PDB: 1477 件ウェブページステータス検索Chemie searchBIRD

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6B4V	Antibiotic blasticidin S and E. coli release factor 1 bound to the 70S ribosome 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Svidritskiy, E, Korostelev, A.A. 登録日 2017-09-27 公開日 2018-02-07 最終更新日 2019-12-25 実験手法 X-RAY DIFFRACTION (3.4 Å) 主引用文献 Mechanism of Inhibition of Translation Termination by Blasticidin S. J. Mol. Biol., 430, 2018
6AZ1	Cryo-EM structure of the small subunit of Leishmania ribosome bound to paromomycin 分子名称: E-site tRNA, LACK1, MAGNESIUM ION, ... 著者 Shalev-Benami, M, Zhang, Y, Rozenberg, H, Matzov, D, Zimmerman, E, Bashan, A, Jaffe, C.L, Yonath, A, Skiniotis, G. 登録日 2017-09-09 公開日 2017-12-06 最終更新日 2019-07-03 実験手法 ELECTRON MICROSCOPY (2.7 Å) 主引用文献 Atomic resolution snapshot of Leishmania ribosome inhibition by the aminoglycoside paromomycin. Nat Commun, 8, 2017
6AWB	Structure of 30S ribosomal subunit and RNA polymerase complex in non-rotated state 分子名称: 16S rRNA, 30S ribosomal protein S1, 30S ribosomal protein S10, ... 著者 Demo, G, Rasouly, A, Vasilyev, N, Loveland, A.B, Diaz-Avalos, R, Grigorieff, N, Nudler, E, Korostelev, A.A. 登録日 2017-09-05 公開日 2017-10-18 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (6.7 Å) 主引用文献 Structure of RNA polymerase bound to ribosomal 30S subunit. Elife, 6, 2017
6AWD	Structure of 30S (S1 depleted) ribosomal subunit and RNA polymerase complex 分子名称: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... 著者 Demo, G, Rasouly, A, Vasilyev, N, Loveland, A.B, Diaz-Avalos, R, Grigorieff, N, Nudler, E, Korostelev, A.A. 登録日 2017-09-05 公開日 2017-10-18 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (8.1 Å) 主引用文献 Structure of RNA polymerase bound to ribosomal 30S subunit. Elife, 6, 2017
6AWC	Structure of 30S ribosomal subunit and RNA polymerase complex in rotated state 分子名称: 16S rRNA, 30S ribosomal protein S1, 30S ribosomal protein S10, ... 著者 Demo, G, Rasouly, A, Vasilyev, N, Loveland, A.B, Diaz-Avalos, R, Grigorieff, N, Nudler, E, Korostelev, A.A. 登録日 2017-09-05 公開日 2017-10-18 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (7.9 Å) 主引用文献 Structure of RNA polymerase bound to ribosomal 30S subunit. Elife, 6, 2017
5OT7	Elongation factor G-ribosome complex captures in the absence of inhibitors. 分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ... 著者 Mace, K, Giudice, E, Chat, S, Gillet, R. 登録日 2017-08-21 公開日 2018-02-14 最終更新日 2018-04-11 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 The structure of an elongation factor G-ribosome complex captured in the absence of inhibitors. Nucleic Acids Res., 46, 2018
5OQL	Cryo-EM structure of the 90S pre-ribosome from Chaetomium thermophilum 分子名称: 35S rRNA, 40S ribosomal protein S1, 40S ribosomal protein S11-like protein, ... 著者 Cheng, J, Kellner, N, Berninghausen, O, Hurt, E, Beckmann, R. 登録日 2017-08-12 公開日 2017-10-11 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 3.2- angstrom -resolution structure of the 90S preribosome before A1 pre-rRNA cleavage. Nat. Struct. Mol. Biol., 24, 2017
5OPT	Structure of KSRP in context of Trypanosoma cruzi 40S 分子名称: 18S rRNA, 40S ribosomal protein S10, putative, ... 著者 Brito Querido, J, Mancera-Martinez, E, Vicens, Q, Bochler, A, Chicher, J, Simonetti, A, Hashem, Y. 登録日 2017-08-10 公開日 2017-11-15 最終更新日 2017-12-13 実験手法 ELECTRON MICROSCOPY (4 Å) 主引用文献 The cryo-EM Structure of a Novel 40S Kinetoplastid-Specific Ribosomal Protein. Structure, 25, 2017
5ON6	Crystal structure of haemanthamine bound to the 80S ribosome 分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ... 著者 Pellegrino, S, Meyer, M, Yusupova, G, Yusupov, M. 登録日 2017-08-03 公開日 2018-02-28 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (3.10000229 Å) 主引用文献 The Amaryllidaceae Alkaloid Haemanthamine Binds the Eukaryotic Ribosome to Repress Cancer Cell Growth. Structure, 26, 2018
