PDB: 41646 件ウェブページステータス検索Chemie searchBIRD

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4QU0	Caspase-3 Y195AV266H 分子名称: ACE-ASP-GLU-VAL-ASP-CHLOROMETHYLKETONE INHIBITOR, AZIDE ION, Caspase-3 著者 Cade, C, Swartz, P.D, MacKenzie, S.H, Clark, A.C. 登録日 2014-07-10 公開日 2014-11-05 最終更新日 2017-11-22 実験手法 X-RAY DIFFRACTION (1.954 Å) 主引用文献 Modifying caspase-3 activity by altering allosteric networks. Biochemistry, 53, 2014
4QUE	Caspase-3 Y195FV266H 分子名称: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, ACE-ASP-GLU-VAL-ASP-CHLOROMETHYLKETONE INHIBITOR, AZIDE ION, ... 著者 Cade, C, Swartz, P.D, MacKenzie, S.H, Clark, A.C. 登録日 2014-07-10 公開日 2014-11-05 最終更新日 2017-11-22 実験手法 X-RAY DIFFRACTION (1.843 Å) 主引用文献 Modifying caspase-3 activity by altering allosteric networks. Biochemistry, 53, 2014
6F5P	A mechanism for the activation of the influenza virus transcriptase 分子名称: ALA-ALA-ALA-ALA-ALA-ALA-ALA-ALA-ALA-ALA, DNA-directed RNA polymerase subunit, MAGNESIUM ION, ... 著者 Serna Martin, I, Grimes, J.M. 登録日 2017-12-02 公開日 2018-09-19 実験手法 X-RAY DIFFRACTION (4.14 Å) 主引用文献 A Mechanism for the Activation of the Influenza Virus Transcriptase. Mol. Cell, 70, 2018
2YPR	Crystal structure of the DNA binding ETS domain of human protein FEV 分子名称: GLYCEROL, PROTEIN FEV 著者 Allerston, C.K, Cooper, C, Vollmar, M, Krojer, T, von Delft, F, Weigelt, J, Arrowsmith, C.H, Bountra, C, Edwards, A, Gileadi, O. 登録日 2012-10-31 公開日 2013-01-16 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.64 Å) 主引用文献 Structures of the Ets Domains of Transcription Factors Etv1, Etv4, Etv5 and Fev: Determinants of DNA Binding and Redox Regulation by Disulfide Bond Formation. J.Biol.Chem., 290, 2015
2YQB	Structure of P93A variant of three-domain heme-Cu nitrite reductase from Ralstonia pickettii at 1.4 A resolution 分子名称: COPPER (II) ION, COPPER-CONTAINING NITRITE REDUCTASE, HEME C 著者 Antonyuk, S.V, Han, C, Eady, R.R, Hasnain, S.S. 登録日 2012-11-07 公開日 2013-04-03 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.41 Å) 主引用文献 Structures of protein-protein complexes involved in electron transfer. Nature, 496, 2013
6EUO	Crystal structure of APO Fe(II)/alpha-ketoglutarate dependent dioxygenase KDO5 分子名称: D-MALATE, FE (III) ION, GLYCEROL, ... 著者 Isabet, T, Stura, E, Legrand, P, Zaparucha, A, Bastard, K. 登録日 2017-10-30 公開日 2018-11-14 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural Studies based on two Lysine Dioxygenases with Distinct Regioselectivity Brings Insights Into Enzyme Specificity within the Clavaminate Synthase-Like Family. Sci Rep, 8, 2018
4QTX	Caspase-3 Y195A 分子名称: ACE-ASP-GLU-VAL-ASP-CHLOROMETHYLKETONE INHIBITOR, ACETATE ION, Caspase-3 著者 Cade, C, Swartz, P.D, MacKenzie, S.H, Clark, A.C. 登録日 2014-07-09 公開日 2014-11-05 最終更新日 2017-11-22 実験手法 X-RAY DIFFRACTION (1.974 Å) 主引用文献 Modifying caspase-3 activity by altering allosteric networks. Biochemistry, 53, 2014
6EXH	Crystal structure of the complex Fe(II)/alpha-ketoglutarate dependent dioxygenase KDO5 with Fe(II)/succinate/(4R)-4-hydroxy-L-lysine 分子名称: 4-HYDROXY-LYSINE, FE (III) ION, GLYCEROL, ... 著者 Isabet, T, Stura, E, Legrand, P, Zaparucha, A, Bastard, K. 登録日 2017-11-08 公開日 2018-11-14 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Structural Studies based on two Lysine Dioxygenases with Distinct Regioselectivity Brings Insights Into Enzyme Specificity within the Clavaminate Synthase-Like Family. Sci Rep, 8, 2018
4R1F	Re-refined Human DNA topoisomerase IIa (ATPase and transducer domains) in complex with ADP and SO4 分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA topoisomerase 2-alpha, GLYCEROL, ... 著者 Stanger, F.V, Schirmer, T. 登録日 2014-08-05 公開日 2014-09-24 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.51 Å) 主引用文献 Structure of the N-Terminal Gyrase B Fragment in Complex with ADPPi Reveals Rigid-Body Motion Induced by ATP Hydrolysis Plos One, 9, 2014
