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7MI1
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X-ray structure of yeast dynein motor domain in the presence of a pyrazolo-pyrimidinone-based compound (compound 20)
分子名称: Chimera protein of Dynein and Endolysin
著者Santarossa, C.C, Ekiert, D.C, Bhabha, G, Kapoor, T.M.
登録日2021-04-16
公開日2021-05-26
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (4.5 Å)
主引用文献Targeting allostery in the Dynein motor domain with small molecule inhibitors.
Cell Chem Biol, 28, 2021
7MI3
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BU of 7mi3 by Molmil
Signal subtracted reconstruction of AAA2, AAA3, and AAA4 domains of dynein in the presence of a pyrazolo-pyrimidinone-based compound, Model 4
分子名称: (8S)-6-(3-bromophenoxy)-2-[1-(4-chlorophenyl)cyclopropyl]-7-hydroxypyrazolo[1,5-a]pyrimidine-3-carbonitrile, ADENOSINE-5'-TRIPHOSPHATE, Fusion protein of Dynein and Endolysin, ...
著者Santarossa, C.C, Coudray, N, Urnavicius, L, Ekiert, D.C, Bhabha, G, Kapoor, T.M.
登録日2021-04-16
公開日2021-05-26
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Targeting allostery in the Dynein motor domain with small molecule inhibitors.
Cell Chem Biol, 28, 2021
6BL3
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Crystal Complex of Cyclooxygenase-2 with indomethacin-butyldiamine-dansyl conjugate
分子名称: 2-[1-(4-chlorobenzene-1-carbonyl)-5-methoxy-2-methyl-1H-indol-3-yl]-N-[4-({[5-(dimethylamino)naphthalen-1-yl]sulfonyl}amino)butyl]acetamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Xu, S, Uddin, M.J, Banerjee, S, Marnett, L.J.
登録日2017-11-09
公開日2018-11-14
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.217 Å)
主引用文献Fluorescent indomethacin-dansyl conjugates utilize the membrane-binding domain of cyclooxygenase-2 to block the opening to the active site.
J.Biol.Chem., 294, 2019
8V30
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BU of 8v30 by Molmil
Smooth Muscle Gamma Actin (ACTG2) Filament Mutant R40C
分子名称: ADENOSINE-5'-DIPHOSPHATE, Actin, gamma-enteric smooth muscle, ...
著者Palmer, N.J, Carman, P.J, Ceron, R.H, Dominguez, R.
登録日2023-11-25
公開日2024-05-01
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.54 Å)
主引用文献Molecular mechanisms linking missense ACTG2 mutations to visceral myopathy.
Sci Adv, 10, 2024
8V2O
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Cryo-EM Structure of Wildtype Smooth Muscle Gamma Actin (ACTG2)
分子名称: ADENOSINE-5'-DIPHOSPHATE, Actin, gamma-enteric smooth muscle, ...
著者Palmer, N.J, Carman, P.J, Ceron, R.H, Dominguez, R.
登録日2023-11-23
公開日2024-05-01
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.45 Å)
主引用文献Molecular mechanisms linking missense ACTG2 mutations to visceral myopathy.
Sci Adv, 10, 2024
6BL4
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Crystal Complex of Cyclooxygenase-2 with indomethacin-ethylenediamine-dansyl conjugate
分子名称: 2-[1-(4-chlorobenzene-1-carbonyl)-5-methoxy-2-methyl-1H-indol-3-yl]-N-[2-({[5-(dimethylamino)naphthalen-1-yl]sulfonyl}amino)ethyl]acetamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Xu, S, Uddin, M.J, Banerjee, S, Marnett, L.J.
登録日2017-11-09
公開日2018-11-14
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.22 Å)
主引用文献Fluorescent indomethacin-dansyl conjugates utilize the membrane-binding domain of cyclooxygenase-2 to block the opening to the active site.
J.Biol.Chem., 294, 2019
7ROX
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BU of 7rox by Molmil
BthTX-I complexed with inhibitor MMV
分子名称: 12-methoxy-Nb-methylvoachalotine, Basic phospholipase A2 homolog bothropstoxin-I
著者Borges, R.J, De Marino, I, Uson, I, Fontes, M.R.M.
登録日2021-08-02
公開日2022-11-09
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural and functional studies of a snake venom phospholipase A 2 -like protein complexed to an inhibitor from Tabernaemontana catharinensis.
Biochimie, 206, 2023
7MSO
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BU of 7mso by Molmil
Crystal Structure of Polo Box Domain in Complex with Cyclic Peptide Inhibitor
分子名称: Cyclic Peptide Inhibitor ZO1-GLN-SER-TPO-45W-MLL, Serine/threonine-protein kinase PLK1
著者Lim, D.C, Yaffe, M.B.
