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8UUM
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Prototypic SARS-CoV-2 spike (containing K417) in the open conformation
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, alpha-D-mannopyranose, ...
著者Geng, Q, Liu, B, Li, F.
登録日2023-11-01
公開日2023-11-29
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Lys417 acts as a molecular switch that regulates the conformation of SARS-CoV-2 spike protein.
Elife, 12, 2023
8UUN
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BU of 8uun by Molmil
Prototypic SARS-CoV-2 spike (containing V417) in the closed conformation
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
著者Geng, Q, Liu, B, Li, F.
登録日2023-11-01
公開日2023-11-29
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Lys417 acts as a molecular switch that regulates the conformation of SARS-CoV-2 spike protein.
Elife, 12, 2023
8UUO
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Prototypic SARS-CoV-2 spike (containing V417) in the open conformation
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, alpha-D-mannopyranose, ...
著者Geng, Q, Liu, B, Li, F.
登録日2023-11-01
公開日2023-11-29
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Lys417 acts as a molecular switch that regulates the conformation of SARS-CoV-2 spike protein.
Elife, 12, 2023
8USS
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IL17A complexed to Compound 7
分子名称: 4,5-dichloro-N-[(1S)-1-cyclohexyl-2-{[(3S)-5-methyl-4-oxo-2,3,4,5-tetrahydro-1,5-benzoxazepin-3-yl]amino}-2-oxoethyl]-1H-pyrrole-2-carboxamide, CHLORIDE ION, Interleukin-17A
著者Argiriadi, M.A, Ramos, A.L.
登録日2023-10-29
公開日2024-04-03
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献Discovery of Small Molecule Interleukin 17A Inhibitors with Novel Binding Mode and Stoichiometry: Optimization of DNA-Encoded Chemical Library Hits to In Vivo Active Compounds.
J.Med.Chem., 67, 2024
8USR
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BU of 8usr by Molmil
IL17A homodimer complexed to Compound 23
分子名称: Interleukin-17A, ~{N}-[(2~{S})-1-[[(1~{S})-1-(8~{a}~{H}-imidazo[1,2-a]pyrimidin-2-yl)ethyl]amino]-1-oxidanylidene-4-phenyl-butan-2-yl]-4,5-bis(chloranyl)-1~{H}-pyrrole-2-carboxamide
著者Argiriadi, M.A, Ramos, A.L.
登録日2023-10-29
公開日2024-04-03
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Discovery of Small Molecule Interleukin 17A Inhibitors with Novel Binding Mode and Stoichiometry: Optimization of DNA-Encoded Chemical Library Hits to In Vivo Active Compounds.
J.Med.Chem., 67, 2024
8QRH
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BU of 8qrh by Molmil
Inactivated tick-borne encephalitis virus (TBEV) vaccine strain Sofjin-Chumakov
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Genome polyprotein, Small envelope protein M
著者Moiseenko, A.V, Zhang, Y, Vorovitch, M, Ivanova, A, Liu, Z, Osolodkin, D.I, Egorov, A, Ishmukhametov, A, Sokolova, O.S.
登録日2023-10-07
公開日2024-06-05
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献The structure of inactivated mature tick-borne encephalitis virus at 3.0 angstrom resolution.
Emerg Microbes Infect, 13, 2024
8VGT
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Structure of the HKU1 RBD bound to the human TMPRSS2 receptor
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike protein S1, ...
著者Park, Y.J, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler, D.
登録日2023-12-27
公開日2024-03-06
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Human coronavirus HKU1 recognition of the TMPRSS2 host receptor.
Cell, 2024
8FG6
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Design of amyloidogenic peptide traps
分子名称: C104.1, amyloidogenic peptide
著者Sahtoe, D.D, Bera, A.K, Baker, D.
登録日2022-12-12
公開日2024-03-20
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Design of amyloidogenic peptide traps.
Nat.Chem.Biol., 2024
6ANY
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BU of 6any by Molmil
Structure of BmVAL-1
分子名称: Bm4233, isoform b, SULFATE ION, ...
著者Asojo, O.A.
登録日2017-08-14
公開日2018-03-28
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Crystal structure of Brugia malayi venom allergen-like protein-1 (BmVAL-1), a vaccine candidate for lymphatic filariasis.
Int. J. Parasitol., 48, 2018
8R8L
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BU of 8r8l by Molmil
The structure of inactivated mature tick-borne encephalitis virus
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Peptide 2k
著者Pichkur, E.B, Samygina, V.R.
