Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3R93
DownloadVisualize
BU of 3r93 by Molmil
Crystal structure of the chromo domain of M-phase phosphoprotein 8 bound to H3K9Me3 peptide
分子名称: H3K9Me3 peptide, M-phase phosphoprotein 8, UNKNOWN ATOM OR ION
著者Li, J, Li, Z, Ruan, J, Xu, C, Tong, Y, Pan, P.W, Tempel, W, Crombet, L, Min, J, Zang, J, Structural Genomics Consortium (SGC)
登録日2011-03-24
公開日2011-04-06
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.057 Å)
主引用文献Structural basis for specific binding of human MPP8 chromodomain to histone H3 methylated at lysine 9.
Plos One, 6, 2011
3R9L
DownloadVisualize
BU of 3r9l by Molmil
Crystal structure of nucleoside diphosphate kinase from Giardia lamblia featuring a disordered dinucleotide binding site
分子名称: CHLORIDE ION, Nucleoside diphosphate kinase
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2011-03-25
公開日2011-04-20
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Crystal structure of nucleoside diphosphate kinase from Giardia lamblia featuring a disordered dinucleotide binding site
To be Published
3R9S
DownloadVisualize
BU of 3r9s by Molmil
Structure of a carnitinyl-CoA dehydratase from Mycobacterium avium 104
分子名称: 1,2-ETHANEDIOL, BENZOIC ACID, Carnitinyl-CoA dehydratase
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2011-03-25
公開日2011-04-13
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Increasing the structural coverage of tuberculosis drug targets.
Tuberculosis (Edinb), 95, 2015
3RUU
DownloadVisualize
BU of 3ruu by Molmil
FXR with SRC1 and GSK237
分子名称: 6-(4-{[3-(2,6-dichlorophenyl)-5-(propan-2-yl)-1,2-oxazol-4-yl]methoxy}phenyl)-1H-indole-3-carboxylic acid, Bile acid receptor, Nuclear receptor coactivator 1, ...
著者Williams, S.P, Madauss, K.P.
登録日2011-05-05
公開日2011-09-21
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.502 Å)
主引用文献Conformationally constrained farnesoid X receptor (FXR) agonists: Alternative replacements of the stilbene.
Bioorg.Med.Chem.Lett., 21, 2011
3RYB
DownloadVisualize
BU of 3ryb by Molmil
Lactococcal OppA complexed with SLSQSLSQS
分子名称: Oligopeptide, Oligopeptide-binding protein oppA
著者Berntsson, R.P.-A, Thunnissen, A.-M.W.H, Poolman, B, Slotboom, D.-J.
登録日2011-05-11
公開日2011-06-29
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Importance of a Hydrophobic Pocket for Peptide Binding in Lactococcal OppA.
J.Bacteriol., 193, 2011
3RZI
DownloadVisualize
BU of 3rzi by Molmil
The structure of 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase from mycobacterium tuberculosis cocrystallized and complexed with phenylalanine and tryptophan
分子名称: CHLORIDE ION, GLYCEROL, MANGANESE (II) ION, ...
著者Jiao, W, Jameson, G.B, Hutton, R.D, Parker, E.J.
登録日2011-05-11
公開日2012-01-25
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Dynamic cross-talk among remote binding sites: the molecular basis for unusual synergistic allostery.
J.Mol.Biol., 415, 2012
3S8S
DownloadVisualize
BU of 3s8s by Molmil
Crystal structure of the RRM domain of human SETD1A
分子名称: Histone-lysine N-methyltransferase SETD1A, UNKNOWN ATOM OR ION
著者Chao, X, Tempel, W, Bian, C, Cerovina, T, Walker, J.R, Bountra, C, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
登録日2011-05-30
公開日2011-06-08
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Crystal structure of the RRM domain of human SETD1A
to be published
3S13
DownloadVisualize
BU of 3s13 by Molmil
Crystal structure of H5N1 influenza virus hemagglutinin, strain YU562 crystal form 2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin HA1 chain, Hemagglutinin HA2 chain, ...
著者DuBois, R.M, Zaraket, H, Reddivari, M, Heath, R.J, White, S.W, Russell, C.J.
登録日2011-05-14
公開日2011-12-14
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.96 Å)
主引用文献Acid stability of the hemagglutinin protein regulates H5N1 influenza virus pathogenicity.
Plos Pathog., 7, 2011
3SB7
DownloadVisualize
BU of 3sb7 by Molmil
Cu-mediated Trimer of T4 Lysozyme D61H/K65H/R76H/R80H by Synthetic Symmetrization
分子名称: COPPER (II) ION, GLYCEROL, Lysozyme
著者Soriaga, A.B, Laganowsky, A, Zhao, M, Sawaya, M.R, Cascio, D, Yeates, T.O.
