Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6UBS
DownloadVisualize
BU of 6ubs by Molmil
Full length Glycine receptor reconstituted in lipid nanodisc in Apo/Resting conformation
分子名称: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Glycine receptor subunit alphaZ1, ...
著者Kumar, A, Basak, S, Chakrapani, S.
登録日2019-09-12
公開日2020-07-29
最終更新日2020-08-12
実験手法ELECTRON MICROSCOPY (3.33 Å)
主引用文献Mechanisms of activation and desensitization of full-length glycine receptor in lipid nanodiscs.
Nat Commun, 11, 2020
6AN3
DownloadVisualize
BU of 6an3 by Molmil
Crystal structure of H172A-peptidylglycine alpha-hydroxylating monooxygenase (PHM) mutant soaked with peptide (no CuH bound, no peptide bound)
分子名称: COPPER (II) ION, DI(HYDROXYETHYL)ETHER, Peptidyl-glycine alpha-amidating monooxygenase
著者Maheshwari, S, Rudzka, K, Gabelli, S.B, Amzel, L.M.
登録日2017-08-11
公開日2018-07-18
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Effects of copper occupancy on the conformational landscape of peptidylglycine alpha-hydroxylating monooxygenase.
Commun Biol, 1, 2018
6B0U
DownloadVisualize
BU of 6b0u by Molmil
Crystal structure of acetyltransferase Eis from Mycobacterium tuberculosis in complex with a Lys-containing peptide
分子名称: COENZYME A, N-acetyltransferase Eis, Synthetic peptide ATKAPAKKA
著者Biswas, T, Pang, A.H, Garneau-Tsodikova, S, Tsodikov, O.V.
登録日2017-09-15
公開日2018-01-31
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Acetylation by Eis and Deacetylation by Rv1151c of Mycobacterium tuberculosis HupB: Biochemical and Structural Insight.
Biochemistry, 57, 2018
5FAC
DownloadVisualize
BU of 5fac by Molmil
Alanine Racemase from Streptomyces coelicolor A3(2)
分子名称: Alanine racemase, CHLORIDE ION, PYRIDOXAL-5'-PHOSPHATE
著者Tassoni, R, Pannu, N.S.
登録日2015-12-11
公開日2016-12-21
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural and functional characterization of the alanine racemase from Streptomyces coelicolor A3(2).
Biochem. Biophys. Res. Commun., 483, 2017
2IB0
DownloadVisualize
BU of 2ib0 by Molmil
Crystal structure of a conserved hypothetical protein, rv2844, from Mycobacterium tuberculosis
分子名称: CONSERVED HYPOTHETICAL ALANINE RICH PROTEIN
著者Yu, M, Bursey, E.H, Radhakannan, T, Kim, C.Y, Kaviratne, T, Woodruff, T, Segelke, B.W, Lekin, T, Toppani, D, Terwilliger, T.C, Hung, L.W, TB Structural Genomics Consortium (TBSGC), Integrated Center for Structure and Function Innovation (ISFI)
登録日2006-09-08
公開日2006-09-26
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of a conserved hypothetical protein, rv2844, from Mycobacterium tuberculosis
To be Published
6DG8
DownloadVisualize
BU of 6dg8 by Molmil
Full-length 5-HT3A receptor in a serotonin-bound conformation- State 2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 5-hydroxytryptamine receptor 3A, SEROTONIN, ...
著者Basak, S, Chakrapani, S.
登録日2018-05-17
公開日2018-11-07
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (3.89 Å)
主引用文献Cryo-EM reveals two distinct serotonin-bound conformations of full-length 5-HT3Areceptor.
Nature, 563, 2018
5HAO
DownloadVisualize
BU of 5hao by Molmil
Structure function studies of R. palustris RubisCO (M331A mutant; CABP-bound)
分子名称: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, MAGNESIUM ION, Ribulose bisphosphate carboxylase
著者Arbing, M.A, Shin, A, Satagopan, S, North, J.A, Tabita, F.R.