登録日2023-11-29
公開日2024-05-22
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.03 Å)
主引用文献The structure of inactivated mature tick-borne encephalitis virus at 3.0 angstrom resolution.
Emerg Microbes Infect, 13, 2024
7FH0
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Crystallographic structure of two neutralizing nanobodies in complex with SARS-CoV-2 spike receptor-binding Domain (RBD)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, DI(HYDROXYETHYL)ETHER, ...
著者Zheng, P, Jin, J.
登録日2021-07-28
公開日2022-08-03
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Hetero-bivalent nanobodies provide broad-spectrum protection against SARS-CoV-2 variants of concern including Omicron.
Cell Res., 32, 2022
7FD2
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BU of 7fd2 by Molmil
Cryo-EM structure of an alphavirus, Getah virus
分子名称: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Liu, Z, Liu, C, Wang, A.
登録日2021-07-15
公開日2022-08-10
実験手法ELECTRON MICROSCOPY (2.81 Å)
主引用文献Structure of infective Getah virus at 2.8 angstrom resolution determined by cryo-electron microscopy.
Cell Discov, 8, 2022
7FAB
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CRYSTAL STRUCTURE OF HUMAN IMMUNOGLOBULIN FRAGMENT FAB NEW REFINED AT 2.0 ANGSTROMS RESOLUTION
分子名称: IGG1-LAMBDA NEW FAB (HEAVY CHAIN), IGG1-LAMBDA NEW FAB (LIGHT CHAIN)
著者Saul, F, Poljak, R.J.
登録日1991-11-20
公開日1994-01-31
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of human immunoglobulin fragment Fab New refined at 2.0 A resolution.
Proteins, 14, 1992
8V9A
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BU of 8v9a by Molmil
GII.NA1 Loreto 1257 norovirus protruding domain
分子名称: 1,2-ETHANEDIOL, Capsid protein VP1
著者Kher, G, Kim, I, Pancera, M, Hansman, G.
登録日2023-12-07
公開日2024-06-19
最終更新日2024-07-31
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献Development of a broad-spectrum therapeutic Fc-nanobody for human noroviruses.
J.Virol., 98, 2024
8V96
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GII.14 M7 norovirus protruding domain
分子名称: 1,2-ETHANEDIOL, Capsid protein VP1
著者Kher, G, Prewitt, A, Pancera, M, Hansman, G.
登録日2023-12-07
公開日2024-06-19
最終更新日2024-07-31
実験手法X-RAY DIFFRACTION (1.44 Å)
主引用文献Development of a broad-spectrum therapeutic Fc-nanobody for human noroviruses.
J.Virol., 98, 2024
8V98
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GII.24 Loreto 1972 norovirus protruding domain
分子名称: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Capsid protein VP1
著者Kher, G, Prewitt, A, Pancera, M, Hansman, G.
登録日2023-12-07
公開日2024-06-19
最終更新日2024-07-31
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Development of a broad-spectrum therapeutic Fc-nanobody for human noroviruses.
J.Virol., 98, 2024
8V95
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GII.8 Amsterdam norovirus protruding domain
分子名称: 1,2-ETHANEDIOL, Capsid protein (Fragment)
著者Kher, G, Prewitt, A, Pancera, M, Hansman, G.
登録日2023-12-07
公開日2024-06-19
最終更新日2024-07-31
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Development of a broad-spectrum therapeutic Fc-nanobody for human noroviruses.
J.Virol., 98, 2024
6C98
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Crystal structure of FcRn bound to UCB-84
分子名称: 1-[7-(3-fluorophenyl)-5-methyl[1,2,4]triazolo[1,5-a]pyrimidin-6-yl]ethan-1-one, Beta-2-microglobulin, CYSTEINE, ...
著者Fox III, D, Lukacs, C.M.
登録日2018-01-25
公開日2018-05-30
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Insight into small molecule binding to the neonatal Fc receptor by X-ray crystallography and 100 kHz magic-angle-spinning NMR.
PLoS Biol., 16, 2018
8V99
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GII.26 Leon 4509 norovirus protruding domain
分子名称: 1,2-ETHANEDIOL, ACETATE ION, Capsid protein VP1, ...
著者Kher, G, Reese, T, Pancera, M, Hansman, G.
登録日2023-12-07
公開日2024-06-19
最終更新日2024-07-31
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献Development of a broad-spectrum therapeutic Fc-nanobody for human noroviruses.