登録日2011-06-03
公開日2011-09-21
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献An approach to crystallizing proteins by metal-mediated synthetic symmetrization.
Protein Sci., 20, 2011
3SBH
DownloadVisualize
BU of 3sbh by Molmil
Crystal structure of human carbonic anhydrase isozyme II with 4-{[(4,6-dimethyl-2-pyrimidinyl)sulfanyl]acetyl}benzenesulfonamide
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 4-{[(4,6-dimethylpyrimidin-2-yl)sulfanyl]acetyl}benzenesulfonamide, BICINE, ...
著者Grazulis, S, Manakova, E, Tamulaitiene, G.
登録日2011-06-05
公開日2012-04-11
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Design of [(2-pyrimidinylthio)acetyl]benzenesulfonamides as inhibitors of human carbonic anhydrases.
Eur.J.Med.Chem., 51, 2012
3RUZ
DownloadVisualize
BU of 3ruz by Molmil
Crystal structure of Staphylococcal nuclease variant Delta+PHS V74K at cryogenic temperature
分子名称: CALCIUM ION, THYMIDINE-3',5'-DIPHOSPHATE, Thermonuclease
著者Caro, J.A, Clark, I, Heroux, A, Schlessman, J.L, Garcia-Moreno E, B.
登録日2011-05-05
公開日2011-06-15
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Internal ionizable residues in proteins
To be Published
3RU8
DownloadVisualize
BU of 3ru8 by Molmil
Structure of an HIV epitope scaffold in complex with neutralizing antibody b12 Fab
分子名称: Antibody b12, Heavy Chain, Light Chain, ...
著者Carrico, C.T.D, Strong, R.K.
登録日2011-05-04
公開日2011-11-02
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献Computation-guided backbone grafting of a discontinuous motif onto a protein scaffold.
Science, 334, 2011
3RUR
DownloadVisualize
BU of 3rur by Molmil
Staphylococcus aureus heme-bound selenomethionine-labeled IsdB-N2
分子名称: Iron-regulated surface determinant protein B, MAGNESIUM ION, PROTOPORPHYRIN IX CONTAINING FE
著者Gaudin, C.F.M, Grigg, J.C, Arrieta, A.L, Murphy, M.E.P.
登録日2011-05-05
公開日2011-05-18
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Unique Heme-Iron Coordination by the Hemoglobin Receptor IsdB of Staphylococcus aureus.
Biochemistry, 50, 2011
3RW7
DownloadVisualize
BU of 3rw7 by Molmil
Structure of N-terminal domain of nuclear RNA export factor TAP
分子名称: Nuclear RNA export factor 1
著者Teplova, M, Khin, N.W, Wohlbold, L, Izaurralde, E, Patel, D.J.
登録日2011-05-07
公開日2011-08-10
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structure-function studies of nucleocytoplasmic transport of retroviral genomic RNA by mRNA export factor TAP.
Nat.Struct.Mol.Biol., 18, 2011
3S72
DownloadVisualize
BU of 3s72 by Molmil
The origin of the hydrophobic effect in the molecular recognition of arylsulfonamides by carbonic anhydrase
分子名称: 1H-benzimidazole-2-sulfonamide, Carbonic anhydrase 2, DIMETHYL SULFOXIDE, ...
著者Snyder, P.W, Heroux, A, Whitesides, G.W.
登録日2011-05-26
公開日2011-10-19
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Mechanism of the hydrophobic effect in the biomolecular recognition of arylsulfonamides by carbonic anhydrase.
Proc.Natl.Acad.Sci.USA, 108, 2011
3S78
DownloadVisualize
BU of 3s78 by Molmil
The origin of the hydrophobic effect in the molecular recognition of arylsulfonamides by carbonic anhydrase
分子名称: Carbonic anhydrase 2, ZINC ION, thiophene-2-sulfonamide
著者Snyder, P.W, Heroux, A, Whitesides, G.W.
登録日2011-05-26
公開日2011-10-19
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Mechanism of the hydrophobic effect in the biomolecular recognition of arylsulfonamides by carbonic anhydrase.
Proc.Natl.Acad.Sci.USA, 108, 2011
3RYY
DownloadVisualize
BU of 3ryy by Molmil
Fluoroalkyl and Alkyl Chains Have Similar Hydrophobicities in Binding to the Hydrophobic Wall of Carbonic Anhydrase
分子名称: Carbonic anhydrase 2, N-propyl-4-sulfamoylbenzamide, ZINC ION
著者Snyder, P.W, Bai, S, Heroux, A, Whitesides, G.W.