7QOA	Structure of CodB, a cytosine transporter in an outward-facing conformation 分子名称: 2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 6-AMINOPYRIMIDIN-2(1H)-ONE, Cytosine permease, ... 著者 Hatton, C.E, Cameron, A.D. 登録日 2021-12-23 公開日 2022-07-13 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structure of cytosine transport protein CodB provides insight into nucleobase-cation symporter 1 mechanism. Embo J., 41, 2022
4R57	Crystal structure of spermidine N-acetyltransferase from Vibrio cholerae in complex with acetyl-CoA 分子名称: ACETYL COENZYME *A, DI(HYDROXYETHYL)ETHER, Spermidine n1-acetyltransferase, ... 著者 Filippova, E.V, Minasov, G, Kiryukhina, O, Shuvalova, L, Kuhn, M.L, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID) 登録日 2014-08-20 公開日 2015-03-25 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.079 Å) 主引用文献 A Novel Polyamine Allosteric Site of SpeG from Vibrio cholerae Is Revealed by Its Dodecameric Structure. J.Mol.Biol., 427, 2015
1U7F	Crystal Structure of the phosphorylated Smad3/Smad4 heterotrimeric complex 分子名称: Mothers against decapentaplegic homolog 3, Mothers against decapentaplegic homolog 4 著者 Chacko, B.M, Qin, B.Y, Tiwari, A, Shi, G, Lam, S, Hayward, L.J, de Caestecker, M, Lin, K. 登録日 2004-08-03 公開日 2004-09-28 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Structural basis of heteromeric smad protein assembly in tgf-Beta signaling Mol.Cell, 15, 2004
2IPB	Crystal structure of T159D mutant of S. Typhimurium PhoN protein 分子名称: Class A nonspecific acid phosphatase PhoN 著者 Makde, R.D, Kumar, V. 登録日 2006-10-12 公開日 2007-03-06 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.23 Å) 主引用文献 Structure and Mutational Analysis of the PhoN Protein of Salmonella typhimurium Provide Insight into Mechanistic Details Biochemistry, 46, 2007
5DD8	The Crystal structure of HucR mutant (HucR-E48Q) from Deinococcus radiodurans 分子名称: CHLORIDE ION, Transcriptional regulator, MarR family 著者 Deochand, D.K, Perera, I.C, Crochet, R.B, Gilbert, N.C, Newcomer, M.E, Grove, A. 登録日 2015-08-24 公開日 2015-09-09 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Histidine switch controlling pH-dependent protein folding and DNA binding in a transcription factor at the core of synthetic network devices. Mol Biosyst, 12, 2016
6ETO	Atomic resolution structure of RNase A (data collection 5) 分子名称: ISOPROPYL ALCOHOL, Ribonuclease pancreatic 著者 Caterino, M, Vergara, A, Merlino, A. 登録日 2017-10-27 公開日 2018-02-21 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.02 Å) 主引用文献 The Alkylquinolone Repertoire of Pseudomonas aeruginosa is Linked to Structural Flexibility of the FabH-like 2-Heptyl-3-hydroxy-4(1H)-quinolone (PQS) Biosynthesis Enzyme PqsBC. Chembiochem, 2018
6ETN	Atomic resolution structure of RNase A (data collection 4) 分子名称: ISOPROPYL ALCOHOL, Ribonuclease pancreatic 著者 Caterino, M, Vergara, A, Merlino, A. 登録日 2017-10-27 公開日 2018-02-21 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (0.92 Å) 主引用文献 Raman-markers of X-ray radiation damage of proteins. Int. J. Biol. Macromol., 111, 2018
6EUR	Crystal structure of the complex Fe(II)/alpha-ketoglutarate dependent dioxygenase KDO5 with Fe(II)/alpha-ketoglutarate 分子名称: 2-OXOGLUTARIC ACID, FE (III) ION, GLYCEROL, ... 著者 Isabet, T, Stura, E, Legrand, P, Zaparucha, A, Bastard, K. 登録日 2017-10-31 公開日 2018-11-14 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural Studies based on two Lysine Dioxygenases with Distinct Regioselectivity Brings Insights Into Enzyme Specificity within the Clavaminate Synthase-Like Family. Sci Rep, 8, 2018