5WNU	Crystal Structure of 30S ribosomal subunit from Thermus thermophilus 分子名称: (1R,2S,3S,4R,6R)-4,6-diamino-2-{[3-O-(2,6-diamino-2,6-dideoxy-alpha-L-altropyranosyl)-beta-L-arabinofuranosyl]oxy}-3-hydroxycyclohexyl 2-amino-2-deoxy-alpha-D-allopyranoside, 16S Ribosomal RNA rRNA, 30S ribosomal protein S10, ... 著者 DeMirci, H. 登録日 2017-08-01 公開日 2018-02-21 最終更新日 2020-10-21 実験手法 X-RAY DIFFRACTION (3.4 Å) 主引用文献 2'-O-methylation in mRNA disrupts tRNA decoding during translation elongation. Nat. Struct. Mol. Biol., 25, 2018
5WNQ	Crystal Structure of 30S ribosomal subunit from Thermus thermophilus 分子名称: 16S Ribosomal RNA rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... 著者 DeMirci, H. 登録日 2017-08-01 公開日 2018-02-21 最終更新日 2020-10-21 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 2'-O-methylation in mRNA disrupts tRNA decoding during translation elongation. Nat. Struct. Mol. Biol., 25, 2018
5WNS	Crystal Structure of 30S ribosomal subunit from Thermus thermophilus 分子名称: 16S Ribosomal RNA rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... 著者 DeMirci, H. 登録日 2017-08-01 公開日 2018-02-21 最終更新日 2020-10-21 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 2'-O-methylation in mRNA disrupts tRNA decoding during translation elongation. Nat. Struct. Mol. Biol., 25, 2018
5WNR	Crystal Structure of 30S ribosomal subunit from Thermus thermophilus 分子名称: 16S Ribosomal RNA rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... 著者 DeMirci, H. 登録日 2017-08-01 公開日 2018-02-21 最終更新日 2020-10-21 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 2'-O-methylation in mRNA disrupts tRNA decoding during translation elongation. Nat. Struct. Mol. Biol., 25, 2018
5WNV	Crystal Structure of 30S ribosomal subunit from Thermus thermophilus 分子名称: (1R,2S,3S,4R,6R)-4,6-diamino-2-{[3-O-(2,6-diamino-2,6-dideoxy-alpha-L-altropyranosyl)-beta-L-arabinofuranosyl]oxy}-3-hydroxycyclohexyl 2-amino-2-deoxy-alpha-D-allopyranoside, 16S Ribosomal RNA rRNA, 30S ribosomal protein S10, ... 著者 DeMirci, H. 登録日 2017-08-01 公開日 2018-02-21 最終更新日 2020-10-21 実験手法 X-RAY DIFFRACTION (3.3 Å) 主引用文献 2'-O-methylation in mRNA disrupts tRNA decoding during translation elongation. Nat. Struct. Mol. Biol., 25, 2018
5WNP	Crystal Structure of 30S ribosomal subunit from Thermus thermophilus 分子名称: 16S Ribosomal RNA rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... 著者 DeMirci, H. 登録日 2017-08-01 公開日 2018-02-21 最終更新日 2020-10-21 実験手法 X-RAY DIFFRACTION (3.3 Å) 主引用文献 2'-O-methylation in mRNA disrupts tRNA decoding during translation elongation. Nat. Struct. Mol. Biol., 25, 2018
5WNT	Crystal Structure of 30S ribosomal subunit from Thermus thermophilus 分子名称: (1R,2S,3S,4R,6R)-4,6-diamino-2-{[3-O-(2,6-diamino-2,6-dideoxy-alpha-L-altropyranosyl)-beta-L-arabinofuranosyl]oxy}-3-hydroxycyclohexyl 2-amino-2-deoxy-alpha-D-allopyranoside, 16S Ribosomal RNA rRNA, MAGNESIUM ION, ... 著者 DeMirci, H. 登録日 2017-08-01 公開日 2018-02-21 最終更新日 2020-10-21 実験手法 X-RAY DIFFRACTION (3.3 Å) 主引用文献 2'-O-methylation in mRNA disrupts tRNA decoding during translation elongation. Nat. Struct. Mol. Biol., 25, 2018
5WLC	The complete structure of the small subunit processome 分子名称: 18S pre-rRNA, 5' ETS, Bms1, ... 著者 Barandun, J, Chaker-Margot, M, Hunziker, M, Klinge, S. 登録日 2017-07-26 公開日 2017-09-27 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 The complete structure of the small-subunit processome. Nat. Struct. Mol. Biol., 24, 2017
