PDB: 45331 件ウェブページステータス検索Chemie searchBIRD

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5H9V	Crystal structure of Regnase PIN domain, form I 分子名称: Ribonuclease ZC3H12A, SODIUM ION 著者 Yokogawa, M, Tsushima, T, Adachi, W, Noda, N.N, Inagaki, F. 登録日 2015-12-29 公開日 2016-03-16 最終更新日 2020-02-19 実験手法 X-RAY DIFFRACTION (2.75 Å) 主引用文献 Structural basis for the regulation of enzymatic activity of Regnase-1 by domain-domain interactions Sci Rep, 6, 2016
6HCT	Crystal structure of Archeoglobus fulgidus L7Ae bound to its cognate UTR k-turn 分子名称: 50S ribosomal protein L7Ae, RNA (5'-R(*GP*CP*CP*GP*AP*UP*GP*AP*AP*UP*G)-3'), RNA (5'-R(*GP*CP*CP*GP*AP*UP*GP*AP*AP*UP*GP*CP*AP*UP*GP*AP*AP*GP*C)-3'), ... 著者 Huang, L, Lilley, D.M.J. 登録日 2018-08-16 公開日 2018-10-31 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (3.091 Å) 主引用文献 The role of RNA structure in translational regulation by L7Ae protein in archaea. RNA, 25, 2019
7YF7	NMR solution structures of the DNA minidumbbell formed by two ATTTT repeats 分子名称: DNA (5'-D(*AP*TP*TP*TP*TP*AP*TP*TP*TP*T)-3'), SODIUM ION 著者 Wan, L, Li, J, Guo, P. 登録日 2022-07-07 公開日 2023-01-11 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Solution Nuclear Magnetic Resonance Structures of ATTTT and ATTTC Pentanucleotide Repeats Associated with SCA37 and FAMEs. Acs Chem Neurosci, 14, 2023
7VM9	Solution NMR structures of DNA minidumbbell formed with two regular CTTTG pentaloops 分子名称: DNA (5'-D(*CP*TP*TP*TP*GP*CP*TP*TP*TP*G)-3'), SODIUM ION 著者 Ngai, C.K, Guo, P. 登録日 2021-10-08 公開日 2022-02-16 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 A purine and a backbone discontinuous site alter the structure and thermal stability of DNA minidumbbells containing two pentaloops. Febs Lett., 596, 2022
3USK	Crystal structure of LeuT bound to L-leucine in space group P21 from lipid bicelles 分子名称: LEUCINE, SODIUM ION, Transporter 著者 Wang, H, Elferich, J, Gouaux, E. 登録日 2011-11-23 公開日 2012-01-11 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (4.5 Å) 主引用文献 Structures of LeuT in bicelles define conformation and substrate binding in a membrane-like context. Nat.Struct.Mol.Biol., 19, 2012
8CV3	Human Excitatory excitatory amino acid transporter 3 (EAAT3) protomer at in an intermediate outward facing sodium-bound state 分子名称: Excitatory amino acid transporter 3, SODIUM ION 著者 Qiu, B, Boudker, O. 登録日 2022-05-17 公開日 2023-05-10 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (3.04 Å) 主引用文献 Symport and antiport mechanisms of human glutamate transporters. Nat Commun, 14, 2023
8CV2	Human excitatory amino acid transporter 3 (EAAT3) in an outward facing sodium-bound state 分子名称: Excitatory amino acid transporter 3, SODIUM ION 著者 Qiu, B, Boudker, O. 登録日 2022-05-17 公開日 2023-05-10 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (2.44 Å) 主引用文献 Symport and antiport mechanisms of human glutamate transporters. Nat Commun, 14, 2023
5LLU	Structure of the thermostabilized EAAT1 cryst-II mutant in complex with L-ASP 分子名称: ASPARTIC ACID, Excitatory amino acid transporter 1,Neutral amino acid transporter B(0),Excitatory amino acid transporter 1, SODIUM ION 著者 Canul-Tec, J, Assal, R, Legrand, P, Reyes, N. 登録日 2016-07-28 公開日 2017-04-19 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (3.32 Å) 主引用文献 Structure and allosteric inhibition of excitatory amino acid transporter 1. Nature, 544, 2017