登録日2021-05-11
公開日2022-03-02
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Novel Macrocyclic Peptidomimetics Targeting the Polo-Box Domain of Polo-Like Kinase 1.
J.Med.Chem., 65, 2022
7R5N
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BU of 7r5n by Molmil
Crystal structure of the full-length short LOV protein PF5-LOV from Pseudomonas fluorescens (dark state)
分子名称: FLAVIN MONONUCLEOTIDE, Sensory box protein
著者Arinkin, V, Batra-Safferling, R, Granzin, J.
登録日2022-02-11
公開日2023-08-23
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (3.45 Å)
主引用文献Conserved Signal Transduction Mechanisms and Dark Recovery Kinetic Tuning in the Pseudomonadaceae Short Light, Oxygen, Voltage (LOV) Protein Family.
J.Mol.Biol., 2024
8UMU
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BU of 8umu by Molmil
Atomic model of the human CTF18-RFC-PCNA binary complex in the four-subunit binding state (state 3)
分子名称: ADENOSINE-5'-DIPHOSPHATE, Chromosome transmission fidelity protein 18 homolog, MAGNESIUM ION, ...
著者Wang, F, He, Q, Li, H.
登録日2023-10-18
公開日2024-05-08
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.16 Å)
主引用文献Cryo-EM reveals a nearly complete PCNA loading process and unique features of the human alternative clamp loader CTF18-RFC.
Proc.Natl.Acad.Sci.USA, 121, 2024
8UNJ
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BU of 8unj by Molmil
Atomic model of the human CTF18-RFC alone in the apo state (State 1)
分子名称: ADENOSINE-5'-DIPHOSPHATE, Chromosome transmission fidelity protein 18 homolog, MAGNESIUM ION, ...
著者Wang, F, He, Q, Li, H.
登録日2023-10-19
公開日2024-05-08
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.35 Å)
主引用文献Cryo-EM reveals a nearly complete PCNA loading process and unique features of the human alternative clamp loader CTF18-RFC.
Proc.Natl.Acad.Sci.USA, 121, 2024
8UMW
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BU of 8umw by Molmil
Atomic model of the human CTF18-RFC-PCNA-DNA ternary complex in the five-subunit binding state (state 4)
分子名称: ADENOSINE-5'-DIPHOSPHATE, Chromosome transmission fidelity protein 18 homolog, DNA (20-MER), ...
著者Wang, F, He, Q, Li, H.
登録日2023-10-18
公開日2024-05-08
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (2.93 Å)
主引用文献Cryo-EM reveals a nearly complete PCNA loading process and unique features of the human alternative clamp loader CTF18-RFC.
Proc.Natl.Acad.Sci.USA, 121, 2024
7RXD
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BU of 7rxd by Molmil
CryoEM structure of RBD domain of COVID-19 in complex with Legobody
分子名称: Fab_8D3_2 heavy chain, Fab_8D3_2 light chain, Maltodextrin-binding protein,Immunoglobulin G-binding protein A,Immunoglobulin G-binding protein G, ...
著者Wu, X.D, Rapoport, T.A.
登録日2021-08-22
公開日2021-10-06
最終更新日2021-10-20
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Cryo-EM structure determination of small proteins by nanobody-binding scaffolds (Legobodies).
Proc.Natl.Acad.Sci.USA, 118, 2021
4JNA
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BU of 4jna by Molmil
Crystal structure of the DepH complex with dimethyl-FK228
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, DepH, ...
著者Li, J, Wang, C, Zhang, Z.M, Zhou, J.H, Cheng, E.
登録日2013-03-14
公開日2014-03-05
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The structural basis of an NADP+-independent dithiol oxidase in FK228 biosynthesis.
Sci Rep, 4, 2014
5Z3J
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BU of 5z3j by Molmil
Crystal Structure of Abrin A chain (Recombinant) in complex with Nicotinamide at 1.7 Angstroms
分子名称: Abrin A-chain, IMIDAZOLE, NICOTINAMIDE
著者Bansia, H, Karande, A.A, Ramakumar, S.
登録日2018-01-08
公開日2019-01-02
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural basis for neutralization of cytotoxic abrin by monoclonal antibody D6F10.
FEBS J., 286, 2019
5Z8L
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BU of 5z8l by Molmil
crystal structure of Arabidopsis thaliana EBS in complex with an H3K27me3 peptide
分子名称: Chromatin remodeling protein EBS, H3K27me3 peptide, ZINC ION
著者Yang, Z, Du, J.
登録日2018-01-31
公開日2018-07-25
最終更新日2018-09-19
実験手法X-RAY DIFFRACTION (2.005 Å)
主引用文献EBS is a bivalent histone reader that regulates floral phase transition in Arabidopsis.
