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8DTU
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BU of 8dtu by Molmil
The complex of nanobody 5344N74D with BCL11A ZF6.
分子名称: B-cell lymphoma/leukemia 11A, Nanobody 5344N74D, ZINC ION
著者Yin, M, Tenglin, K, Zhai, L, Dassama, L.M, Orkin, S.H.
登録日2022-07-26
公開日2023-02-01
実験手法X-RAY DIFFRACTION (2.447 Å)
主引用文献Evolution of nanobodies specific for BCL11A.
Proc.Natl.Acad.Sci.USA, 120, 2023
8E15
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BU of 8e15 by Molmil
A computationally stabilized hMPV F protein
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, F1 protein with Fibritin peptide, F2 protein, ...
著者Huang, J, Gonzalez, K, Mousa, J, Strauch, E.
登録日2022-08-09
公開日2023-04-12
最終更新日2024-07-24
実験手法X-RAY DIFFRACTION (2.41 Å)
主引用文献A general computational design strategy for stabilizing viral class I fusion proteins.
Nat Commun, 15, 2024
6ALK
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BU of 6alk by Molmil
NMR solution structure of the major beech pollen allergen Fag s 1
分子名称: Fag s 1 pollen allergen
著者Moraes, A.H, Asam, A, Almeida, F.C.L, Wallner, M, Ferreira, F, Valente, A.P.
登録日2017-08-08
公開日2018-08-08
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural basis for cross-reactivity and conformation fluctuation of the major beech pollen allergen Fag s 1.
Sci Rep, 8, 2018
7EA6
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BU of 7ea6 by Molmil
Crystal structure of TCR-017 ectodomain
分子名称: T cell receptor 017 alpha chain, T cell receptor 017 beta chain
著者Nagae, M, Yamasaki, S.
登録日2021-03-06
公開日2021-10-13
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.18000245 Å)
主引用文献Identification of conserved SARS-CoV-2 spike epitopes that expand public cTfh clonotypes in mild COVID-19 patients.
J.Exp.Med., 218, 2021
6B3O
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BU of 6b3o by Molmil
Tectonic conformational changes of a coronavirus spike glycoprotein promote membrane fusion
分子名称: Spike glycoprotein
著者Walls, A.C, Tortorici, M.A, Snijder, J, Xiong, X, Bosch, B.J, Rey, F.A, Veesler, D.
登録日2017-09-22
公開日2017-10-04
最終更新日2020-01-01
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Tectonic conformational changes of a coronavirus spike glycoprotein promote membrane fusion.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
6B40
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BU of 6b40 by Molmil
BbRAGL-3'TIR synaptic complex with nicked DNA refined with C2 symmetry
分子名称: 31TIR intact strand, 31TIR pre-nicked strand of flanking DNA, 31TIR pre-nicked strand of signal DNA, ...
著者Zhang, Y, Cheng, T.C, Xiong, Y, Schatz, D.G.
登録日2017-09-25
公開日2019-03-20
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Transposon molecular domestication and the evolution of the RAG recombinase.
Nature, 569, 2019
8F8V
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BU of 8f8v by Molmil
Crystal structure of Nb.X0
分子名称: Nb.X0
著者Goldgur, Y, Ravetch, J, Gupta, A, Kao, K, Andi, B.
登録日2022-11-22
公開日2023-03-29
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Mechanism of glycoform specificity and in vivo protection by an anti-afucosylated IgG nanobody.
Nat Commun, 14, 2023
8F8W
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Crystal structure of Nb.X0 bound to the afucosylated human IgG1 fragment crystal form I
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Nb.X0, afucosylated IgG1 fragment
著者Goldgur, Y, Ravetch, J, Gupta, A, Kao, K, Oren, D.
登録日2022-11-22
公開日2023-03-29
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.71 Å)
主引用文献Mechanism of glycoform specificity and in vivo protection by an anti-afucosylated IgG nanobody.