登録日2015-12-30
公開日2017-01-04
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.182 Å)
主引用文献Structure function studies of R. palustris RubisCO.
To Be Published
6DG7
DownloadVisualize
BU of 6dg7 by Molmil
Full-length 5-HT3A receptor in a serotonin-bound conformation- State 1
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 5-hydroxytryptamine receptor 3A, SEROTONIN, ...
著者Basak, S, Chakrapani, S.
登録日2018-05-17
公開日2018-11-07
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (3.32 Å)
主引用文献Cryo-EM reveals two distinct serotonin-bound conformations of full-length 5-HT3Areceptor.
Nature, 563, 2018
2H85
DownloadVisualize
BU of 2h85 by Molmil
Crystal Structure of Nsp 15 from SARS
分子名称: Putative orf1ab polyprotein
著者Ricagno, S, Egloff, M.P, Ulferts, R, Coutard, B, Nurizzo, D, Campanacci, V, Cambillau, C, Ziebuhr, J, Canard, B.
登録日2006-06-06
公開日2006-08-15
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure and mechanistic determinants of SARS coronavirus nonstructural protein 15 define an endoribonuclease family.
Proc.Natl.Acad.Sci.Usa, 103, 2006
3NGU
DownloadVisualize
BU of 3ngu by Molmil
Structure of Leishmania NDKb complexed with ADP.
分子名称: ADENOSINE-5'-DIPHOSPHATE, Nucleoside diphosphate kinase
著者Trindade, D.M, Sousa, T.A.C.B, Tonoli, C.C.C, Santos, C.R, Arni, R.K, Ward, R.J, Oliveira, A.H.C, Murakami, M.T.
登録日2010-06-13
公開日2011-04-27
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献Molecular adaptability of nucleoside diphosphate kinase b from trypanosomatid parasites: stability, oligomerization and structural determinants of nucleotide binding.
Mol Biosyst, 7, 2011
3NGR
DownloadVisualize
BU of 3ngr by Molmil
Crystal structure of Leishmania nucleoside diphosphate kinase b with unordered nucleotide-binding loop.
分子名称: Nucleoside diphosphate kinase, PHOSPHATE ION
著者Trindade, D.M, Sousa, T.A.C.B, Tonoli, C.C.C, Santos, C.R, Arni, R.K, Ward, R.J, Oliveira, A.H.C, Murakami, M.T.
登録日2010-06-13
公開日2011-04-27
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Molecular adaptability of nucleoside diphosphate kinase b from trypanosomatid parasites: stability, oligomerization and structural determinants of nucleotide binding.
Mol Biosyst, 7, 2011
5HJY
DownloadVisualize
BU of 5hjy by Molmil
Structure function studies of R. palustris RubisCO (I165T mutant; CABP-bound)
分子名称: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, CHLORIDE ION, MAGNESIUM ION, ...
著者Arbing, M.A, Shin, A, Cascio, D, Satagopan, S, North, J.A, Tabita, F.R.
登録日2016-01-13
公開日2017-01-18
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure function studies of R. palustris RubisCO.
To Be Published
4KI1
DownloadVisualize
BU of 4ki1 by Molmil
Primitive triclinic crystal form of the human IgE-Fc(epsilon)3-4 bound to its B cell receptor derCD23
分子名称: IG EPSILON CHAIN C REGION, LOW AFFINITY IMMUNOGLOBULIN EPSILON FC RECEPTOR, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Dhaliwal, B, Pang, M.O.Y, Sutton, B.J, Beavil, A.J.
登録日2013-05-01
公開日2014-03-05
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献A range of C3-C4 interdomain angles in IgE Fc accommodate binding to its receptor CD23.
Acta Crystallogr F Struct Biol Commun, 70, 2014
5VX4
DownloadVisualize
BU of 5vx4 by Molmil
VP8* of a G2P[4] Human Rotavirus
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Outer capsid protein VP4
著者Hu, L, Venkataram Prasad, B.V.
