PDB: 42091 件ウェブページステータス検索Chemie searchBIRD

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1J90	Crystal Structure of Drosophila Deoxyribonucleoside Kinase 分子名称: 2'-DEOXYCYTIDINE, Deoxyribonucleoside kinase, SULFATE ION 著者 Johansson, K, Ramaswamy, S, Ljungkrantz, C, Knecht, W, Piskur, J, Munch-Petersen, B, Eriksson, S, Eklund, H. 登録日 2001-05-23 公開日 2001-11-28 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.56 Å) 主引用文献 Structural basis for substrate specificities of cellular deoxyribonucleoside kinases. Nat.Struct.Biol., 8, 2001
7ABG	Human pre-Bact-1 spliceosome 分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, 7-METHYL-GUANOSINE-5'-TRIPHOSPHATE-5'-GUANOSINE, Cell division cycle 5-like protein, ... 著者 Townsend, C, Kastner, B, Leelaram, M.N, Bertram, K, Stark, H, Luehrmann, R. 登録日 2020-09-07 公開日 2020-12-23 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (7.8 Å) 主引用文献 Mechanism of protein-guided folding of the active site U2/U6 RNA during spliceosome activation. Science, 370, 2020
7ABI	Human pre-Bact-2 spliceosome 分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, BUD13 homolog, Beta-catenin-like protein 1, ... 著者 Townsend, C, Kastner, B, Leelaram, M.N, Bertram, K, Stark, H, Luehrmann, R. 登録日 2020-09-07 公開日 2021-02-10 最終更新日 2025-04-09 実験手法 ELECTRON MICROSCOPY (8 Å) 主引用文献 Mechanism of protein-guided folding of the active site U2/U6 RNA during spliceosome activation. Science, 370, 2020
4JEP	Crystal structure of Toxoplasma gondii nucleoside triphosphate diphosphohydrolase 1 (NTPDase1) 分子名称: Nucleoside-triphosphatase 2 著者 Krug, U, Totzauer, R, Strater, N. 登録日 2013-02-27 公開日 2013-04-10 最終更新日 2024-11-20 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 The crystal structure of Toxoplasma gondii nucleoside triphosphate diphosphohydrolase 1 represents a conformational intermediate in the reductive activation mechanism of the tetrameric enzyme. Proteins, 81, 2013
4A5B	Crystal structure of the C258S/C268S variant of Toxoplasma gondii nucleoside triphosphate diphosphohydrolase 1 (NTPDase1) 分子名称: NUCLEOSIDE-TRIPHOSPHATASE 2 著者 Krug, U, Zebisch, M, Strater, N. 登録日 2011-10-24 公開日 2011-11-30 最終更新日 2024-11-20 実験手法 X-RAY DIFFRACTION (2.48 Å) 主引用文献 Structural Insight Into Activation Mechanism of Toxoplasma Gondii Nucleoside Triphosphate Diphosphohydrolases by Disulfide Reduction. J.Biol.Chem., 287, 2012
4DZ6	Transition state mimic of nucleoside-diphosphate kinase from borrelia burgdorferi with bound vanadate and adp 分子名称: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, Nucleoside diphosphate kinase, ... 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2012-02-29 公開日 2012-03-14 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structure and analysis of nucleoside diphosphate kinase from Borrelia burgdorferi prepared in a transition-state complex with ADP and vanadate moieties. Acta Crystallogr F Struct Biol Commun, 74, 2018
2VPP	Drosophila melanogaster deoxyribonucleoside kinase successfully activates gemcitabine in transduced cancer cell lines 分子名称: DEOXYNUCLEOSIDE KINASE, GEMCITABINE, SULFATE ION 著者 Knecht, W, Mikkelsen, N.E, Clausen, A, Willer, M, Gojkovic, Z, Piskur, J. 登録日 2008-03-03 公開日 2009-03-24 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Drosophila Melanogaster Deoxyribonucleoside Kinase Activates Gemcitabine. Biochem.Biophys.Res.Commun., 382, 2009
7ABF	Human pre-Bact-1 spliceosome core structure 分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, GUANOSINE-5'-TRIPHOSPHATE, INOSITOL HEXAKISPHOSPHATE, ... 著者 Townsend, C, Kastner, B, Leelaram, M.N, Bertram, K, Stark, H, Luehrmann, R. 登録日 2020-09-07 公開日 2020-12-09 最終更新日 2025-04-09 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 Mechanism of protein-guided folding of the active site U2/U6 RNA during spliceosome activation. Science, 370, 2020
