PDB: 13252 件ウェブページステータス検索Chemie searchBIRD

---

6EU1	RNA Polymerase III - open DNA complex (OC-POL3). 分子名称: DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, DNA-directed RNA polymerase III subunit RPC2, ... 著者 Abascal-Palacios, G, Ramsay, E.P, Beuron, F, Morris, E, Vannini, A. 登録日 2017-10-27 公開日 2018-01-17 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Structural basis of RNA polymerase III transcription initiation. Nature, 553, 2018
6F40	RNA Polymerase III open complex 分子名称: DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, DNA-directed RNA polymerase III subunit RPC2, ... 著者 Vorlaender, M.K, Khatter, H, Wetzel, R, Hagen, W.J.H, Mueller, C.W. 登録日 2017-11-29 公開日 2018-01-17 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3.7 Å) 主引用文献 Molecular mechanism of promoter opening by RNA polymerase III. Nature, 553, 2018
6EU0	RNA Polymerase III open pre-initiation complex (OC-PIC) 分子名称: DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, DNA-directed RNA polymerase III subunit RPC2, ... 著者 Abascal-Palacios, G, Ramsay, E.P, Beuron, F, Morris, E, Vannini, A. 登録日 2017-10-27 公開日 2018-01-17 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (4 Å) 主引用文献 Structural basis of RNA polymerase III transcription initiation. Nature, 553, 2018
6F44	RNA Polymerase III closed complex CC2. 分子名称: DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, DNA-directed RNA polymerase III subunit RPC2, ... 著者 Vorlaender, M.K, Khatter, H, Wetzel, R, Hagen, W.J.H, Mueller, C.W. 登録日 2017-11-29 公開日 2018-01-17 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (4.2 Å) 主引用文献 Molecular mechanism of promoter opening by RNA polymerase III. Nature, 553, 2018
6F42	RNA Polymerase III closed complex CC1. 分子名称: DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, DNA-directed RNA polymerase III subunit RPC2, ... 著者 Vorlaender, M.K, Khatter, H, Wetzel, R, Hagen, W.J.H, Mueller, C.W. 登録日 2017-11-29 公開日 2018-01-17 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (5.5 Å) 主引用文献 Molecular mechanism of promoter opening by RNA polymerase III. Nature, 553, 2018
3K1F	Crystal structure of RNA Polymerase II in complex with TFIIB 分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ... 著者 Kostrewa, D, Zeller, M.E, Armache, K.-J, Seizl, M, Leike, K, Thomm, M, Cramer, P. 登録日 2009-09-27 公開日 2009-11-10 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (4.3 Å) 主引用文献 RNA polymerase II-TFIIB structure and mechanism of transcription initiation. Nature, 462, 2009
3J0K	Orientation of RNA polymerase II within the human VP16-Mediator-pol II-TFIIF assembly 分子名称: DNA-directed RNA polymerase II 13.6 kDa polypeptide, DNA-directed RNA polymerase II 140 kDa polypeptide, DNA-directed RNA polymerase II 19 kDa polypeptide, ... 著者 Bernecky, C, Grob, P, Ebmeier, C.C, Nogales, E, Taatjes, D.J. 登録日 2011-10-04 公開日 2011-10-19 最終更新日 2018-07-18 実験手法 ELECTRON MICROSCOPY (36 Å) 主引用文献 Molecular architecture of the human Mediator-RNA polymerase II-TFIIF assembly. Plos Biol., 9, 2011
4XHA	Crystal structure of Thosea asigna virus RNA-dependent RNA polymerase (RdRP) complexed with Lu3+ 分子名称: GLYCEROL, LUTETIUM (III) ION, RNA-dependent RNA polymerase, ... 著者 Ferrero, D.S, Buxaderas, M, Rodriguez, J.F, Verdaguer, N. 登録日 2015-01-05 公開日 2015-11-04 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 The Structure of the RNA-Dependent RNA Polymerase of a Permutotetravirus Suggests a Link between Primer-Dependent and Primer-Independent Polymerases. Plos Pathog., 11, 2015
4XHI	Crystal structure of native Thosea asigna virus RNA-dependent RNA polymerase (RdRP) at 2.15 Angstrom resolution 分子名称: GLYCEROL, RNA-dependent RNA polymerase, SULFATE ION 著者 Ferrero, D.S, Buxaderas, M, Rodriguez, J.F, Verdaguer, N. 登録日 2015-01-05 公開日 2015-11-04 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 The Structure of the RNA-Dependent RNA Polymerase of a Permutotetravirus Suggests a Link between Primer-Dependent and Primer-Independent Polymerases. Plos Pathog., 11, 2015