Nat Commun, 14, 2023
8F8X
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BU of 8f8x by Molmil
Crystal structure of Nb.X0 bound to the afucosylated human IgG1 fragment crystal form II
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Nb.X0, Uncharacterized protein DKFZp686C11235
著者Goldgur, Y, Ravetch, J, Gupta, A, Kao, K, Oren, D.
登録日2022-11-22
公開日2023-03-29
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Mechanism of glycoform specificity and in vivo protection by an anti-afucosylated IgG nanobody.
Nat Commun, 14, 2023
8TEX
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BU of 8tex by Molmil
Avian Adeno-associated virus - empty capsid
分子名称: Capsid protein
著者Hsi, J, Mietzsch, M, Chipman, P, Afione, S, Zeher, A, Huang, R, Chiorini, J, McKenna, R.
登録日2023-07-07
公開日2023-08-30
最終更新日2023-11-08
実験手法ELECTRON MICROSCOPY (2.54 Å)
主引用文献Structural and antigenic characterization of the avian adeno-associated virus capsid.
J.Virol., 97, 2023
8TEY
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BU of 8tey by Molmil
Avian Adeno-associated virus - empty capsid
分子名称: 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE, Capsid protein
著者Hsi, J, Mietzsch, M, Chipman, P, Afione, S, Zeher, A, Huang, R, Chiorini, J, McKenna, R.
登録日2023-07-07
公開日2023-08-30
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.06 Å)
主引用文献Structural and antigenic characterization of the avian adeno-associated virus capsid.
J.Virol., 97, 2023
6C97
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BU of 6c97 by Molmil
Crystal structure of FcRn at pH3
分子名称: Beta-2-microglobulin, GLYCEROL, IgG receptor FcRn large subunit p51
著者Fox III, D, Fairman, J.W.
登録日2018-01-25
公開日2018-05-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Insight into small molecule binding to the neonatal Fc receptor by X-ray crystallography and 100 kHz magic-angle-spinning NMR.
PLoS Biol., 16, 2018
7E9G
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BU of 7e9g by Molmil
Cryo-EM structure of Gi-bound metabotropic glutamate receptor mGlu2
分子名称: (1S,2S,5R,6S)-2-aminobicyclo[3.1.0]hexane-2,6-dicarboxylic acid, 1-butyl-3-chloranyl-4-(4-phenylpiperidin-1-yl)pyridin-2-one, DN13, ...
著者Lin, S, Han, S, Zhao, Q, Wu, B.
登録日2021-03-04
公開日2021-06-23
最終更新日2021-08-04
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structures of G i -bound metabotropic glutamate receptors mGlu2 and mGlu4.
Nature, 594, 2021
8FMX
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BU of 8fmx by Molmil
Langya virus F glycoprotein ectodomain in prefusion form
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Fusion glycoprotein, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Low, Y.S, Isaacs, A, Modhiran, N, Watterson, D.
登録日2022-12-26
公開日2023-06-28
実験手法ELECTRON MICROSCOPY (3.37 Å)
主引用文献Structure and antigenicity of divergent Henipavirus fusion glycoproteins.
Nat Commun, 14, 2023
8FMY
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BU of 8fmy by Molmil
Mojiang virus F ectodomain in prefusion form
分子名称: Fusion glycoprotein F0
著者Low, Y.S, Isaacs, A, Modhiran, N, Watterson, D.
登録日2022-12-26
公開日2023-06-28
実験手法ELECTRON MICROSCOPY (2.66 Å)
主引用文献Structure and antigenicity of divergent Henipavirus fusion glycoproteins.
Nat Commun, 14, 2023
6C99
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BU of 6c99 by Molmil
Crystal structure of FcRn bound to UCB-303
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-2-microglobulin, CITRIC ACID, ...
著者Fox III, D, Abendroth, J, Porter, J, Deboves, H.
登録日2018-01-25
公開日2018-05-30
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Insight into small molecule binding to the neonatal Fc receptor by X-ray crystallography and 100 kHz magic-angle-spinning NMR.