登録日2017-05-23
公開日2018-07-18
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Glycan recognition in globally dominant human rotaviruses.
Nat Commun, 9, 2018
4IUR
DownloadVisualize
BU of 4iur by Molmil
crystal structure of SHH1 SAWADEE domain in complex with H3K9me3 peptide
分子名称: CYMAL-4, Histone H3.2, H3(1-15)K9me3, ...
著者Patel, D.J, Du, J.
登録日2013-01-21
公開日2013-05-01
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.501 Å)
主引用文献Polymerase IV occupancy at RNA-directed DNA methylation sites requires SHH1.
Nature, 498, 2013
4IUP
DownloadVisualize
BU of 4iup by Molmil
crystal structure of Se-substituted arabidopsis thaliana SHH1 SAWADEE domain L200M/L218M mutant
分子名称: BETA-MERCAPTOETHANOL, CYMAL-4, SAWADEE HOMEODOMAIN HOMOLOG 1, ...
著者Du, J, Patel, D.J.
登録日2013-01-21
公開日2013-05-01
最終更新日2013-07-10
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Polymerase IV occupancy at RNA-directed DNA methylation sites requires SHH1.
Nature, 498, 2013
4J22
DownloadVisualize
BU of 4j22 by Molmil
Tankyrase 2 in complex with 3-chloro-4-(4-methyl-2-oxo-1,2-dihydroquinolin-7-yl)-N-[2-(morpholin-4-yl)ethyl]benzamide
分子名称: 3-chloro-4-(4-methyl-2-oxo-1,2-dihydroquinolin-7-yl)-N-[2-(morpholin-4-yl)ethyl]benzamide, SULFATE ION, Tankyrase-2, ...
著者Jansson, A.E, Larsson, E.A, Nordlund, P.L.
登録日2013-02-04
公開日2013-06-26
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.12 Å)
主引用文献Fragment-based ligand design of novel potent inhibitors of tankyrases.
J.Med.Chem., 56, 2013
4IUE
DownloadVisualize
BU of 4iue by Molmil
Tankyrase in complex with 7-(2-fluorophenyl)-4-methyl-1,2-dihydroquinolin-2-one
分子名称: 7-(2-fluorophenyl)-4-methylquinolin-2(1H)-one, SULFATE ION, Tankyrase-2, ...
著者Jansson, A.E, Larsson, E.A, Nordlund, P.L.
登録日2013-01-21
公開日2013-06-26
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献Fragment-based ligand design of novel potent inhibitors of tankyrases.
J.Med.Chem., 56, 2013
4IUV
DownloadVisualize
BU of 4iuv by Molmil
crystal structure of SHH1 SAWADEE domain in complex with H3K4me1K9me1 peptide
分子名称: CYMAL-4, Histone H3.2, H3(1-15)K9me3, ...
著者Du, J, Patel, D.J.
登録日2013-01-21
公開日2013-05-01
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Polymerase IV occupancy at RNA-directed DNA methylation sites requires SHH1.
Nature, 498, 2013
3UDJ
DownloadVisualize
BU of 3udj by Molmil
Crystal Structure of BACE with Compound 5
分子名称: 1,2-ETHANEDIOL, Beta-secretase 1, DI(HYDROXYETHYL)ETHER, ...
著者Efremov, I.V, Vajdos, F.F, Borzilleri, K, Capetta, S, Dorff, P, Dutra, J, Mansour, M, Oborski, C, O'Connell, T, O'Sullivan, T.J, Pandit, J, Wang, H, Withka, J.
登録日2011-10-28
公開日2012-04-18
最終更新日2013-06-19
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Discovery and optimization of a novel spiropyrrolidine inhibitor of {beta}-secretase (BACE1) through fragment-based drug design.
