Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1DQL
DownloadVisualize
BU of 1dql by Molmil
CRYSTAL STRUCTURE OF AN UNLIGANDED (NATIVE) FV FROM A HUMAN IGM ANTI-PEPTIDE ANTIBODY
分子名称: IGM MEZ IMMUNOGLOBULIN
著者Ramsland, P.A, Shan, L, Moomaw, C.R, Slaughter, C.A, Guddat, L.W, Edmundson, A.B.
登録日2000-01-04
公開日2000-10-04
最終更新日2019-12-25
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献An unusual human IgM antibody with a protruding HCDR3 and high avidity for its peptide ligands.
Mol.Immunol., 37, 2000
1XZ5
DownloadVisualize
BU of 1xz5 by Molmil
T-to-THigh Quaternary Transitions in Human Hemoglobin: alphaL91A deoxy low-salt
分子名称: Hemoglobin alpha chain, Hemoglobin beta chain, PROTOPORPHYRIN IX CONTAINING FE
著者Kavanaugh, J.S, Rogers, P.H, Arnone, A.
登録日2004-11-11
公開日2004-12-07
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.11 Å)
主引用文献Crystallographic evidence for a new ensemble of ligand-induced allosteric transitions in hemoglobin: the T-to-T(high) quaternary transitions.
Biochemistry, 44, 2005
8DV1
DownloadVisualize
BU of 8dv1 by Molmil
SARS-CoV-2 Wuhan-hu-1-Spike-RBD bound to linker variant of affinity matured ACE2 mimetic CVD432
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2,Immunoglobulin gamma-1 heavy chain fusion,Immunoglobulin gamma-1 heavy chain, Spike glycoprotein
著者QCRG Structural Biology Consortium, Remesh, S.G, Merz, G.E, Brilot, A.F, Chio, U, Verba, K.A.
登録日2022-07-27
公開日2022-08-31
最終更新日2023-03-15
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Computational pipeline provides mechanistic understanding of Omicron variant of concern neutralizing engineered ACE2 receptor traps.
Structure, 31, 2023
8DV2
DownloadVisualize
BU of 8dv2 by Molmil
SARS-CoV-2 Wuhan-hu-1-Spike-RBD bound to computationally engineered ACE2 mimetic CVD293
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2,Immunoglobulin gamma-1 heavy chain fusion, Spike glycoprotein
著者QCRG Structural Biology Consortium, Remesh, S.G, Merz, G.E, Brilot, A.F, Chio, U, Verba, K.A.
登録日2022-07-27
公開日2022-08-31
最終更新日2023-03-15
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Computational pipeline provides mechanistic understanding of Omicron variant of concern neutralizing engineered ACE2 receptor traps.
Structure, 31, 2023
1XXT
DownloadVisualize
BU of 1xxt by Molmil
The T-to-T High Transitions in Human Hemoglobin: wild-type deoxy Hb A (low salt, one test set)
分子名称: Hemoglobin alpha chain, Hemoglobin beta chain, PROTOPORPHYRIN IX CONTAINING FE
著者Kavanaugh, J.S, Rogers, P.H, Arnone, A.
登録日2004-11-08
公開日2004-12-07
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Crystallographic evidence for a new ensemble of ligand-induced allosteric transitions in hemoglobin: the T-to-T(high) quaternary transitions.
Biochemistry, 44, 2005
1XZ7
DownloadVisualize
BU of 1xz7 by Molmil
T-to-THigh Quaternary Transitions in Human Hemoglobin: alphaR92A deoxy low-salt
分子名称: Hemoglobin alpha chain, Hemoglobin beta chain, PROTOPORPHYRIN IX CONTAINING FE
著者Kavanaugh, J.S, Rogers, P.H, Arnone, A.
登録日2004-11-11
公開日2004-11-30
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystallographic evidence for a new ensemble of ligand-induced allosteric transitions in hemoglobin: the T-to-T(high) quaternary transitions.