PLoS Biol., 16, 2018
8FEZ
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BU of 8fez by Molmil
Prefusion-stabilized SARS-CoV-2 spike protein
分子名称: Spike glycoprotein
著者Gonzalez, K.J, Mousa, J.J, Strauch, E.M.
登録日2022-12-07
公開日2023-04-12
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (3.72 Å)
主引用文献A general computational design strategy for stabilizing viral class I fusion proteins.
Nat Commun, 15, 2024
6CJ7
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BU of 6cj7 by Molmil
Crystal structure of Manduca sexta Serine protease inhibitor (Serpin)-12
分子名称: Serpin-12
著者Gulati, M, Hu, Y, Peng, S, Pathak, P.K, Wang, Y, Deng, J, Jiang, H.
登録日2018-02-26
公開日2018-07-04
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Manduca sexta serpin-12 controls the prophenoloxidase activation system in larval hemolymph.
Insect Biochem. Mol. Biol., 99, 2018
7F2B
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BU of 7f2b by Molmil
Crystal structure of SARS-CoV-2 nucleocapsid protein C-terminal RNA binding domain at 2.0A resolution
分子名称: CHLORIDE ION, Nucleoprotein, PHOSPHATE ION
著者Liu, C, Chen, Y.W.
登録日2021-06-10
公開日2021-09-01
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structures of the SARS-CoV-2 nucleocapsid protein C-terminal domain and development of nucleocapsid-targeting nanobodies.
Febs J., 289, 2022
6CRJ
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BU of 6crj by Molmil
Mouse norovirus model using the crystal structure of MNV P domain and the Norwalkvirus shell domain
分子名称: Norwalk virus, MNV-1 capsid protein chimera
著者Smith, T.J.
登録日2018-03-19
公開日2018-04-04
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (8 Å)
主引用文献Structural basis for murine norovirus engagement of bile acids and the CD300lf receptor.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
8FTT
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BU of 8ftt by Molmil
Crystal structure of a glycosylase specific nanobody
分子名称: Anti-NEIL1 Nanobody, SULFATE ION
著者Thompson, M.K, Prakash, A.
登録日2023-01-13
公開日2023-10-11
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献Deciphering the orthorhombic crystal structure of a novel NEIL1 nanobody with pseudo-merohedral twinning.
Biorxiv, 2023
7F2E
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BU of 7f2e by Molmil
SARS-CoV-2 nucleocapsid protein C-terminal domain (dodecamer)
分子名称: Nucleoprotein, PHOSPHATE ION
著者Liu, C, Jiang, H.
登録日2021-06-10
公開日2021-10-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Crystal structures of the SARS-CoV-2 nucleocapsid protein C-terminal domain and development of nucleocapsid-targeting nanobodies.
Febs J., 289, 2022
6C6Q
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BU of 6c6q by Molmil
Crystal Structure of the Murine Norovirus VP1 P Domain in complex with the CD300lf Receptor
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, CMRF35-like molecule 1, ...
著者Nelson, C.A, Fremont, D.H.
登録日2018-01-19
公開日2018-09-12
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis for murine norovirus engagement of bile acids and the CD300lf receptor.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6C74
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Crystal Structure of Murine CD300lf in complex with phosphocholine
分子名称: CALCIUM ION, CMRF35-like molecule-1, PHOSPHOCHOLINE
著者Nelson, C.A, Fremont, D.H.
登録日2018-01-19
公開日2018-09-12
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.358 Å)
主引用文献Structural basis for murine norovirus engagement of bile acids and the CD300lf receptor.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
8UUL
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BU of 8uul by Molmil
Prototypic SARS-CoV-2 spike (containing K417) in the closed conformation
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
著者Geng, Q, Liu, B, Li, F.
登録日2023-11-01
公開日2023-11-29
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Lys417 acts as a molecular switch that regulates the conformation of SARS-CoV-2 spike protein.
Elife, 12, 2023

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件を2024-07-31に公開中

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