5WIS	Crystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution 分子名称: (3R,4S,5S,7R,9E,11S,12R)-12-ethyl-11-hydroxy-3,5,7,11-tetramethyl-2,8-dioxooxacyclododec-9-en-4-yl 3,4,6-trideoxy-3-(dimethylamino)-beta-D-xylo-hexopyranoside, 16S Ribosomal RNA, 23S ribosomal RNA, ... 著者 Almutairi, M.M, Svetlov, M.S, Hansen, D.A, Khabibullina, N.F, Klepacki, D, Kang, H.Y, Sherman, D.H, Vazquez-Laslop, N, Polikanov, Y.S, Mankin, A.S. 登録日 2017-07-20 公開日 2018-02-14 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.703 Å) 主引用文献 Co-produced natural ketolides methymycin and pikromycin inhibit bacterial growth by preventing synthesis of a limited number of proteins. Nucleic Acids Res., 45, 2017
5WIT	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution 分子名称: (3R,5R,6S,7S,9R,11E,13S,14R)-14-ethyl-13-hydroxy-3,5,7,9,13-pentamethyl-2,4,10-trioxo-1-oxacyclotetradec-11-en-6-yl 3,4,6-trideoxy-3-(dimethylamino)-beta-D-xylo-hexopyranoside, 16S Ribosomal RNA, 23S Ribosomal RNA, ... 著者 Almutairi, M.M, Svetlov, M.S, Hansen, D.A, Khabibullina, N.F, Klepacki, D, Kang, H.Y, Sherman, D.H, Vazquez-Laslop, N, Polikanov, Y.S, Mankin, A.S. 登録日 2017-07-20 公開日 2018-02-14 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Co-produced natural ketolides methymycin and pikromycin inhibit bacterial growth by preventing synthesis of a limited number of proteins. Nucleic Acids Res., 45, 2017
5WFK	70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3) 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Fislage, M, Frank, J. 登録日 2017-07-12 公開日 2018-05-02 最終更新日 2019-11-20 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Cryo-EM shows stages of initial codon selection on the ribosome by aa-tRNA in ternary complex with GTP and the GTPase-deficient EF-TuH84A. Nucleic Acids Res., 46, 2018
5WFS	70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4) 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Fislage, M, Frank, J. 登録日 2017-07-12 公開日 2018-05-02 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Cryo-EM shows stages of initial codon selection on the ribosome by aa-tRNA in ternary complex with GTP and the GTPase-deficient EF-TuH84A. Nucleic Acids Res., 46, 2018
5WF0	70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C2) 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Fislage, M, Frank, J. 登録日 2017-07-11 公開日 2018-05-02 最終更新日 2019-11-20 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Cryo-EM shows stages of initial codon selection on the ribosome by aa-tRNA in ternary complex with GTP and the GTPase-deficient EF-TuH84A. Nucleic Acids Res., 46, 2018
5XYU	Small subunit of Mycobacterium smegmatis ribosome 分子名称: 16S RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... 著者 Li, Z, Zhang, Y, Zheng, L, Ge, X, Sanyal, S, Gao, N. 登録日 2017-07-10 公開日 2017-09-27 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (3.45 Å) 主引用文献 Cryo-EM structure of Mycobacterium smegmatis ribosome reveals two unidentified ribosomal proteins close to the functional centers. Protein Cell, 9, 2018
5XYI	Small subunit of Trichomonas vaginalis ribosome 分子名称: 18S, 40S ribosomal protein S13, putative, ... 著者 Li, Z, Guo, Q, Zheng, L, Ji, Y, Xie, Y, Lai, D, Lun, Z, Suo, X, Gao, N. 登録日 2017-07-08 公開日 2017-08-30 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (3.35 Å) 主引用文献 Cryo-EM structures of the 80S ribosomes from human parasites Trichomonas vaginalis and Toxoplasma gondii Cell Res., 27, 2017
5WE6	70S ribosome-EF-Tu H84A complex with GTP and cognate tRNA 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Fislage, M, Frank, J. 登録日 2017-07-07 公開日 2018-04-25 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Cryo-EM shows stages of initial codon selection on the ribosome by aa-tRNA in ternary complex with GTP and the GTPase-deficient EF-TuH84A. Nucleic Acids Res., 46, 2018

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