Biochemistry, 44, 2005
2OJ5
DownloadVisualize
BU of 2oj5 by Molmil
Crystal Structure of Reovirus T3D Attachment Protein Sigma1 head domain wild-type at 1.75 A resolution
分子名称: GLYCEROL, MAGNESIUM ION, Viral attachment protein sigma 1
著者Stehle, T, Schelling, P, Kirchner, E, Dermody, T.S.
登録日2007-01-12
公開日2007-02-13
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献The Reovirus Sigma1 Aspartic Acid Sandwich: A TRIMERIZATION MOTIF POISED FOR CONFORMATIONAL CHANGE.
J.Biol.Chem., 282, 2007
1IHI
DownloadVisualize
BU of 1ihi by Molmil
Crystal Structure of Human Type III 3-alpha-Hydroxysteroid Dehydrogenase/Bile Acid Binding Protein (AKR1C2) Complexed with NADP+ and Ursodeoxycholate
分子名称: 3-ALPHA-HYDROXYSTEROID DEHYDROGENASE, ISO-URSODEOXYCHOLIC ACID, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Jin, Y, Stayrook, S.E, Albert, R.H, Palackal, N.T, Penning, T.M, Lewis, M.
登録日2001-04-19
公開日2001-10-03
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal structure of human type III 3alpha-hydroxysteroid dehydrogenase/bile acid binding protein complexed with NADP(+) and ursodeoxycholate.
Biochemistry, 40, 2001
3JSC
DownloadVisualize
BU of 3jsc by Molmil
CcdBVfi-FormI-pH7.0
分子名称: CcdB, SULFATE ION
著者De Jonge, N, Buts, L, Loris, R.
登録日2009-09-10
公開日2009-12-01
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural and thermodynamic characterization of vibrio fischeri CCDB
J.Biol.Chem., 285, 2010
8E0Y
DownloadVisualize
BU of 8e0y by Molmil
DAHP (3-deoxy-D-arabinoheptulosonate-7-phosphate) Synthase complexed with DAHP oxime, Pr(III), and Pi in unbound:(bound)2:other Conformations
分子名称: ACETATE ION, CITRATE ANION, DAHP Oxime, ...
著者Berti, P.J, Junop, M.S, Grainger, R.
登録日2022-08-09
公開日2022-10-12
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Role of Half-of-Sites Reactivity and Inter-Subunit Communications in DAHP Synthase Catalysis and Regulation.
Biochemistry, 61, 2022
8E0Z
DownloadVisualize
BU of 8e0z by Molmil
DAHP (3-deoxy-D-arabinoheptulosonate-7-phosphate) Synthase unbound:(bound)2:unbound Conformations
分子名称: CHLORIDE ION, Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive
著者Berti, P.J, Junop, M.S, Grainger, R.
登録日2022-08-09
公開日2022-10-12
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Role of Half-of-Sites Reactivity and Inter-Subunit Communications in DAHP Synthase Catalysis and Regulation.
Biochemistry, 61, 2022
5O90
DownloadVisualize
BU of 5o90 by Molmil
Crystal structure of a P38alpha T185G mutant in complex with TAB1 peptide.
分子名称: 4-(4-FLUOROPHENYL)-1-(4-PIPERIDINYL)-5-(2-AMINO-4-PYRIMIDINYL)-IMIDAZOLE, Mitogen-activated protein kinase 14, TGF-beta-activated kinase 1 and MAP3K7-binding protein 1
著者Nichols, C.E, De Nicola, G.F, Thapa, D.
登録日2017-06-15
公開日2018-01-31
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献TAB1-Induced Autoactivation of p38 alpha Mitogen-Activated Protein Kinase Is Crucially Dependent on Threonine 185.