J.Virol., 98, 2024
8V97
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GII.17 CS-E1 norovirus protruding domain
分子名称: 1,2-ETHANEDIOL, Capsid protein VP1, DI(HYDROXYETHYL)ETHER
著者Kher, G, Prewitt, A, Pancera, M, Hansman, G.
登録日2023-12-07
公開日2024-06-19
最終更新日2024-07-31
実験手法X-RAY DIFFRACTION (1.27 Å)
主引用文献Development of a broad-spectrum therapeutic Fc-nanobody for human noroviruses.
J.Virol., 98, 2024
6DBK
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Tyk2 with compound 8
分子名称: 4-({4-[(1S,4S)-5-(cyanoacetyl)-2,5-diazabicyclo[2.2.1]heptan-2-yl]pyrimidin-2-yl}amino)-N-ethylbenzamide, Non-receptor tyrosine-protein kinase TYK2
著者Vajdos, F.F.
登録日2018-05-03
公開日2018-08-29
最終更新日2018-11-07
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Dual Inhibition of TYK2 and JAK1 for the Treatment of Autoimmune Diseases: Discovery of (( S)-2,2-Difluorocyclopropyl)((1 R,5 S)-3-(2-((1-methyl-1 H-pyrazol-4-yl)amino)pyrimidin-4-yl)-3,8-diazabicyclo[3.2.1]octan-8-yl)methanone (PF-06700841).
J. Med. Chem., 61, 2018
6DBM
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Tyk2 with compound 23
分子名称: Non-receptor tyrosine-protein kinase TYK2, [(1S)-2,2-difluorocyclopropyl][(1R,5S)-3-{2-[(1-methyl-1H-pyrazol-4-yl)amino]pyrimidin-4-yl}-3,8-diazabicyclo[3.2.1]octan-8-yl]methanone
著者Vajdos, F.F.
登録日2018-05-03
公開日2018-08-29
最終更新日2018-11-07
実験手法X-RAY DIFFRACTION (2.368 Å)
主引用文献Dual Inhibition of TYK2 and JAK1 for the Treatment of Autoimmune Diseases: Discovery of (( S)-2,2-Difluorocyclopropyl)((1 R,5 S)-3-(2-((1-methyl-1 H-pyrazol-4-yl)amino)pyrimidin-4-yl)-3,8-diazabicyclo[3.2.1]octan-8-yl)methanone (PF-06700841).
J. Med. Chem., 61, 2018
6DBN
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Jak1 with compound 23
分子名称: Tyrosine-protein kinase JAK1, [(1S)-2,2-difluorocyclopropyl][(1R,5S)-3-{2-[(1-methyl-1H-pyrazol-4-yl)amino]pyrimidin-4-yl}-3,8-diazabicyclo[3.2.1]octan-8-yl]methanone
著者Vajdos, F.F.
登録日2018-05-03
公開日2018-08-29
最終更新日2018-11-07
実験手法X-RAY DIFFRACTION (2.48 Å)
主引用文献Dual Inhibition of TYK2 and JAK1 for the Treatment of Autoimmune Diseases: Discovery of (( S)-2,2-Difluorocyclopropyl)((1 R,5 S)-3-(2-((1-methyl-1 H-pyrazol-4-yl)amino)pyrimidin-4-yl)-3,8-diazabicyclo[3.2.1]octan-8-yl)methanone (PF-06700841).
J. Med. Chem., 61, 2018
7JPI
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Crystal structure of EBOV glycoprotein with modified HR2 stalk at 2.3A resolution
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein, ...
著者Chaudhary, A, Stanfield, R.L, Wilson, I.A, Zhu, J.
登録日2020-08-08
公開日2021-04-07
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Single-component multilayered self-assembling nanoparticles presenting rationally designed glycoprotein trimers as Ebola virus vaccines.
Nat Commun, 12, 2021
7JPH
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Crystal structure of EBOV glycoprotein with modified HR1c and HR2 stalk at 3.2 A resolution
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein, ...
著者Chaudhary, A, Stanfield, R.L, Wilson, I.A, Zhu, J.
登録日2020-08-08
公開日2021-04-07
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.195 Å)
主引用文献Single-component multilayered self-assembling nanoparticles presenting rationally designed glycoprotein trimers as Ebola virus vaccines.
Nat Commun, 12, 2021

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件を2024-07-31に公開中

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