, UTP, CTP, and dinucleotide GpA for 30 minutes) 分子名称: DIPHOSPHATE, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... 著者 Zuo, Y, De, S, Steitz, T.A. 登録日 2019-10-30 公開日 2020-08-26 最終更新日 2024-11-20 実験手法 X-RAY DIFFRACTION (5.403 Å) 主引用文献 Structural Insights into Transcription Initiation from De Novo RNA Synthesis to Transitioning into Elongation. Iscience, 23, 2020
6Y57	Structure of human ribosome in hybrid-PRE state 分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ... 著者 Bhaskar, V, Schenk, A.D, Cavadini, S, von Loeffelholz, O, Natchiar, S.K, Klaholz, B.P, Chao, J.A. 登録日 2020-02-25 公開日 2020-04-15 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Dynamics of uS19 C-Terminal Tail during the Translation Elongation Cycle in Human Ribosomes. Cell Rep, 31, 2020
4DN4	Crystal structure of the complex between cnto888 fab and mcp-1 mutant p8a 分子名称: ACETATE ION, C-C motif chemokine 2, CNTO888 HEAVY CHAIN, ... 著者 Obmolova, G, Teplyakov, A, Malia, T, Grygiel, T, Sweet, R, Snyder, L, Gilliland, G. 登録日 2012-02-08 公開日 2012-10-03 最終更新日 2024-11-06 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structural basis for high selectivity of anti-CCL2 neutralizing antibody CNTO 888. Mol.Immunol., 51, 2012
6VCN	Crystal structure of E.coli RppH in complex with ppcpG 分子名称: PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER, RNA pyrophosphohydrolase, SULFATE ION 著者 Gao, A, Vasilyev, N, Kaushik, A, Duan, W, Serganov, A. 登録日 2019-12-21 公開日 2020-02-05 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Principles of RNA and nucleotide discrimination by the RNA processing enzyme RppH. Nucleic Acids Res., 48, 2020
9DCH	Single-stranded RNA-mediated PRC2 dimer 分子名称: Isoform 2 of Histone-lysine N-methyltransferase EZH2, Polycomb protein EED, Polycomb protein SUZ12, ... 著者 Song, J.S, Kasinath, V.K. 登録日 2024-08-26 公開日 2025-03-12 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Diverse RNA Structures Induce PRC2 Dimerization and Inhibit Histone Methyltransferase Activity. Biorxiv, 2024

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