PDB: 97138 件ウェブページステータス検索Chemie searchBIRD

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6TQE	The structure of ABC transporter Rv1819c without addition of substrate 分子名称: ABC transporter ATP-binding protein/permease, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION 著者 Rempel, S, Gati, C, Slotboom, D.J, Guskov, A. 登録日 2019-12-16 公開日 2020-04-01 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (4.3 Å) 主引用文献 A mycobacterial ABC transporter mediates the uptake of hydrophilic compounds. Nature, 580, 2020
5KFY	Human DNA polymerase eta-DNA ternary complex: reaction first with 1 mM Mn2+ for 1800s then with 5 mM Mn2+ for 60s at 4 degree 分子名称: 1,2-ETHANEDIOL, 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, DNA (5'-D(*AP*GP*CP*GP*TP*CP*AP*T)-3'), ... 著者 Gao, Y, Yang, W. 登録日 2016-06-12 公開日 2016-06-22 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Capture of a third Mg2+ is essential for catalyzing DNA synthesis. Science, 352, 2016
6IPX	Crystal structure of the apo form transcription factor 分子名称: AimR transcriptional regulator 著者 Oy, S.Y, Zhen, X, Zhou, H, Ding, W. 登録日 2018-11-05 公開日 2019-01-23 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.634 Å) 主引用文献 Structural basis of AimP signaling molecule recognition by AimR in Spbeta group of bacteriophages. Protein Cell, 10, 2019
6IS8	Crystal structure of ZmMoc1 D115N mutant in complex with Holliday junction 分子名称: DNA (33-MER), MAGNESIUM ION, Monokaryotic chloroplast 1, ... 著者 Lin, Z, Lin, H, Zhang, D, Yuan, C. 登録日 2018-11-15 公開日 2019-10-23 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.68 Å) 主引用文献 Structural basis of sequence-specific Holliday junction cleavage by MOC1. Nat.Chem.Biol., 15, 2019
1K9B	Crystal structure of the bifunctional soybean Bowman-Birk inhibitor at 0.28 nm resolution. Structural peculiarities in a folded protein conformation 分子名称: BOWMAN-BIRK TYPE PROTEINASE INHIBITOR 著者 Voss, R.H, Ermler, U, Essen, L.O, Wenzl, G, Kim, Y.M, Flecker, P. 登録日 2001-10-29 公開日 2001-11-16 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Crystal structure of the bifunctional soybean Bowman-Birk inhibitor at 0.28-nm resolution. Structural peculiarities in a folded protein conformation. Eur.J.Biochem., 242, 1996
6HCN	Adenovirus Type 5 Fiber Knob protein at 1.49A resolution 分子名称: 1,2-ETHANEDIOL, Fiber protein, MAGNESIUM ION 著者 Rizkallah, P.J, Parker, A.L, Baker, A.T. 登録日 2018-08-15 公開日 2019-02-13 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.49 Å) 主引用文献 Diversity within the adenovirus fiber knob hypervariable loops influences primary receptor interactions. Nat Commun, 10, 2019
1QKJ	T4 Phage B-Glucosyltransferase, Substrate Binding and Proposed Catalytic Mechanism 分子名称: BETA-GLUCOSYLTRANSFERASE, URIDINE-5'-DIPHOSPHATE 著者 Morera, S, Imberty, I, Aschke-Sonnenborn, U, Ruger, W, Freemont, P.S. 登録日 1999-07-22 公開日 1999-07-28 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 T4 Phage Beta-Glucosyltransferase: Substrate Binding and Proposed Catalytic Mechanism J.Mol.Biol., 292, 1999
7AON	Crystal structure of CI2 double mutant L49I,I57V 分子名称: GLYCEROL, SULFATE ION, Subtilisin-chymotrypsin inhibitor-2A 著者 Olsen, J.G, Teilum, K, Hamborg, L, Roche, J.V. 登録日 2020-10-14 公開日 2020-12-09 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 Synergistic stabilization of a double mutant in chymotrypsin inhibitor 2 from a library screen in E. coli. Commun Biol, 4, 2021
