PDB: 97138 件ウェブページステータス検索Chemie searchBIRD

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5KG6	Human DNA polymerase eta-DNA ternary complex: reaction first with 1 mM Mn2+ for 1800s then with 10 mM Ca2+ for 60s 分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, DIPHOSPHATE, DNA (5'-D(*AP*GP*CP*GP*TP*CP*AP*TP*A)-3'), ... 著者 Gao, Y, Yang, W. 登録日 2016-06-12 公開日 2016-06-29 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Capture of a third Mg2+ is essential for catalyzing DNA synthesis. Science, 352, 2016
4QT0	Crystal structure of human muscle L-lactate dehydrogenase in complex with inhibitor 1, 3-{[3-CARBAMOYL-7-(2,4-DIMETHOXYPYRIMIDIN-5-YL)QUINOLIN-4-YL]AMINO}BENZOIC ACID 分子名称: 3-{[3-carbamoyl-7-(2,4-dimethoxypyrimidin-5-yl)quinolin-4-yl]amino}benzoic acid, L-lactate dehydrogenase A chain 著者 Kolappan, S, Craig, L. 登録日 2014-07-06 公開日 2014-12-03 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Structures of lactate dehydrogenase A (LDHA) in apo, ternary and inhibitor-bound forms. Acta Crystallogr.,Sect.D, 71, 2015
4RFO	Crystal structure of the ADCC-Potent Antibody N60-I3 Fab in complex with HIV-1 Clade A/E gp120 and M48u1 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, HIV-1 clade A/E gp120, N60-i3 Fab heavy chain, ... 著者 Tolbert, W.D, Gohain, N, Pazgier, M. 登録日 2014-09-26 公開日 2015-07-15 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Cocrystal Structures of Antibody N60-i3 and Antibody JR4 in Complex with gp120 Define More Cluster A Epitopes Involved in Effective Antibody-Dependent Effector Function against HIV-1. J.Virol., 89, 2015
6FM3	Deoxyguanylosuccinate synthase (DgsS) structure with ADP at 1.9 Angstrom resolution 分子名称: ADENOSINE-5'-DIPHOSPHATE, Adenylosuccinate synthetase, CHLORIDE ION 著者 Sleiman, D, Loc'h, J, Haouz, A, Kaminski, P.A. 登録日 2018-01-30 公開日 2019-06-12 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Deoxyguanylosuccinate synthase (DgsS) quaternary structure with ATP0, dGMP, Magnesium at 2.3 Angstrom resolution To Be Published
1J98	The 1.2 Angstrom Structure of Bacillus subtilis LuxS 分子名称: AUTOINDUCER-2 PRODUCTION PROTEIN LUXS, ZINC ION 著者 Ruzheinikov, S.N, Das, S.K, Sedelnikova, S.E, Hartley, A, Foster, S.J, Horsburgh, M.J, Cox, A.G, McCleod, C.W, Mekhalfia, A, Blackburn, G.M, Rice, D.W, Baker, P.J. 登録日 2001-05-24 公開日 2001-06-06 最終更新日 2021-10-27 実験手法 X-RAY DIFFRACTION (1.2 Å) 主引用文献 The 1.2 A Structure of a Novel Quorum-Sensing Protein, Bacillus subtilis LuxS J.Mol.Biol., 313, 2001
4QYR	Streptomyces platensis isomigrastatin ketosynthase domain MgsE KS3 分子名称: ACETIC ACID, AT-less polyketide synthase, CHLORIDE ION, ... 著者 Kim, Y, Li, H, Endres, M, Babnigg, J, Bingman, C.A, Yennamalli, R, Lohman, J.R, Ma, M, Shen, B, Phillips Jr, G.N, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Enzyme Discovery for Natural Product Biosynthesis (NatPro) 登録日 2014-07-25 公開日 2014-08-20 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (2.902 Å) 主引用文献 Structural and evolutionary relationships of "AT-less" type I polyketide synthase ketosynthases. Proc.Natl.Acad.Sci.USA, 112, 2015
6T89	Thrombin in complex with (S)-N-(tert-butyl)-4-(3-(3-carbamimidoylphenyl)-2-((2',4'-dimethoxy-[1,1'-biphenyl])-3-sulfonamido)propanoyl)piperazine-1-carboxamide (MI-498) 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-[(2~{S})-3-(3-carbamimidoylphenyl)-2-[[3-(4-methoxy-2-oxidanyl-phenyl)phenyl]sulfonylamino]propanoyl]-~{N}-methyl-piperazine-1-carboxamide, DIMETHYL SULFOXIDE, ... 著者 Ngaha, S.A, Sandner, A, Huber, S, Heine, A, Steinmetzer, T, Pilgram, O. 登録日 2019-10-24 公開日 2020-11-18 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Improving the selectivity of 3-amidinophenylalanine-derived matriptase inhibitors Eur.J.Med.Chem., 2022