登録日2011-05-11
公開日2011-08-10
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.16 Å)
主引用文献Fluoroalkyl and alkyl chains have similar hydrophobicities in binding to the "hydrophobic wall" of carbonic anhydrase.
J.Am.Chem.Soc., 133, 2011
3RUN
DownloadVisualize
BU of 3run by Molmil
New strategy to analyze structures of glycopeptide antibiotic-target complexes
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
著者Economou, N.J, Townsend, T.M, Loll, P.J.
登録日2011-05-05
公開日2012-06-06
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献A carrier protein strategy yields the structure of dalbavancin.
J.Am.Chem.Soc., 134, 2012
3RUT
DownloadVisualize
BU of 3rut by Molmil
FXR with SRC1 and GSK359
分子名称: 6-(4-{[3-(2,6-dichlorophenyl)-5-(propan-2-yl)-1,2-oxazol-4-yl]methoxy}phenyl)-1-benzothiophene-3-carboxylic acid, Bile acid receptor, Nuclear receptor coactivator 1, ...
著者Williams, S.P, Madauss, K.P.
登録日2011-05-05
公開日2011-09-21
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Conformationally constrained farnesoid X receptor (FXR) agonists: Alternative replacements of the stilbene.
Bioorg.Med.Chem.Lett., 21, 2011
3RV2
DownloadVisualize
BU of 3rv2 by Molmil
Crystal structure of S-adenosylmethionine synthetase from Mycobacterium marinum
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, GLYCEROL, ...
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2011-05-05
公開日2011-05-18
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Increasing the structural coverage of tuberculosis drug targets.
Tuberculosis (Edinb), 95, 2015
3RWT
DownloadVisualize
BU of 3rwt by Molmil
Crystal structure of circular permutated Red Fluorescent Protein mKate(cp 154-153)
分子名称: Fluorescent protein FP480,Fluorescent protein FP480, MAGNESIUM ION
著者Wang, Q, Sondermann, H.
登録日2011-05-09
公開日2011-06-15
最終更新日2017-11-08
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Circular permutation of red fluorescent proteins.
Plos One, 6, 2011
3S9L
DownloadVisualize
BU of 3s9l by Molmil
Complex between transferrin receptor 1 and transferrin with iron in the N-Lobe, cryocooled 2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, CARBONATE ION, ...
著者Eckenroth, B.E, Steere, A.N, Mason, A.B, Everse, S.J.
登録日2011-06-01
公開日2011-08-10
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (3.22 Å)
主引用文献How the binding of human transferrin primes the transferrin receptor potentiating iron release at endosomal pH.
Proc.Natl.Acad.Sci.USA, 108, 2011
3SA2
DownloadVisualize
BU of 3sa2 by Molmil
Bacuills anthracis Dihydrofolate Reductase bound propargyl-linked TMP analog, UCP1014
分子名称: 6-ethyl-5-[3-(5-methoxybiphenyl-3-yl)prop-1-yn-1-yl]pyrimidine-2,4-diamine, Dihydrofolate reductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Anderson, A.C, Beierlein, J.M.
登録日2011-06-02
公開日2012-06-13
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献SAR studies of heterocyclic propargyl-linked TMP analogs to Bacillus dihydrofolate reductase
to be published
3SDC
DownloadVisualize
BU of 3sdc by Molmil
Crystal structure of autoreactive-Valpha14-Vbeta6 NKT TCR in complex with CD1d-globotrihexosylceramide
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Antigen-presenting glycoprotein CD1d1, ...
著者Clarke, A.J, Rossjohn, J.
登録日2011-06-09
公開日2011-10-05
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Recognition of beta-linked self glycolipids mediated by natural killer T cell antigen receptors
Nat.Immunol., 12, 2011
3SB6
DownloadVisualize
BU of 3sb6 by Molmil
Cu-mediated Dimer of T4 Lysozyme D61H/K65H/R76H/R80H by Synthetic Symmetrization
分子名称: CHLORIDE ION, COPPER (II) ION, Lysozyme
著者Soriaga, A.B, Laganowsky, A, Zhao, M, Sawaya, M.R, Cascio, D, Yeates, T.O.
登録日2011-06-03
公開日2011-09-21
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献An approach to crystallizing proteins by metal-mediated synthetic symmetrization.
Protein Sci., 20, 2011

222415

件を2024-07-10に公開中

PDB statisticsPDBj update infoContact PDBjnumon