Mol. Cell. Biol., 38, 2018
8E0V
DownloadVisualize
BU of 8e0v by Molmil
DAHP (3-deoxy-D-arabinoheptulosonate-7-phosphate) Synthase complexed with Mn(II), PEP, and Pi in unbound:(bound)2:other Conformations
分子名称: MANGANESE (II) ION, PHOSPHATE ION, PHOSPHOENOLPYRUVATE, ...
著者Berti, P.J, Junop, M.S, Grainger, R.
登録日2022-08-09
公開日2022-10-12
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Role of Half-of-Sites Reactivity and Inter-Subunit Communications in DAHP Synthase Catalysis and Regulation.
Biochemistry, 61, 2022
8E0U
DownloadVisualize
BU of 8e0u by Molmil
DAHP (3-deoxy-D-arabinoheptulosonate-7-phosphate) Synthase complexed with Sulfate in unbound:(bound)2:other conformations
分子名称: Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive, SULFATE ION
著者Berti, P.J, Junop, M.S, Grainger, R.
登録日2022-08-09
公開日2022-10-12
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.42 Å)
主引用文献Role of Half-of-Sites Reactivity and Inter-Subunit Communications in DAHP Synthase Catalysis and Regulation.
Biochemistry, 61, 2022
8E0X
DownloadVisualize
BU of 8e0x by Molmil
DAHP (3-deoxy-D-arabinoheptulosonate-7-phosphate) Synthase complexed with Mn(II), PEP, and Pi in unbound:(bound)2:other Conformations
分子名称: MANGANESE (II) ION, PHOSPHATE ION, PHOSPHOENOLPYRUVATE, ...
著者Berti, P.J, Junop, M.S, Grainger, R.
登録日2022-08-09
公開日2022-10-12
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Role of Half-of-Sites Reactivity and Inter-Subunit Communications in DAHP Synthase Catalysis and Regulation.
Biochemistry, 61, 2022
8E0T
DownloadVisualize
BU of 8e0t by Molmil
DAHP (3-deoxy-D-arabinoheptulosonate-7-phosphate) Synthase complexed with DAHP Oxime in unbound:(bound)2:other conformations
分子名称: DAHP Oxime, Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive
著者Berti, P.J, Junop, M.S, Grainger, R.
登録日2022-08-09
公開日2022-10-12
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Role of Half-of-Sites Reactivity and Inter-Subunit Communications in DAHP Synthase Catalysis and Regulation.
Biochemistry, 61, 2022
8E0S
DownloadVisualize
BU of 8e0s by Molmil
DAHP (3-deoxy-D-arabinoheptulosonate-7-phosphate) Synthase complexed with DAHP Oxime in unbound:(bound)2:unbound conformations
分子名称: DAHP Oxime, Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive, ...
著者Berti, P.J, Junop, M.S, Grainger, R.
登録日2022-08-09
公開日2022-10-12
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Role of Half-of-Sites Reactivity and Inter-Subunit Communications in DAHP Synthase Catalysis and Regulation.
Biochemistry, 61, 2022
2AKC
DownloadVisualize
BU of 2akc by Molmil
Crystal structure of tungstate complex of the PhoN protein from S. typhimurium
分子名称: TUNGSTATE(VI)ION, class A nonspecific acid phosphatase PhoN
著者Makde, R.D, Kumar, V.
登録日2005-08-03
公開日2006-05-23
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure and Mutational Analysis of the PhoN Protein of Salmonella typhimurium Provide Insight into Mechanistic Details.
Biochemistry, 46, 2007
3US3
DownloadVisualize
BU of 3us3 by Molmil
Recombinant rabbit skeletal calsequestrin-MPD complex
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, ...
著者Sanchez, E.J, Lewis, K.M, Nissen, M.S, Munske, G.R, Kang, C.
登録日2011-11-22
公開日2011-12-21
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.738 Å)
主引用文献Glycosylation of skeletal calsequestrin: implications for its function.