J.Med.Chem., 55, 2012
3UDR
DownloadVisualize
BU of 3udr by Molmil
Crystal Structure of BACE with Compound 14
分子名称: 1,2-ETHANEDIOL, 1-cyanocyclohexyl (3S,5'R)-2-oxo-1,2-dihydrospiro[indole-3,3'-pyrrolidine]-5'-carboxylate, Beta-secretase 1, ...
著者Efremov, I.V, Vajdos, F.F, Borzilleri, K, Capetta, S, Dorff, P, Dutra, J, Mansour, M, Oborski, C, O'Connell, T, O'Sullivan, T.J, Pandit, J, Wang, H, Withka, J.
登録日2011-10-28
公開日2012-04-18
最終更新日2018-04-04
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Discovery and optimization of a novel spiropyrrolidine inhibitor of {beta}-secretase (BACE1) through fragment-based drug design.
J.Med.Chem., 55, 2012
2JF6
DownloadVisualize
BU of 2jf6 by Molmil
Structure of inactive mutant of Strictosidine Glucosidase in complex with strictosidine
分子名称: METHYL (2S,3R,4S)-3-ETHYL-2-(BETA-D-GLUCOPYRANOSYLOXY)-4-[(1S)-2,3,4,9-TETRAHYDRO-1H-BETA-CARBOLIN-1-YLMETHYL]-3,4-DIHYDRO-2H-PYRAN-5-CARBOXYLATE, STRICTOSIDINE-O-BETA-D-GLUCOSIDASE
著者Barleben, L, Panjikar, S, Ruppert, M, Koepke, J, Stockigt, J.
登録日2007-01-26
公開日2008-02-05
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.82 Å)
主引用文献Molecular Architecture of Strictosidine Glucosidase - the Gateway to the Biosynthesis of the Monoterpenoid Indole Alkaloid Family
Plant Cell, 19, 2007
3UDM
DownloadVisualize
BU of 3udm by Molmil
Crystal Structure of BACE with Compound 8
分子名称: 1,2-ETHANEDIOL, Beta-secretase 1, DI(HYDROXYETHYL)ETHER, ...
著者Efremov, I.V, Vajdos, F.F, Borzilleri, K, Capetta, S, Dorff, P, Dutra, J, Mansour, M, Oborski, C, O'Connell, T, O'Sullivan, T.J, Pandit, J, Wang, H, Withka, J.
登録日2011-10-28
公開日2012-04-18
最終更新日2017-11-08
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Discovery and optimization of a novel spiropyrrolidine inhibitor of {beta}-secretase (BACE1) through fragment-based drug design.
J.Med.Chem., 55, 2012
3UDH
DownloadVisualize
BU of 3udh by Molmil
Crystal Structure of BACE with Compound 1
分子名称: (3S)-spiro[indole-3,3'-pyrrolidin]-2(1H)-one, 1,2-ETHANEDIOL, Beta-secretase 1, ...
著者Efremov, I.V, Vajdos, F.F, Borzilleri, K, Capetta, S, Dorff, P, Dutra, J, Mansour, M, Oborski, C, O'Connell, T, O'Sullivan, T.J, Pandit, J, Wang, H, Withka, J.
登録日2011-10-28
公開日2012-04-18
最終更新日2017-11-08
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Discovery and optimization of a novel spiropyrrolidine inhibitor of {beta}-secretase (BACE1) through fragment-based drug design.
J.Med.Chem., 55, 2012
5RY8
DownloadVisualize
BU of 5ry8 by Molmil
INPP5D PanDDA analysis group deposition -- Crystal Structure of the phosphatase and C2 domains of SHIP1 in complex with Z1374778753
分子名称: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DIMETHYL SULFOXIDE, MANGANESE (II) ION, ...
著者Bradshaw, W.J, Newman, J.A, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Gileadi, O.
登録日2020-10-30
公開日2020-11-11
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.43 Å)
主引用文献Regulation of inositol 5-phosphatase activity by the C2 domain of SHIP1 and SHIP2.
Structure, 2024

222624

件を2024-07-17に公開中

PDB statisticsPDBj update infoContact PDBjnumon