7D8C	Crystal structure of the Cas12i1-crRNA binary complex 分子名称: 12i1, CITRIC ACID, RNA (3-MER), ... 著者 Zhang, B, Luo, D.Y, Li, Y, OuYang, S.Y. 登録日 2020-10-07 公開日 2021-05-19 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (3.6 Å) 主引用文献 Mechanistic insights into the R-loop formation and cleavage in CRISPR-Cas12i1. Nat Commun, 12, 2021
6HSO	Crystal structure of the ternary complex of GephE-ADP-Glycine receptor derived peptide 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,1'-benzene-1,4-diylbis(1H-pyrrole-2,5-dione), ACETATE ION, ... 著者 Kasaragod, V.B, Schindelin, H. 登録日 2018-10-01 公開日 2019-01-16 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Elucidating the Molecular Basis for Inhibitory Neurotransmission Regulation by Artemisinins. Neuron, 101, 2019
6V1Z	genome-containing AAVrh.39 particles 分子名称: Capsid protein VP1, DNA (5'-D(*CP*A)-3') 著者 Mietzsch, M, Agbandje-McKenna, M. 登録日 2019-11-21 公開日 2019-12-11 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (3.58 Å) 主引用文献 Comparative Analysis of the Capsid Structures of AAVrh.10, AAVrh.39, and AAV8. J.Virol., 94, 2020
5LMB	HUMAN SPLEEN TYROSINE KINASE KINASE DOMAIN IN COMPLEX WITH AZANAPHTHYRIDINE INHIBITOR 分子名称: 7-[6-(dimethylamino)pyridin-3-yl]-~{N}-[[(3~{S})-piperidin-3-yl]methyl]pyrido[3,4-b]pyrazin-5-amine, GLYCEROL, Tyrosine-protein kinase SYK 著者 Somers, D.O, Neu, M. 登録日 2016-07-29 公開日 2016-09-14 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Optimisation of a novel series of potent and orally bioavailable azanaphthyridine SYK inhibitors. Bioorg.Med.Chem.Lett., 26, 2016
4TVP	Crystal Structure of the HIV-1 BG505 SOSIP.664 Env Trimer Ectodomain, Comprising Atomic-Level Definition of Pre-Fusion gp120 and gp41, in Complex with Human Antibodies PGT122 and 35O22 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 35O22 Heavy chain, ... 著者 Pancera, M, Zhou, T, Kwong, P.D. 登録日 2014-06-27 公開日 2014-10-08 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Structure and immune recognition of trimeric pre-fusion HIV-1 Env. Nature, 514, 2014
2ZJK	Crystal structure of the human BACE1 catalytic domain in complex with 4-(4-fluoro-benzyl)-piperazine-2-carboxylic acid(3-mercapto-propyl)-amide 分子名称: (2S)-4-(4-fluorobenzyl)-N-(3-sulfanylpropyl)piperazine-2-carboxamide, Beta-secretase 1 著者 Randal, M, Lam, M.B, Lu, W, Romanowski, M.J. 登録日 2008-03-07 公開日 2009-01-20 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Fragment-based discovery of novel BACE1 inhibitors using Tethering technology To be Published
4TXT	Crystal Structure of a GH48 cellobiohydrolase from Caldicellulosiruptor bescii 分子名称: 1,2-ETHANEDIOL, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Glycoside hydrolase family 48, ... 著者 An, J, Feng, Y. 登録日 2014-07-07 公開日 2014-08-06 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Crystallization and preliminary X-ray analysis of a processive cellobiohydrolase CbCBH48A from Caldicellulosiruptor bescii To Be Published
4U05	Homodimeric Single Domain Antibody (sdAb) against Staphylococcal enterotoxin B (SEB) S74A Variant 分子名称: SULFATE ION, Single Domain Antibody 著者 Legler, P.M. 登録日 2014-07-11 公開日 2014-09-03 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structural and mutational analysis of a monomeric and dimeric form of a single domain antibody with implications for protein misfolding. Proteins, 82, 2014
2ZND	Crystal structure of Ca2+-free form of des3-20ALG-2 分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, PHOSPHATE ION, Programmed cell death protein 6, ... 著者 Suzuki, H, Kawasaki, M, Inuzuka, T, Kakiuchi, T, Shibata, H, Wakatsuki, S, Maki, M. 登録日 2008-04-22 公開日 2008-09-09 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Structural Basis for Ca(2+)-Dependent Formation of ALG-2/Alix Peptide Complex: Ca(2+)/EF3-Driven Arginine Switch Mechanism Structure, 16, 2008
