PDB: 19255 件ウェブページステータス検索Chemie searchBIRD

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8FWB	Portal assembly of Agrobacterium phage Milano 分子名称: Portal protein, gp7 著者 Sonani, R.R, Wang, F, Esteves, N.C, Kelly, R.J, Sebastian, A, Kreutzberger, M.A.B, Leiman, P.G, Scharf, B.E, Egelman, E.H. 登録日 2023-01-20 公開日 2023-12-06 実験手法 ELECTRON MICROSCOPY (3.14 Å) 主引用文献 Neck and capsid architecture of the robust Agrobacterium phage Milano. Commun Biol, 6, 2023
6FJ9	Structure of Thaumatin collected from an in situ crystal on ID30B at 17.5 keV. 分子名称: L(+)-TARTARIC ACID, Thaumatin-1 著者 McCarthy, A.A, Mueller-Dieckmann, C. 登録日 2018-01-21 公開日 2018-01-31 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 ID30B - a versatile beamline for macromolecular crystallography experiments at the ESRF. J Synchrotron Radiat, 25, 2018
8FWG	Structure of neck and portal vertex of Agrobacterium phage Milano, C5 symmetry 分子名称: Collar sheath protein, gp13, Linking protein 1, ... 著者 Sonani, R.R, Wang, F, Esteves, N.C, Kelly, R.J, Sebastian, A, Kreutzberger, M.A.B, Leiman, P.G, Scharf, B.E, Egelman, E.H. 登録日 2023-01-22 公開日 2023-12-06 実験手法 ELECTRON MICROSCOPY (3.45 Å) 主引用文献 Neck and capsid architecture of the robust Agrobacterium phage Milano. Commun Biol, 6, 2023
8FWC	Collar sheath structure of Agrobacterium phage Milano 分子名称: Collar sheath protein, gp13 著者 Sonani, R.R, Wang, F, Esteves, N.C, Kelly, R.J, Sebastian, A, Kreutzberger, M.A.B, Leiman, P.G, Scharf, B.E, Egelman, E.H. 登録日 2023-01-20 公開日 2023-12-06 実験手法 ELECTRON MICROSCOPY (2.96 Å) 主引用文献 Neck and capsid architecture of the robust Agrobacterium phage Milano. Commun Biol, 6, 2023
8FWE	Neck structure of Agrobacterium phage Milano, C3 symmetry 分子名称: Collar sheath protein, gp13, Neck 1 protein, ... 著者 Sonani, R.R, Wang, F, Esteves, N.C, Kelly, R.J, Sebastian, A, Kreutzberger, M.A.B, Leiman, P.G, Scharf, B.E, Egelman, E.H. 登録日 2023-01-21 公開日 2023-12-06 実験手法 ELECTRON MICROSCOPY (3.46 Å) 主引用文献 Neck and capsid architecture of the robust Agrobacterium phage Milano. Commun Biol, 6, 2023
8FHS	Human L-type voltage-gated calcium channel Cav1.2 in the presence of amiodarone and sofosbuvir at 3.3 Angstrom resolution 分子名称: (2-butyl-1-benzofuran-3-yl){4-[2-(diethylamino)ethoxy]-3,5-diiodophenyl}methanone, 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Gao, S, Yao, X, Yan, N. 登録日 2022-12-15 公開日 2023-12-13 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Structural basis for human Ca v 1.2 inhibition by multiple drugs and the neurotoxin calciseptine. Cell, 186, 2023
6ET9	Structure of the acetoacetyl-CoA-thiolase/HMG-CoA-synthase complex from Methanothermococcus thermolithotrophicus at 2.75 A 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Acetyl-CoA acetyltransferase thiolase, CHLORIDE ION, ... 著者 Engilberge, S, Voegeli, B, Girard, E, Riobe, F, Maury, O, Erb, T.J, Shima, S, Wagner, T. 登録日 2017-10-25 公開日 2018-03-14 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.75 Å) 主引用文献 Archaeal acetoacetyl-CoA thiolase/HMG-CoA synthase complex channels the intermediate via a fused CoA-binding site. Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6EYC	Re-refinement of the MCM2-7 double hexamer using ISOLDE 分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA replication licensing factor MCM2, DNA replication licensing factor MCM3, ... 著者 Croll, T.I. 登録日 2017-11-11 公開日 2018-06-20 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 ISOLDE: a physically realistic environment for model building into low-resolution electron-density maps. Acta Crystallogr D Struct Biol, 74, 2018