Nat. Genet., 50, 2018
8VX0
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BU of 8vx0 by Molmil
CRYSTAL STRUCTURE OF CYP2C9*14 IN COMPLEX WITH LOSARTAN
分子名称: Cytochrome P450 2C9, PHOSPHATE ION, POTASSIUM ION, ...
著者Shah, M.B.
登録日2024-02-02
公開日2024-06-12
最終更新日2024-06-26
実験手法X-RAY DIFFRACTION (3.05 Å)
主引用文献Structural and biophysical analysis of cytochrome P450 2C9*14 and *27 variants in complex with losartan.
J.Inorg.Biochem., 258, 2024
8TYI
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BU of 8tyi by Molmil
NMR structure of L5pG ([p23W, G24W]kalata B1)
分子名称: Kalata-B1
著者Tian, S, Craik, D.J, Conan, K.W.
登録日2023-08-25
公開日2024-03-13
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Nucleation of a key beta-turn promotes cyclotide oxidative folding.
J.Biol.Chem., 300, 2024
7SL9
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BU of 7sl9 by Molmil
CryoEM structure of SMCT1
分子名称: Sodium-coupled monocarboxylate transporter 1, butanoic acid, nanobody Nb2
著者Qu, Q, Han, L, Panova, O, Feng, L, Skiniotis, G.
登録日2021-10-23
公開日2021-12-15
最終更新日2022-01-26
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structure and mechanism of the SGLT family of glucose transporters.
Nature, 601, 2022
7SLA
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CryoEM structure of SGLT1 at 3.15 Angstrom resolution
分子名称: CHOLESTEROL HEMISUCCINATE, Sodium/glucose cotransporter 1, nanobody Nb1
著者Qu, Q, Han, L, Panova, O, Feng, L, Skiniotis, G.
登録日2021-10-23
公開日2021-12-15
最終更新日2022-01-26
実験手法ELECTRON MICROSCOPY (3.15 Å)
主引用文献Structure and mechanism of the SGLT family of glucose transporters.
Nature, 601, 2022
7NDY
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BU of 7ndy by Molmil
Di-phosphorylated Barrier-to-Autointegration Factor (BAF) in complex with LEM domain of Emerin
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Barrier-to-autointegration factor, N-terminally processed, ...
著者Marcelot, A, Le Du, M.H, Hoffmann, G, Zinn-Justin, S.
登録日2021-02-02
公開日2021-04-07
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.44 Å)
主引用文献Di-phosphorylated BAF shows altered structural dynamics and binding to DNA, but interacts with its nuclear envelope partners.
Nucleic Acids Res., 49, 2021
7SL8
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BU of 7sl8 by Molmil
CryoEM structure of SGLT1 at 3.4 A resolution
分子名称: CHOLESTEROL, Sodium/glucose cotransporter 1, nanobody Nb1
著者Qu, Q, Han, L, Panova, O, Feng, L, Skiniotis, G.
登録日2021-10-23
公開日2021-12-15
最終更新日2022-01-26
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structure and mechanism of the SGLT family of glucose transporters.
Nature, 601, 2022
7LDD
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BU of 7ldd by Molmil
native AMPA receptor
分子名称: 11B8 scFv, 15F1 Fab heavy chain, 15F1 Fab light chain, ...
著者Yu, J, Rao, P, Gouaux, E.
登録日2021-01-13
公開日2021-05-12
最終更新日2021-06-30
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Hippocampal AMPA receptor assemblies and mechanism of allosteric inhibition.
Nature, 594, 2021
7LDE
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native AMPA receptor
分子名称: 11B8 scFv, 15F1 Fab heavy chain, 15F1 Fab light chain, ...
著者Yu, J, Rao, P, Gouaux, E.
登録日2021-01-13
公開日2021-05-12
最終更新日2021-06-30
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Hippocampal AMPA receptor assemblies and mechanism of allosteric inhibition.
Nature, 594, 2021
8UMV
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BU of 8umv by Molmil
Atomic model of the human CTF18-RFC-PCNA-DNA ternary complex with narrow PCNA opening state I (state 5)
分子名称: ADENOSINE-5'-DIPHOSPHATE, Chromosome transmission fidelity protein 18 homolog, DNA (20-MER), ...
著者Wang, F, He, Q, Li, H.
登録日2023-10-18
公開日2024-05-08
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (2.75 Å)
主引用文献Cryo-EM reveals a nearly complete PCNA loading process and unique features of the human alternative clamp loader CTF18-RFC.
Proc.Natl.Acad.Sci.USA, 121, 2024

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件を2024-09-25に公開中

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