5CX6	Crystal structure of Thosea asigna virus RNA-dependent RNA polymerase (RdRP) complexed with CDP 分子名称: CYTIDINE-5'-DIPHOSPHATE, GLYCEROL, MAGNESIUM ION, ... 著者 Ferrero, D.S, Buxaderas, M, Rodriguez, J.F, Verdaguer, N. 登録日 2015-07-28 公開日 2015-11-11 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 The Structure of the RNA-Dependent RNA Polymerase of a Permutotetravirus Suggests a Link between Primer-Dependent and Primer-Independent Polymerases. Plos Pathog., 11, 2015
5CYR	Crystal structure of Thosea asigna virus RNA-dependent RNA polymerase (RdRP) complexed with ATP and ssRNA 分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, PHOSPHATE ION, ... 著者 Ferrero, D.S, Buxaderas, M, Rodriguez, J.F, Verdaguer, N. 登録日 2015-07-30 公開日 2015-11-11 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (3.504 Å) 主引用文献 The Structure of the RNA-Dependent RNA Polymerase of a Permutotetravirus Suggests a Link between Primer-Dependent and Primer-Independent Polymerases. Plos Pathog., 11, 2015
7Q0J	RNA polymerase elongation complex in more-swiveled conformation 分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ... 著者 Zhu, C, Guo, X, Weixlbaumer, A. 登録日 2021-10-15 公開日 2022-03-23 最終更新日 2024-07-17 実験手法 ELECTRON MICROSCOPY (4.3 Å) 主引用文献 Transcription factors modulate RNA polymerase conformational equilibrium. Nat Commun, 13, 2022
7Q0K	RNA polymerase elongation complex in less-swiveled conformation 分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ... 著者 Zhu, C, Guo, X, Weixlbaumer, A. 登録日 2021-10-15 公開日 2022-03-23 最終更新日 2024-07-17 実験手法 ELECTRON MICROSCOPY (4 Å) 主引用文献 Transcription factors modulate RNA polymerase conformational equilibrium. Nat Commun, 13, 2022
6HMS	Cryo-EM map of DNA polymerase D from Pyrococcus abyssi in complex with DNA 分子名称: DNA (5'-D(*GP*AP*GP*AP*CP*GP*GP*GP*CP*CP*GP*CP*GP*TP*C)-3'), DNA (5'-D(P*TP*GP*AP*CP*GP*CP*GP*GP*CP*CP*CP*GP*TP*CP*TP*C)-3'), DNA polymerase II large subunit,DNA polymerase II large subunit, ... 著者 Raia, P, Carroni, M, Sauguet, L. 登録日 2018-09-12 公開日 2019-01-30 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (7.1 Å) 主引用文献 Structure of the DP1-DP2 PolD complex bound with DNA and its implications for the evolutionary history of DNA and RNA polymerases. PLoS Biol., 17, 2019
6HMF	D-family DNA polymerase - DP1 subunit (3'-5' proof-reading exonuclease) H451 proof-reading deficient variant 分子名称: ACETATE ION, CACODYLATE ION, CALCIUM ION, ... 著者 Raia, P, Delarue, M, Sauguet, L. 登録日 2018-09-12 公開日 2019-01-30 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Structure of the DP1-DP2 PolD complex bound with DNA and its implications for the evolutionary history of DNA and RNA polymerases. PLoS Biol., 17, 2019
5FSW	RNA dependent RNA polymerase QDE-1 from Thielavia terrestris 分子名称: RNA DEPENDENT RNA POLYMERASE QDE-1 著者 Qian, X, Hamid, F.M, El Sahili, A, Darwis, D.A, Wong, Y.H, Bhushan, S, Makeyev, E.V, Lescar, J. 登録日 2016-01-08 公開日 2016-03-02 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (3.19 Å) 主引用文献 Functional Evolution in Orthologous Cell-Encoded RNA-Dependent RNA Polymerases J.Biol.Chem., 291, 2016
2WB1	The complete structure of the archaeal 13-subunit DNA-directed RNA Polymerase 分子名称: DNA-DIRECTED RNA POLYMERASE RPO10 SUBUNIT, DNA-DIRECTED RNA POLYMERASE RPO11 SUBUNIT, DNA-DIRECTED RNA POLYMERASE RPO12 SUBUNIT, ... 著者 Korkhin, Y, Unligil, U.M, Littlefield, O, Nelson, P.J, Stuart, D.I, Sigler, P.B, Bell, S.D, Abrescia, N.G.A. 登録日 2009-02-19 公開日 2009-05-19 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (3.52 Å) 主引用文献 Evolution of Complex RNA Polymerase: The Complete Archaeal RNA Polymerase Structure Plos Biol., 7, 2009