2MPV	Structural insight into host recognition and biofilm formation by aggregative adherence fimbriae of enteroaggregative Esherichia coli 分子名称: Major fimbrial subunit of aggregative adherence fimbria II AafA 著者 Matthews, S.J, Yang, Y, Berry, A.A, Pakharukova, N, Garnett, J.A, Lee, W, Cota, E, Liu, B, Roy, S, Tuittila, M, Marchant, J, Inman, K.G, Ruiz-Perez, F, Mandomando, I, Nataro, J.P, Zavialov, A.V. 登録日 2014-06-04 公開日 2014-10-29 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Structural insight into host recognition by aggregative adherence fimbriae of enteroaggregative Escherichia coli. Plos Pathog., 10, 2014
2N7E	Solution structure of the UBL domain of yeast Ddi1 分子名称: DNA damage-inducible protein 1 著者 Siva, M, Grantz Saskova, K, Veverka, V. 登録日 2015-09-09 公開日 2016-07-20 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Structural studies of the yeast DNA damage-inducible protein Ddi1 reveal domain architecture of this eukaryotic protein family. Sci Rep, 6, 2016
2MQS	Transient Collagen Triple Helix Binding to a Key Metalloproteinase in Invasion and Development: Spin Labels to Structure 分子名称: Matrix metalloproteinase-14, THP_L_and_M_chain, THP_T_chain 著者 Zhao, Y, Marcink, T, Van Doren, S.R. 登録日 2014-06-26 公開日 2015-02-11 最終更新日 2023-06-14 実験手法 SOLUTION NMR 主引用文献 Transient collagen triple helix binding to a key metalloproteinase in invasion and development. Structure, 23, 2015
8IK0	Cryo-EM structure of Stimulator of interferon genes 分子名称: Stimulator of interferon genes protein,Immune protein Tsi3 著者 Lu, D.F, Shang, G.J. 登録日 2023-02-28 公開日 2023-05-17 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 The mechanism of STING autoinhibition and activation. Mol.Cell, 83, 2023
8I7V	Cryo-EM structure of Acipimox bound human hydroxy-carboxylic acid receptor 2 in complex with Gi heterotrimer 分子名称: 5-methyl-4-oxidanyl-pyrazin-4-ium-2-carboxylic acid, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ... 著者 Park, J.H, Ishimoto, N, Park, S.Y. 登録日 2023-02-02 公開日 2024-02-07 実験手法 ELECTRON MICROSCOPY (2.77 Å) 主引用文献 Structural basis for ligand recognition and signaling of hydroxy-carboxylic acid receptor 2. Nat Commun, 14, 2023
6FJ4	Structure of FAE solved by SAD from data collected at the peak of the Selenium absorption edge on ID30B 分子名称: CADMIUM ION, Endo-1,4-beta-xylanase Y, GLYCEROL, ... 著者 McCarthy, A.A, Mueller-Dieckmann, C. 登録日 2018-01-19 公開日 2018-02-07 最終更新日 2018-08-08 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 ID30B - a versatile beamline for macromolecular crystallography experiments at the ESRF. J Synchrotron Radiat, 25, 2018
2NCS	NMR assignment and structure of a peptide derived from the membrane proximal external region of HIV-1 gp41 in the presence of dodecylphosphocholine micelles 分子名称: Envelope glycoprotein gp41 著者 Jimenez, M, Nieva, J.L, Rujas, E, Partida-Hanon, A, Bruix, M. 登録日 2016-04-14 公開日 2017-02-22 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Structural basis for broad neutralization of HIV-1 through the molecular recognition of 10E8 helical epitope at the membrane interface. Sci Rep, 6, 2016
6FJB	Crystal structure of ERK2 in complex with an adenosine derivative 分子名称: 5'-O-prop-2-yn-1-yladenosine, Mitogen-activated protein kinase 1, SULFATE ION 著者 Gelin, M, Labesse, G. 登録日 2018-01-22 公開日 2019-02-06 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Crystal structure of ERK2 in complex with an adenosine derivative To be published
5N3T	cAMP-dependent Protein Kinase A from Cricetulus griseus in complex with fragment like molecule 5-Chlorothiophene-2-sulfonamide 分子名称: 5-chloranylthiophene-2-sulfonamide, DIMETHYL SULFOXIDE, cAMP-dependent protein kinase catalytic subunit alpha 著者 Siefker, C, Heine, A, Klebe, G. 登録日 2017-02-08 公開日 2018-02-28 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.209 Å) 主引用文献 A crystallographic fragment study with cAMP-dependent protein kinase A To Be Published