7EIV	heterotetrameric glycyl-tRNA synthetase from Escherichia coli 分子名称: GLYCINE, Glycine--tRNA ligase alpha subunit, Glycine--tRNA ligase beta subunit, ... 著者 Ju, Y, Zhou, H. 登録日 2021-03-31 公開日 2021-08-11 最終更新日 2021-10-27 実験手法 X-RAY DIFFRACTION (2.68 Å) 主引用文献 X-shaped structure of bacterial heterotetrameric tRNA synthetase suggests cryptic prokaryote functions and a rationale for synthetase classifications. Nucleic Acids Res., 49, 2021
6V1T	Empty AAVrh.39 particle 分子名称: Capsid protein VP1 著者 Mietzsch, M, Agbandje-McKenna, M. 登録日 2019-11-21 公開日 2019-12-11 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (3.39 Å) 主引用文献 Comparative Analysis of the Capsid Structures of AAVrh.10, AAVrh.39, and AAV8. J.Virol., 94, 2020
2IS4	Crystal structure of UvrD-DNA-ADPNP ternary complex 分子名称: 25-MER, DNA helicase II, MAGNESIUM ION, ... 著者 Yang, W, Lee, J.Y. 登録日 2006-10-16 公開日 2007-01-09 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 UvrD helicase unwinds DNA one base pair at a time by a two-part power stroke. Cell(Cambridge,Mass.), 127, 2006
7AOK	Crystal structure of CI2 mutant L49I 分子名称: SULFATE ION, Subtilisin-chymotrypsin inhibitor-2A 著者 Olsen, J.G, Teilum, K, Hamborg, L, Roche, J.V. 登録日 2020-10-14 公開日 2020-12-09 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.87 Å) 主引用文献 Synergistic stabilization of a double mutant in chymotrypsin inhibitor 2 from a library screen in E. coli. Commun Biol, 4, 2021
1JN0	Crystal structure of the non-regulatory A4 isoform of spinach chloroplast glyceraldehyde-3-phosphate dehydrogenase complexed with NADP 分子名称: GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE A, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, SULFATE ION 著者 Fermani, S, Ripamonti, A, Sabatino, P, Zanotti, G, Scagliarini, S, Sparla, F, Trost, P, Pupillo, P. 登録日 2001-07-21 公開日 2001-11-30 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Crystal structure of the non-regulatory A(4 )isoform of spinach chloroplast glyceraldehyde-3-phosphate dehydrogenase complexed with NADP. J.Mol.Biol., 314, 2001
7W5P	Crystal Structure of the dioxygenase CcTet from Coprinopsis cinereain bound to 12bp N6-methyldeoxyadenine (6mA) containing duplex DNA 分子名称: CcTet, DNA, DNA (12-MER), ... 著者 Mu, Y.J, Zhang, L, Zhang, L. 登録日 2021-11-30 公開日 2022-03-30 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 A fungal dioxygenase CcTet serves as a eukaryotic 6mA demethylase on duplex DNA. Nat.Chem.Biol., 18, 2022
6TNH	Deoxyguanylosuccinate synthase (DgsS) quaternary structure with AMPPcP, dGMP, Asp, Magnesium at 2.21 Angstrom resolution 分子名称: 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE, ASPARTIC ACID, Adenylosuccinate synthetase, ... 著者 Sleiman, D, Loc'h, J, Haouz, A, Kaminski, P.A. 登録日 2019-12-08 公開日 2020-12-16 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.21 Å) 主引用文献 A third purine biosynthetic pathway encoded by aminoadenine-based viral DNA genomes. Science, 372, 2021
2ZJJ	Crystal structure of the human BACE1 catalytic domain in complex with 4-(4-fluoro-benzyl)-piperazine-2-carboxylic acid (2-mercapto-ethyl)-amide 分子名称: (2S)-4-(4-fluorobenzyl)-N-(2-sulfanylethyl)piperazine-2-carboxamide, Beta-secretase 1 著者 Randal, M, Lam, M.B, Romanowski, M.J. 登録日 2008-03-07 公開日 2009-01-20 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Fragment-based discovery of novel BACE1 inhibitors using Tethering technology To be Published

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