5DW7	Crystal structure of the unliganded geosmin synthase N-terminal domain from Streptomyces coelicolor 分子名称: Germacradienol/geosmin synthase 著者 Lombardi, P.M, Harris, G.G, Pemberton, T.A, Matsui, T, Weiss, T.M, Cole, K.E, Koksal, M, Murphy, F.V, Vedula, L.S, Chou, W.K, Cane, D.E, Christianson, D.W. 登録日 2015-09-22 公開日 2015-11-25 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (3.202 Å) 主引用文献 Structural Studies of Geosmin Synthase, a Bifunctional Sesquiterpene Synthase with alpha alpha Domain Architecture That Catalyzes a Unique Cyclization-Fragmentation Reaction Sequence. Biochemistry, 54, 2015
2AZ3	Structure of a halophilic nucleoside diphosphate kinase from Halobacterium salinarum in complex with CDP 分子名称: CYTIDINE-5'-DIPHOSPHATE, MAGNESIUM ION, Nucleoside diphosphate kinase 著者 Besir, H, Zeth, K, Bracher, A, Heider, U, Ishibashi, M, Tokunaga, M, Oesterhelt, D. 登録日 2005-09-09 公開日 2005-12-20 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structure of a halophilic nucleoside diphosphate kinase from Halobacterium salinarum Febs Lett., 579, 2005
4UOF	Crystallographic structure of nucleoside diphosphate kinase from Litopenaeus vannamei complexed with dADP 分子名称: 2'-DEOXYADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, NUCLEOSIDE DIPHOSPHATE KINASE 著者 Lopez-Zavala, A.A, Stojanoff, V, Rudino-Pinera, E, Sotelo-Mundo, R.R. 登録日 2014-06-03 公開日 2014-09-10 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.102 Å) 主引用文献 Structure of Nucleoside Diphosphate Kinase from the Pacific Shrimp (Litopenaeus Vannamei) in Binary Complexes with Purine and Pyrimidine Nucleoside Diphosphates Acta Crystallogr.,Sect.F, 79, 2014
4UOG	Crystallographic structure of nucleoside diphosphate kinase from Litopenaeus vannamei complexed with dCDP 分子名称: DEOXYCYTIDINE DIPHOSPHATE, MAGNESIUM ION, NUCLEOSIDE DIPHOSPHATE KINASE 著者 Lopez-Zavala, A.A, Stojanoff, V, Rudino-Pinera, E, Sotelo-Mundo, R.R. 登録日 2014-06-03 公開日 2014-09-10 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structure of Nucleoside Diphosphate Kinase from Pacific Shrimp (Litopenaeus Vannamei) in Binary Complexes with Purine and Pyrimidine Nucleoside Diphosphates Acta Crystallogr.,Sect.F, 79, 2014
4UOH	Crystallographic structure of nucleoside diphosphate kinase from Litopenaeus vannamei complexed with ADP 分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, NUCLEOSIDE DIPHOSPHATE KINASE 著者 Lopez-Zavala, A.A, Guevara-Hernandez, E, Stojanoff, V, Rudino-Pinera, E, Sotelo-Mundo, R.R. 登録日 2014-06-03 公開日 2014-09-10 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (2.007 Å) 主引用文献 Structure of Nucleoside Diphosphate Kinase from Pacific Shrimp (Litopenaeus Vannamei) in Binary Complexes with Purine and Pyrimidine Nucleoside Diphosphates Acta Crystallogr.,Sect.F, 79, 2014
4VHB	THIOCYANATE ADDUCT OF THE BACTERIAL HEMOGLOBIN FROM VITREOSCILLA SP. 分子名称: PROTEIN (HEMOGLOBIN), PROTOPORPHYRIN IX CONTAINING FE, THIOCYANATE ION 著者 Bolognesi, M, Boffi, A, Coletta, M, Mozzarelli, A, Pesce, A, Tarricone, C, Ascenzi, P. 登録日 1999-03-11 公開日 1999-08-31 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Anticooperative ligand binding properties of recombinant ferric Vitreoscilla homodimeric hemoglobin: a thermodynamic, kinetic and X-ray crystallographic study. J.Mol.Biol., 291, 1999
1F8Y	CRYSTAL STRUCTURE ANALYSIS OF NUCLEOSIDE 2-DEOXYRIBOSYLTRANSFERASE COMPLEXED WITH 5-METHYL-2'-DEOXYPSEUDOURIDINE 分子名称: 2'-deoxy-1-methyl-pseudouridine, NUCLEOSIDE 2-DEOXYRIBOSYLTRANSFERASE 著者 Armstrong, S.R, Cook, W.J, Short, S.A, Ealick, S.E. 登録日 2000-07-05 公開日 2000-08-09 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Crystal structures of nucleoside 2-deoxyribosyltransferase in native and ligand-bound forms reveal architecture of the active site. Structure, 4, 1996
1ZMX	Crystal structure of D. melanogaster deoxyribonucleoside kinase N64D mutant in complex with thymidine 分子名称: Deoxynucleoside kinase, SULFATE ION, THYMIDINE 著者 Welin, M, Skovgaard, T, Knecht, W, Berenstein, D, Munch-Petersen, B, Piskur, J, Eklund, H. 登録日 2005-05-11 公開日 2005-05-24 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Structural basis for the changed substrate specificity of Drosophila melanogaster deoxyribonucleoside kinase mutant N64D. Febs J., 272, 2005