5N7P	cAMP-dependent Protein Kinase A from Cricetulus griseus in complex with fragment like molecule 3-amino-5-(pyrrolidin-1-yl)-1H-pyrazole-4-carbonitrile 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 5-azanyl-3-pyrrolidin-1-yl-1~{H}-pyrazole-4-carbonitrile, cAMP dependent protein kinase inhibitor alpha-like protein, ... 著者 Siefker, C, Heine, A, Klebe, G. 登録日 2017-02-21 公開日 2018-03-14 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.501 Å) 主引用文献 A crystallographic fragment study with cAMP-dependent protein kinase A To be published
6EVU	Adhesin domain of PrgB from Enterococcus faecalis 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, PHOSPHATE ION, PrgB 著者 Schmitt, A, Berntsson, R.P.A. 登録日 2017-11-02 公開日 2018-05-16 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.598 Å) 主引用文献 PrgB promotes aggregation, biofilm formation, and conjugation through DNA binding and compaction. Mol. Microbiol., 109, 2018
8FP4	GluA2 flip Q isoform of AMPA receptor in complex with gain-of-function TARP gamma-2, with 500mM NaCl, 330uM CTZ, and 100mM glutamate (Open-Na610) 分子名称: CHLORIDE ION, Glutamate receptor 2, Voltage-dependent calcium channel gamma-2 subunit 著者 Nakagawa, T. 登録日 2023-01-04 公開日 2024-02-28 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (2.4 Å) 主引用文献 The open gate of the AMPA receptor forms a Ca 2+ binding site critical in regulating ion transport. Nat.Struct.Mol.Biol., 31, 2024
8FQ5	GluA2 flip Q isoform of AMPA receptor in complex with gain-of-function TARP gamma2, with 140mM NMDG, 330uM CTZ, and 100mM L-glutamate (Open-Na110) 分子名称: CHLORIDE ION, Glutamate receptor 2, Voltage-dependent calcium channel gamma-2 subunit 著者 Nakagawa, T. 登録日 2023-01-05 公開日 2024-02-28 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (2.34 Å) 主引用文献 The open gate of the AMPA receptor forms a Ca 2+ binding site critical in regulating ion transport. Nat.Struct.Mol.Biol., 31, 2024
8FP9	GluA2 flip Q isoform of AMPA receptor in complex with gain-of-function TARP gamma-2, with 10mM CaCl2, 150mM NaCl, 1mM MgCl2, 330uM CTZ, and 100mM glutamate (Open-CaNaMg) 分子名称: CALCIUM ION, CHLORIDE ION, Glutamate receptor 2, ... 著者 Nakagawa, T. 登録日 2023-01-04 公開日 2024-02-28 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (2.44 Å) 主引用文献 The open gate of the AMPA receptor forms a Ca 2+ binding site critical in regulating ion transport. Nat.Struct.Mol.Biol., 31, 2024
8FQF	GluA2 flip Q isoform of AMPA receptor in complex with gain-of-function TARP gamma-2, with 150mM NaCl, 330uM CTZ, and 100mM glutamate (Open-Na260) 分子名称: CHLORIDE ION, Glutamate receptor 2, Voltage-dependent calcium channel gamma-2 subunit 著者 Nakagawa, T. 登録日 2023-01-06 公開日 2024-02-28 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (2.29 Å) 主引用文献 The open gate of the AMPA receptor forms a Ca 2+ binding site critical in regulating ion transport. Nat.Struct.Mol.Biol., 31, 2024
8FQB	GluA2 flip Q isoform of AMPA receptor in complex with gain-of-function TARP gamma2, with 10mM CaCl2, 140mM NMDG, 330uM CTZ, and 100mM L-glutamate (Open-Ca10) 分子名称: CALCIUM ION, CHLORIDE ION, Glutamate receptor 2, ... 著者 Nakagawa, T. 登録日 2023-01-05 公開日 2024-02-28 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (2.36 Å) 主引用文献 The open gate of the AMPA receptor forms a Ca 2+ binding site critical in regulating ion transport. Nat.Struct.Mol.Biol., 31, 2024
8FPG	GluA2 flip Q isoform of AMPA receptor in complex with gain-of-function TARP gamma-2, with 10mM CaCl2, 150mM NaCl, 1mM MgCl2, 330uM CTZ, and 100uM CNQX (Closed-CaNaMg) 分子名称: CHLORIDE ION, Glutamate receptor 2, Voltage-dependent calcium channel gamma-2 subunit 著者 Nakagawa, T. 登録日 2023-01-04 公開日 2024-02-28 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (2.32 Å) 主引用文献 The open gate of the AMPA receptor forms a Ca 2+ binding site critical in regulating ion transport. Nat.Struct.Mol.Biol., 31, 2024

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