J.Biol.Chem., 287, 2012
3UZO
DownloadVisualize
BU of 3uzo by Molmil
Crystal Structures of Branched-Chain Aminotransferase from Deinococcus radiodurans Complexes with alpha-Ketoisocaproate and L-Glutamate Suggest Its Radio-Resistance for Catalysis
分子名称: Branched-chain-amino-acid aminotransferase, GLUTAMIC ACID, PYRIDOXAL-5'-PHOSPHATE
著者Chen, C.D, Huang, Y.C, Chuankhayan, P, Hsieh, Y.C, Huang, T.F, Lin, C.H, Guan, H.H, Liu, M.Y, Chang, W.C, Chen, C.J.
登録日2011-12-07
公開日2012-12-12
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structures of Complexes of the Branched-Chain Aminotransferase from Deinococcus radiodurans with alpha-Ketoisocaproate and L-Glutamate Suggest the Radiation Resistance of This Enzyme for Catalysis
J.Bacteriol., 194, 2012
3V3B
DownloadVisualize
BU of 3v3b by Molmil
Structure of the Stapled p53 Peptide Bound to Mdm2
分子名称: CHLORIDE ION, E3 ubiquitin-protein ligase Mdm2, SAH-p53-8 stapled-peptide
著者Baek, S, Kutchukian, P.S, Verdine, G.L, Huber, R, Holak, T.A, Ki Won, L, Popowicz, G.M.
登録日2011-12-13
公開日2012-01-18
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of the stapled p53 peptide bound to Mdm2.
J.Am.Chem.Soc., 134, 2012
6GIR
DownloadVisualize
BU of 6gir by Molmil
Arabidopsis thaliana cytosolic seryl-tRNA synthetase
分子名称: Serine--tRNA ligase, cytoplasmic
著者Kekez, I, Kekez, M, Rokov-Plavec, J, Matkovic-Calogovic, D.
登録日2018-05-15
公開日2019-01-02
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.343 Å)
主引用文献Arabidopsis seryl-tRNA synthetase: the first crystal structure and novel protein interactor of plant aminoacyl-tRNA synthetase.
FEBS J., 286, 2019
8E18
DownloadVisualize
BU of 8e18 by Molmil
Crystal structure of apo TnmK1
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Secreted hydrolase
著者Liu, Y.-C, Gui, C, Shen, B.
登録日2022-08-10
公開日2022-11-09
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.14 Å)
主引用文献Intramolecular C-C Bond Formation Links Anthraquinone and Enediyne Scaffolds in Tiancimycin Biosynthesis.
J.Am.Chem.Soc., 144, 2022
3V4P
DownloadVisualize
BU of 3v4p by Molmil
crystal structure of a4b7 headpiece complexed with Fab ACT-1
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Yu, Y, Zhu, J, Springer, T.A.
登録日2011-12-15
公開日2012-01-11
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献Structural specializations of a4b7, an Integrin that Mediates Rolling Adhesion
J.Cell Biol., 196, 2012
3UZB
DownloadVisualize
BU of 3uzb by Molmil
Crystal Structures of Branched-Chain Aminotransferase from Deinococcus radiodurans Complexes with alpha-Ketoisocaproate and L-Glutamate Suggest Its Radio-Resistance for Catalysis
分子名称: 2-OXO-4-METHYLPENTANOIC ACID, Branched-chain-amino-acid aminotransferase, PYRIDOXAL-5'-PHOSPHATE
著者Chen, C.D, Huang, Y.C, Chuankhayan, P, Hsieh, Y.C, Huang, T.F, Lin, C.H, Guan, H.H, Liu, M.Y, Chang, W.C, Chen, C.J.
登録日2011-12-07
公開日2012-12-12
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal Structures of Complexes of the Branched-Chain Aminotransferase from Deinococcus radiodurans with alpha-Ketoisocaproate and L-Glutamate Suggest the Radiation Resistance of This Enzyme for Catalysis
J.Bacteriol., 194, 2012

222415

件を2024-07-10に公開中

PDB statisticsPDBj update infoContact PDBjnumon