1ZM7	Crystal structure of D. melanogaster deoxyribonucleoside kinase mutant N64D in complex with dTTP 分子名称: Deoxynucleoside kinase, MAGNESIUM ION, THYMIDINE-5'-TRIPHOSPHATE 著者 Welin, M, Skovgaard, T, Knecht, W, Berenstein, D, Munch-Petersen, B, Piskur, J, Eklund, H. 登録日 2005-05-10 公開日 2005-05-17 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structural basis for the changed substrate specificity of Drosophila melanogaster deoxyribonucleoside kinase mutant N64D. Febs J., 272, 2005
3S05	mEos2 Fluorescent Protein-Green Form 分子名称: Green to red photoconvertible GPF-like protein EosFP 著者 Zhang, M.S, Wu, L.J, Xu, P.Y, Liu, Y.F, Xu, T. 登録日 2011-05-13 公開日 2011-11-16 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (2.204 Å) 主引用文献 mEos2 Fluorescent Protein-Green Form To be Published
1EHW	HUMAN NUCLEOSIDE DIPHOSPHATE KINASE 4 分子名称: NUCLEOSIDE DIPHOSPHATE KINASE, SULFATE ION 著者 Milon, L, Meyer, P, Chiadmi, M, Munier, A, Johansson, M, Karlsson, A, Lascu, I, Capeau, J, Janin, J, Lacombe, M.-L. 登録日 2000-02-23 公開日 2000-05-17 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 The human nm23-H4 gene product is a mitochondrial nucleoside diphosphate kinase. J.Biol.Chem., 275, 2000
5OLN	X-Ray Structure of the Complex Pyrimidine-nucleoside phosphorylase from Bacillus subtilis at 1.88 A 分子名称: 1,2-ETHANEDIOL, IMIDAZOLE, Pyrimidine-nucleoside phosphorylase, ... 著者 Balaev, V.V, Prokofev, I.I, Gabdoulkhakov, A.G, Betzel, C, Lashkov, A.A. 登録日 2017-07-28 公開日 2018-04-18 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.88 Å) 主引用文献 Crystal structure of pyrimidine-nucleoside phosphorylase from Bacillus subtilis in complex with imidazole and sulfate. Acta Crystallogr F Struct Biol Commun, 74, 2018
3AGR	Crystal structure of nucleoside triphosphate hydrolases from Neospora caninum 分子名称: Nucleoside triphosphate hydrolase 著者 Matoba, K, Shiba, T, Seiki, M, Asai, T, Harada, S. 登録日 2010-04-06 公開日 2011-04-06 最終更新日 2024-11-13 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Crystal structure of nucleoside triphosphate hydrolases from Neospora caninum To be Published
1V48	Calf spleen purine nucleoside phosphorylase (PNP) binary complex with 9-(5,5-difluoro-5-phosphonopenthyl)guanine 分子名称: 9-(5,5-DIFLUORO-5-PHOSPHONOPENTYL)GUANINE, MAGNESIUM ION, Purine nucleoside phosphorylase, ... 著者 Luic, M, Koellner, G, Yokomatsu, T, Shibuya, S, Bzowska, A. 登録日 2003-11-11 公開日 2004-08-03 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Calf spleen purine-nucleoside phosphorylase: crystal structure of the binary complex with a potent multisubstrate analogue inhibitor. Acta Crystallogr.,Sect.D, 60, 2004
3ZTO	Orthorhombic crystal form C222 of the Aquifex aeolicus nucleoside diphosphate kinase 分子名称: NUCLEOSIDE DIPHOSPHATE KINASE, SULFATE ION 著者 Boissier, F, Georgescauld, F, Moynie, L, Dupuy, J.-W, Sarger, C, Podar, M, Lascu, I, Giraud, M.-F, Dautant, A. 登録日 2011-07-12 公開日 2012-03-14 最終更新日 2024-11-06 実験手法 X-RAY DIFFRACTION (1.47 Å) 主引用文献 An Intersubunit Disulfide Bridge Stabilizes the Tetrameric Nucleoside Diphosphate Kinase of Aquifex Aeolicus. Proteins, 80, 2012
3ZTS	Hexagonal form P6122 of the Aquifex aeolicus nucleoside diphosphate kinase (FINAL STAGE OF RADIATION DAMAGE) 分子名称: NUCLEOSIDE DIPHOSPHATE KINASE 著者 Boissier, F, Georgescauld, F, Moynie, L, Dupuy, J.-W, Sarger, C, Podar, M, Lascu, I, Giraud, M.-F, Dautant, A. 登録日 2011-07-12 公開日 2012-03-14 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 An Inter-Subunit Disulphide Bridge Stabilizes the Tetrameric Nucleoside Diphosphate Kinase of Aquifex Aeolicus Proteins, 80, 2012
3ZTR	Hexagonal form P6122 of the Aquifex aeolicus nucleoside diphosphate kinase (FIRST STAGE OF RADIATION DAMAGE) 分子名称: NUCLEOSIDE DIPHOSPHATE KINASE 著者 Boissier, F, Georgescauld, F, Moynie, L, Dupuy, J.-W, Sarger, C, Podar, M, Lascu, I, Giraud, M.-F, Dautant, A. 登録日 2011-07-12 公開日 2012-03-14 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 An Inter-Subunit Disulphide Bridge Stabilizes the Tetrameric Nucleoside Diphosphate Kinase of Aquifex Aeolicus Proteins, 80, 2012

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