6GTO	Structure of the AtaR antitoxin 分子名称: DUF1778 domain-containing protein, SODIUM ION 著者 Garcia-Pino, A, Jurenas, D. 登録日 2018-06-18 公開日 2019-03-06 最終更新日 2024-05-15 実験手法 X-RAY DIFFRACTION (2.97 Å) 主引用文献 Mechanism of regulation and neutralization of the AtaR-AtaT toxin-antitoxin system. Nat. Chem. Biol., 15, 2019
8SZZ	CryoEM Structure of Computationally Designed Nanocage O32-ZL4 分子名称: O32-ZL4 Component A, O32-ZL4 Component B, SODIUM ION 著者 Weidle, C, Borst, A. 登録日 2023-05-30 公開日 2023-11-01 最終更新日 2023-12-27 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 Accurate computational design of three-dimensional protein crystals. Nat Mater, 22, 2023
7UGX	Asp-bound GltPh RSMR mutant in IFS-B1 state 分子名称: ASPARTIC ACID, Glutamate transporter homolog, SODIUM ION 著者 Huang, Y, Boudker, O. 登録日 2022-03-25 公開日 2023-03-29 最終更新日 2023-05-10 実験手法 ELECTRON MICROSCOPY (2.96 Å) 主引用文献 Environmentally Ultrasensitive Fluorine Probe to Resolve Protein Conformational Ensembles by 19 F NMR and Cryo-EM. J.Am.Chem.Soc., 145, 2023
7UH6	Asp-bound GltPh RSMR mutant in IFS-B2 state 分子名称: ASPARTIC ACID, Glutamate transporter homolog, SODIUM ION 著者 Huang, Y, Boudker, O. 登録日 2022-03-25 公開日 2023-03-29 最終更新日 2023-05-10 実験手法 ELECTRON MICROSCOPY (3.44 Å) 主引用文献 Environmentally Ultrasensitive Fluorine Probe to Resolve Protein Conformational Ensembles by 19F NMR and Cryo-EM J.Am.Chem.Soc., 145, 2023
7UH3	Asp-bound GltPh RSMR mutant in iOFS state 分子名称: ASPARTIC ACID, Glutamate transporter homolog, SODIUM ION 著者 Huang, Y, Boudker, O. 登録日 2022-03-25 公開日 2023-03-29 最終更新日 2023-05-10 実験手法 ELECTRON MICROSCOPY (2.99 Å) 主引用文献 Environmentally Ultrasensitive Fluorine Probe to Resolve Protein Conformational Ensembles by 19F NMR and Cryo-EM J.Am.Chem.Soc., 145, 2023
2WSY	CRYSTAL STRUCTURE OF WILD-TYPE TRYPTOPHAN SYNTHASE 分子名称: PYRIDOXAL-5'-PHOSPHATE, SODIUM ION, TRYPTOPHAN SYNTHASE 著者 Schneider, T.R, Gerhardt, E, Lee, M, Liang, P.-H, Anderson, K.S, Schlichting, I. 登録日 1998-02-18 公開日 1999-03-30 最終更新日 2023-08-09 実験手法 X-RAY DIFFRACTION (3.05 Å) 主引用文献 Loop closure and intersubunit communication in tryptophan synthase. Biochemistry, 37, 1998
5CD1	Structure of an asymmetric tetramer of human tRNA m1A58 methyltransferase in a complex with SAH and tRNA3Lys 分子名称: S-ADENOSYL-L-HOMOCYSTEINE, SODIUM ION, tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A, ... 著者 Finer-Moore, J, Czudnochowski, N, O'Connell III, J.D, Wang, A.L, Stroud, R.M. 登録日 2015-07-02 公開日 2015-11-04 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (3.6 Å) 主引用文献 Crystal Structure of the Human tRNA m(1)A58 Methyltransferase-tRNA3(Lys) Complex: Refolding of Substrate tRNA Allows Access to the Methylation Target. J.Mol.Biol., 427, 2015
3E0Y	The crystal structure of a conserved domain from a protein of Geobacter sulfurreducens PCA 分子名称: Conserved domain protein, SODIUM ION 著者 Tan, K, Bigelow, L, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG) 登録日 2008-08-01 公開日 2008-09-30 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 The crystal structure of a conserved domain from a protein of Geobacter sulfurreducens PCA To be Published
3USJ	Crystal structure of LeuT bound to L-leucine in space group P21 from lipid bicelles 分子名称: LEUCINE, SODIUM ION, Transporter 著者 Wang, H, Elferich, J, Gouaux, E. 登録日 2011-11-23 公開日 2012-01-11 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 Structures of LeuT in bicelles define conformation and substrate binding in a membrane-like context. Nat.Struct.Mol.Biol., 19, 2012