6EZR	Crystal structure of GH20 Exo beta-N-Acetylglucosaminidase from Vibrio harveyi 分子名称: Beta-N-acetylglucosaminidase Nag2 著者 Porfetye, A.T, Meekrathok, P, Burger, M, Vetter, I.R, Suginta, W. 登録日 2017-11-16 公開日 2018-12-12 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.37 Å) 主引用文献 Crystal structure of GH20 Exo beta-N-Acetylglucosaminidase from Vibrio harveyi To Be Published
6F2E	Crystal structure of the APO Fe(II)/alpha-ketoglutarate dependent dioxygenase KDO1 分子名称: ACETIC ACID, L-lysine 3-hydroxylase 著者 Isabet, T, Stura, E.A, Legrand, P, Zaparucha, A, Bastard, K. 登録日 2017-11-24 公開日 2018-11-14 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structural Studies based on two Lysine Dioxygenases with Distinct Regioselectivity Brings Insights Into Enzyme Specificity within the Clavaminate Synthase-Like Family. Sci Rep, 8, 2018
6F39	C1r homodimer CUB1-EGF-CUB2 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Complement C1r subcomponent, ... 著者 Almitairi, J.O.M, Venkatraman Girija, U, Furze, C.M, Simpson-Gray, X, Badakshi, F, Marshall, J.E, Mitchell, D.A, Moody, P.C.E, Wallis, R. 登録日 2017-11-28 公開日 2018-01-24 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (5.801 Å) 主引用文献 Structure of the C1r-C1s interaction of the C1 complex of complement activation. Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6FAN	Crystal structure of putative CooT from Carboxydothermus hydrogenoformans 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CooT, GLYCEROL 著者 Cavazza, C, Alfano, M. 登録日 2017-12-15 公開日 2018-11-28 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Biophysical and structural characterization of the putative nickel chaperone CooT from Carboxydothermus hydrogenoformans. J.Biol.Inorg.Chem., 23, 2018
6F57	Crystal structure of DNMT3A-DNMT3L in complex with single CpG-containing DNA 分子名称: DNA (5'-D(*AP*GP*AP*GP*CP*GP*CP*AP*TP*G)-3'), DNA (5'-D(*CP*AP*TP*GP*ZP*GP*CP*TP*CP*T)-3'), DNA (cytosine-5)-methyltransferase 3-like, ... 著者 Zhang, Z.M, Song, J. 登録日 2017-12-01 公開日 2018-01-31 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (3.098 Å) 主引用文献 Structural basis for DNMT3A-mediated de novo DNA methylation. Nature, 554, 2018
6F6J	Crystal structure of the Fe(II)/alpha-ketoglutarate dependent dioxygenase KDO1 with Fe(II)/succinate/(3S)-3-hydroxy-L-lysine 分子名称: (2~{S},3~{R})-2,6-bis(azanyl)-3-oxidanyl-hexanoic acid, ACETATE ION, FE (III) ION, ... 著者 Isabet, T, Stura, E.A, Legrand, P, Zaparucha, A, Bastard, K. 登録日 2017-12-05 公開日 2018-11-14 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural Studies based on two Lysine Dioxygenases with Distinct Regioselectivity Brings Insights Into Enzyme Specificity within the Clavaminate Synthase-Like Family. Sci Rep, 8, 2018
2YK6	Structure of Neisseria LOS-specific sialyltransferase (NST), in complex with CDP. 分子名称: CMP-N-ACETYLNEURAMINATE-BETA-GALACTOSAMIDE-ALPHA-2,3-SIALYLTRANSFERASE, CYTIDINE-5'-DIPHOSPHATE, PENTAETHYLENE GLYCOL, ... 著者 Lin, L.Y.C, Rakic, B, Chiu, C.P.C, Lameignere, E, Wakarchuk, W.W, Withers, S.G, Strynadka, N.C.J. 登録日 2011-05-25 公開日 2011-08-31 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.83 Å) 主引用文献 Structure and Mechanism of the Lipooligosaccharide Sialyltransferase from Neisseria Meningitidis J.Biol.Chem., 286, 2011
5ABU	Complex of D. melanogaster eIF4E with the 4E-binding protein Mextli and cap analog 分子名称: 4E-BINDING PROTEIN MEXTLI, 7-METHYL-GUANOSINE-5'-TRIPHOSPHATE-5'-GUANOSINE, CHLORIDE ION, ... 著者 Peter, D, Weichenrieder, O. 登録日 2015-08-09 公開日 2015-09-02 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.16 Å) 主引用文献 Mextli Proteins Use Both Canonical Bipartite and Novel Tripartite Binding Modes to Form Eif4E Complexes that Display Differential Sensitivity to 4E-BP Regulation Genes Dev., 29, 2015

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