4R4Z	Structure of PNGF-II in P21 space group 分子名称: PNGF-II 著者 Sun, G, Yu, X, Celimuge, Wang, L, Li, M, Gan, J, Qu, D, Ma, J, Chen, L. 登録日 2014-08-20 公開日 2015-01-28 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.81 Å) 主引用文献 Identification and Characterization of a Novel Prokaryotic Peptide: N-glycosidase from Elizabethkingia meningoseptica J.Biol.Chem., 2015
1IJD	Crystallographic Structure of the LH3 Complex from Rhodopseudomonas acidophila strain 7050 分子名称: BACTERIOCHLOROPHYLL A, LIGHT-HARVESTING PROTEIN B-800/820, ALPHA CHAIN, ... 著者 McLuskey, K, Prince, S.M, Cogdell, R.J, Isaacs, N.W. 登録日 2001-04-25 公開日 2001-10-17 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 The crystallographic structure of the B800-820 LH3 light-harvesting complex from the purple bacteria Rhodopseudomonas acidophila strain 7050. Biochemistry, 40, 2001
2YYK	Crystal structure of the mutant of HpaB (T198I, A276G, and R466H) 分子名称: 4-hydroxyphenylacetate-3-hydroxylase, ACETIC ACID, GLYCEROL, ... 著者 Kim, S.-H, Hisano, T, Takeda, K, Iwasaki, W, Ebihara, A, Miki, K. 登録日 2007-04-30 公開日 2007-09-04 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Crystal Structure of the Oxygenase Component (HpaB) of the 4-Hydroxyphenylacetate 3-Monooxygenase from Thermus thermophilus HB8 J.Biol.Chem., 282, 2007
7WRK	Structure of hypothetical protein TTHA1873 from Thermus thermophilus 分子名称: CALCIUM ION, hypothetical protein TTHA1873 著者 Yuvaraj, I, Santosh, K.C, Sekar, K. 登録日 2022-01-27 公開日 2022-03-09 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (1.78 Å) 主引用文献 Structure of the hypothetical protein TTHA1873 from Thermus thermophilus. Acta Crystallogr.,Sect.F, 78, 2022
5KFK	Human DNA polymerase eta-DNA ternary complex: reaction with 10 mM Mn2+ for 300s 分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, CALCIUM ION, DIPHOSPHATE, ... 著者 Gao, Y, Yang, W. 登録日 2016-06-12 公開日 2016-06-22 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Capture of a third Mg2+ is essential for catalyzing DNA synthesis. Science, 352, 2016
5KFU	Human DNA polymerase eta R61A-DNA ternary complex: reaction with 1 mM Mg2+ for 80s 分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(*AP*GP*CP*GP*TP*CP*AP*T)-3'), ... 著者 Gao, Y, Yang, W. 登録日 2016-06-12 公開日 2016-06-22 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Capture of a third Mg2+ is essential for catalyzing DNA synthesis. Science, 352, 2016
6TQF	The structure of ABC transporter Rv1819c in AMP-PNP bound state 分子名称: ABC transporter ATP-binding protein/permease, DODECYL-BETA-D-MALTOSIDE, MAGNESIUM ION, ... 著者 Rempel, S, Gati, C, Slotboom, D.J, Guskov, A. 登録日 2019-12-16 公開日 2020-04-01 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 A mycobacterial ABC transporter mediates the uptake of hydrophilic compounds. Nature, 580, 2020
7BX2	The solution NMR structure of VV14 peptide in the presence of Deuterated SDS micelle. 分子名称: VAL-LYS-TRP-VAL-LYS-LYS-VAL-VAL-LYS-TRP-VAL-LYS-LYS-VAL 著者 Bhunia, A, Mohid, S.A, Chowdhury, N. 登録日 2020-04-16 公開日 2021-04-21 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Effect of Secondary Structure and Side Chain Length of Hydrophobic Amino Acid Residues on the Antimicrobial Activity and Toxicity of 14-Residue-Long de novo AMPs. Chemmedchem, 16, 2021
4R4X	Structure of PNGF-II in C2 space group 分子名称: PNGF-II, ZINC ION 著者 Sun, G, Yu, X, Celimuge, Wang, L, Li, M, Gan, J, Qu, D, Ma, J, Chen, L. 登録日 2014-08-20 公開日 2015-01-28 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Identification and Characterization of a Novel Prokaryotic Peptide: N-glycosidase from Elizabethkingia meningoseptica J.Biol.Chem., 2015