3USO	Crystal structure of LeuT bound to L-selenomethionine in space group P21212 from lipid bicelles 分子名称: SELENOMETHIONINE, SODIUM ION, Transporter 著者 Wang, H, Elferich, J, Gouaux, E. 登録日 2011-11-23 公開日 2012-01-11 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (4.5 Å) 主引用文献 Structures of LeuT in bicelles define conformation and substrate binding in a membrane-like context. Nat.Struct.Mol.Biol., 19, 2012
8W6N	NaS1 with sulfate in IN/OUT state 分子名称: SODIUM ION, SULFATE ION, Solute carrier family 13 member 1 著者 Chi, X, Chen, Y, Li, Y, Zhang, Y, Shen, Y, Chen, Y, Wang, Z, Yan, R. 登録日 2023-08-29 公開日 2024-04-17 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Cryo-EM structures of the human NaS1 and NaDC1 transporters revealed the elevator transport and allosteric regulation mechanism. Sci Adv, 10, 2024
6H3Z	Crystal structure of a C-terminal MIF4G domain in NOT1 分子名称: CCR4-not transcription complex subunit 1, SODIUM ION 著者 Raisch, T, Sandmeir, F, Weichenrieder, O, Valkov, E, Izaurralde, E. 登録日 2018-07-19 公開日 2018-11-07 最終更新日 2024-05-15 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Structural and biochemical analysis of a NOT1 MIF4G-like domain of the CCR4-NOT complex. J. Struct. Biol., 204, 2018
6CSE	Crystal structure of sodium/alanine symporter AgcS with L-alanine bound 分子名称: ALANINE, Monoclonal antibody FAB heavy chain, Monoclonal antibody FAB light chain, ... 著者 Ma, J, Reyes, F.E, Gonen, T. 登録日 2018-03-20 公開日 2019-01-30 最終更新日 2019-02-20 実験手法 X-RAY DIFFRACTION (3.24 Å) 主引用文献 Structural basis for substrate binding and specificity of a sodium-alanine symporter AgcS. Proc. Natl. Acad. Sci. U.S.A., 116, 2019
6X01	Crystal structure of the GltPh V216C-A391C mutant cross-linked in outward-facing state 分子名称: ASPARTIC ACID, Glutamate transporter homolog, SODIUM ION 著者 Chen, I, Font, J, Ryan, R. 登録日 2020-05-15 公開日 2021-02-17 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (3.65 Å) 主引用文献 Glutamate transporters have a chloride channel with two hydrophobic gates. Nature, 591, 2021
6D8G	D341A D367A calcium binding mutant of Bacteroides uniformis beta-glucuronidase 2 分子名称: Glycosyl hydrolases family 2, sugar binding domain protein, SODIUM ION 著者 Walton, W.G, Pellock, S.J, Redinbo, M.R. 登録日 2018-04-26 公開日 2018-10-17 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Three structurally and functionally distinct beta-glucuronidases from the human gut microbeBacteroides uniformis. J. Biol. Chem., 293, 2018
6ZD2	Structure of apo telomerase from Candida Tropicalis truncated from C-terminal domain 分子名称: SODIUM ION, Telomerase reverse transcriptase 著者 Zhai, L, Rety, S, Chen, W.F, Auguin, D, Xi, X.G. 登録日 2020-06-13 公開日 2021-04-28 最終更新日 2024-05-15 実験手法 X-RAY DIFFRACTION (2.84 Å) 主引用文献 Crystal structures of N-terminally truncated telomerase reverse transcriptase from fungi‡. Nucleic Acids Res., 49, 2021
2WG4	Crystal structure of the complex between human hedgehog-interacting protein HIP and sonic hedgehog without calcium 分子名称: HEDGEHOG-INTERACTING PROTEIN, SODIUM ION, SONIC HEDGEHOG PROTEIN N-PRODUCT, ... 著者 Bishop, B, Aricescu, A.R, Harlos, K, O'Callaghan, C.A, Jones, E.Y, Siebold, C. 登録日 2009-04-15 公開日 2009-06-30 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (3.15 Å) 主引用文献 Structural Insights Into Hedgehog Ligand Sequestration by the Human Hedgehog-Interacting Protein Hip Nat.Struct.Mol.Biol., 16, 2009

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