2WAQ	The complete structure of the archaeal 13-subunit DNA-directed RNA Polymerase 分子名称: DNA-DIRECTED RNA POLYMERASE RPO10 SUBUNIT, DNA-DIRECTED RNA POLYMERASE RPO11 SUBUNIT, DNA-DIRECTED RNA POLYMERASE RPO12 SUBUNIT, ... 著者 Korkhin, Y, Unligil, U.M, Littlefield, O, Nelson, P.J, Stuart, D.I, Sigler, P.B, Bell, S.D, Abrescia, N.G.A. 登録日 2009-02-11 公開日 2009-05-19 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (3.35 Å) 主引用文献 Evolution of complex RNA polymerases: the complete archaeal RNA polymerase structure. Plos Biol., 7, 2009
2Y0S	Crystal structure of Sulfolobus shibatae RNA polymerase in P21 space group 分子名称: DNA-DIRECTED RNA POLYMERASE, DNA-DIRECTED RNA POLYMERASE SUBUNIT A'', DNA-DIRECTED RNA POLYMERASE SUBUNIT D, ... 著者 Wojtas, M, Peralta, B, Ondiviela, M, Mogni, M, Bell, S.D, Abrescia, N.G.A. 登録日 2010-12-07 公開日 2011-02-16 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (3.8 Å) 主引用文献 Archaeal RNA polymerase: the influence of the protruding stalk in crystal packing and preliminary biophysical analysis of the Rpo13 subunit. Biochem. Soc. Trans., 39, 2011
4C2M	Structure of RNA polymerase I at 2.8 A resolution 分子名称: DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA12, DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA135, DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA14, ... 著者 Engel, C, Sainsbury, S, Cheung, A.C, Kostrewa, D, Cramer, P. 登録日 2013-08-19 公開日 2013-10-23 最終更新日 2015-08-19 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 RNA Polymerase I Structure and Transcription Regulation. Nature, 502, 2013
3LU0	Molecular model of Escherichia coli core RNA polymerase 分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ... 著者 Darst, S.A. 登録日 2010-02-16 公開日 2010-09-29 最終更新日 2024-02-21 実験手法 ELECTRON MICROSCOPY (11.2 Å) 主引用文献 Complete structural model of Escherichia coli RNA polymerase from a hybrid approach. Plos Biol., 8, 2010
4R0E	Crystal Structure of the Poliovirus RNA-Dependent RNA Polymerase Low-Fidelity Mutant 3Dpol H273R 分子名称: RNA-directed RNA polymerase 著者 Marcotte, L.L, Gohara, D.W, Filman, D.J, Hogle, J.M. 登録日 2014-07-30 公開日 2014-11-12 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Structural Dynamics as a Contributor to Error-prone Replication by an RNA-dependent RNA Polymerase. J.Biol.Chem., 289, 2014
7NK6	1918 H1N1 Viral influenza polymerase heterotrimer with Nb8204 分子名称: Nb8204, Polymerase acidic protein, Polymerase basic protein 2,Polymerase basic protein 2, ... 著者 Keown, J.R, Carrique, L, Fodor, E, Grimes, J.M. 登録日 2021-02-17 公開日 2021-12-01 最終更新日 2022-02-09 実験手法 ELECTRON MICROSCOPY (6.72 Å) 主引用文献 Mapping inhibitory sites on the RNA polymerase of the 1918 pandemic influenza virus using nanobodies. Nat Commun, 13, 2022
7NIS	1918 H1N1 Viral influenza polymerase heterotrimer with Nb8192 core 分子名称: Nanobody8192 core, Polymerase acidic protein, Polymerase basic protein 2,Immunoglobulin G-binding protein A, ... 著者 Keown, J.R, Carrique, L, Fodor, E, Grimes, J.M. 登録日 2021-02-13 公開日 2021-12-01 最終更新日 2022-02-09 実験手法 ELECTRON MICROSCOPY (5.96 Å) 主引用文献 Mapping inhibitory sites on the RNA polymerase of the 1918 pandemic influenza virus using nanobodies. Nat Commun, 13, 2022
7NK1	1918 Influenza virus polymerase heterotirmer in complex with vRNA promoters and Nb8201 分子名称: Nanobody8201, Polymerase acidic protein, Polymerase basic protein 2,Immunoglobulin G-binding protein A, ... 著者 Keown, J.R, Carrique, L, Fodor, E, Grimes, J.M. 登録日 2021-02-17 公開日 2021-12-01 最終更新日 2022-02-09 実験手法 ELECTRON MICROSCOPY (4.22 Å) 主引用文献 Mapping inhibitory sites on the RNA polymerase of the 1918 pandemic influenza virus using nanobodies. Nat Commun, 13, 2022

<12345678910111213141516>