1L0C	Investigation of the Roles of Catalytic Residues in Serotonin N-Acetyltransferase 分子名称: COA-S-ACETYL TRYPTAMINE, Serotonin N-acetyltransferase 著者 Scheibner, K.A, De Angelis, J, Burley, S.K, Cole, P.A. 登録日 2002-02-08 公開日 2002-06-19 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Investigation of the roles of catalytic residues in serotonin N-acetyltransferase. J.Biol.Chem., 277, 2002
7CCU	Crystal structure of death-associated protein kinase 1 in complex with resveratrol 分子名称: Death-associated protein kinase 1, RESVERATROL, SULFATE ION 著者 Yokoyama, T, Suzuki, R, Mizuguchi, M. 登録日 2020-06-18 公開日 2021-01-20 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.649 Å) 主引用文献 Crystal structure of death-associated protein kinase 1 in complex with the dietary compound resveratrol. Iucrj, 8, 2020
7W9T	Cryo-EM structure of human Nav1.7(E406K) in complex with auxiliary beta subunits, huwentoxin-IV and saxitoxin (S6IV alpha helix conformer) 分子名称: (3beta,14beta,17beta,25R)-3-[4-methoxy-3-(methoxymethyl)butoxy]spirost-5-en, 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1-O-OCTADECYL-SN-GLYCERO-3-PHOSPHOCHOLINE, ... 著者 Yan, N, Huang, G, Liu, D, Wei, P. 登録日 2021-12-10 公開日 2022-05-25 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 High-resolution structures of human Na v 1.7 reveal gating modulation through alpha-pi helical transition of S6 IV. Cell Rep, 39, 2022
5JO7	Henbane premnaspirodiene synthase (HPS), also known as Henbane vetispiradiene synthase (HVS) from Hyoscyamus muticus 分子名称: Vetispiradiene synthase 1 著者 Koo, H.J, Xu, Y, Louie, G.V, Bowman, M, Noel, J.P. 登録日 2016-05-02 公開日 2017-05-03 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Functional study of terpene synthase from 512 mutant library of henbane premnaspirodiene synthase reveals protein residue interactions To Be Published
6G46	Red kidney bean purple acid phosphatase in complex with 2-(Naphthalen-1-yl)thiazole-4-carboxylic acid 分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-naphthalen-1-yl-1,3-thiazole-4-carboxylic acid, ... 著者 Feder, D.F. 登録日 2018-03-26 公開日 2018-09-26 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Purple acid phosphatase inhibitors as leads for osteoporosis chemotherapeutics. Eur J Med Chem, 157, 2018
5KFA	Human DNA polymerase eta-DNA ternary complex: ground state at pH7.0 (K+ MES) with 1 Ca2+ ion 分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(*AP*GP*CP*GP*TP*CP*AP*T)-3'), ... 著者 Gao, Y, Yang, W. 登録日 2016-06-12 公開日 2016-06-22 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.51 Å) 主引用文献 Capture of a third Mg2+ is essential for catalyzing DNA synthesis. Science, 352, 2016
5KFJ	Human DNA polymerase eta-DNA ternary complex: reaction with 10 mM Mn2+ for 180s 分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, CALCIUM ION, DIPHOSPHATE, ... 著者 Gao, Y, Yang, W. 登録日 2016-06-12 公開日 2016-06-22 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Capture of a third Mg2+ is essential for catalyzing DNA synthesis. Science, 352, 2016
5KFV	Human DNA polymerase eta R61A-DNA ternary complex: reaction with 1 mM Mg2+ for 140s 分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(*AP*GP*CP*GP*TP*CP*AP*T)-3'), ... 著者 Gao, Y, Yang, W. 登録日 2016-06-12 公開日 2016-06-22 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Capture of a third Mg2+ is essential for catalyzing DNA synthesis. Science, 352, 2016
5KG7	Human DNA polymerase eta-DNA ternary complex: reaction first with 1 mM Mn2+ for 1800s then with 10 mM Zn2+ for 60s 分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, DIPHOSPHATE, DNA (5'-D(*AP*GP*CP*GP*TP*CP*AP*TP*A)-3'), ... 著者 Gao, Y, Yang, W. 登録日 2016-06-12 公開日 2016-06-22 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Capture of a third Mg2+ is essential for catalyzing DNA synthesis. Science, 352, 2016

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