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8GRO
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BU of 8gro by Molmil
AtOSCA3.1 contracted state
分子名称: CSC1-like protein ERD4
著者Zhang, M.F.
登録日2022-09-02
公開日2023-06-14
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献A mechanical-coupling mechanism in OSCA/TMEM63 channel mechanosensitivity.
Nat Commun, 14, 2023
8GQU
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BU of 8gqu by Molmil
AK-42 inhibitor binding human ClC-2 TMD
分子名称: 2-[[2,6-bis(chloranyl)-3-phenylmethoxy-phenyl]amino]pyridine-3-carboxylic acid, Chloride channel protein 2
著者Wang, L.
登録日2022-08-30
公開日2023-07-05
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Cryo-EM structures of ClC-2 chloride channel reveal the blocking mechanism of its specific inhibitor AK-42.
Nat Commun, 14, 2023
6PXE
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BU of 6pxe by Molmil
Crystal structure of the complex between periplasmic domains of antiholin RI and holin T from T4 phage, in P21
分子名称: Antiholin, Holin
著者Krieger, I.V, Sacchettini, J.C.
登録日2019-07-25
公開日2020-06-24
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The Structural Basis of T4 Phage Lysis Control: DNA as the Signal for Lysis Inhibition.
J.Mol.Biol., 432, 2020
4XRE
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BU of 4xre by Molmil
Crystal structure of Gnk2 complexed with mannose
分子名称: Antifungal protein ginkbilobin-2, alpha-D-mannopyranose
著者Miyakawa, T, Hatano, K, Miyauchi, Y, Suwa, Y, Sawano, Y, Tanokura, M.
登録日2015-01-21
公開日2015-02-25
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.597 Å)
主引用文献A secreted protein with plant-specific cysteine-rich motif functions as a mannose-binding lectin that exhibits antifungal activity.
Plant Physiol., 166, 2014
4Q6G
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BU of 4q6g by Molmil
Crystal Structure of the C-terminal domain of AcKRS-1 bound with N-acetyl-lysine and ADPNP
分子名称: 1,2-ETHANEDIOL, N(6)-ACETYLLYSINE, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
著者Eiler, D.R, Kavran, J, Steitz, T.A.
登録日2014-04-22
公開日2014-11-12
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Polyspecific pyrrolysyl-tRNA synthetases from directed evolution.
Proc.Natl.Acad.Sci.USA, 111, 2014
4Q05
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BU of 4q05 by Molmil
Crystal structure of an esterase E25
分子名称: SODIUM ION, esterase E25
著者Li, P.Y, Li, C.Y, Zhang, Y.Z.
登録日2014-03-31
公開日2014-06-04
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structural basis for dimerization and catalysis of a novel esterase from the GTSAG motif subfamily of the bacterial hormone-sensitive lipase family
J.Biol.Chem., 289, 2014
8GTY
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BU of 8gty by Molmil
Crystal structure of exopolyphosphatase (PPX) from Zymomonas mobilis in complex with magnesium ions
分子名称: MAGNESIUM ION, Ppx/GppA phosphatase
著者Lu, Z, Wang, J, Zhang, B.
登録日2022-09-09
公開日2023-09-13
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure of the exopolyphosphatase (PPX) from Zymomonas mobilis reveals a two-magnesium-ions PPX.
Int.J.Biol.Macromol., 262, 2024
4YGE
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BU of 4yge by Molmil
Crystal structure of ERGIC-53/MCFD2, trigonal calcium-bound form 2
分子名称: CALCIUM ION, CHLORIDE ION, Multiple coagulation factor deficiency protein 2, ...
著者Satoh, T, Nishio, M, Yagi-Utsumi, M, Suzuki, K, Anzai, T, Mizushima, T, Kamiya, Y, Kato, K.
登録日2015-02-26
公開日2016-04-06
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.05 Å)
主引用文献Crystallographic snapshots of the EF-hand protein MCFD2 complexed with the intracellular lectin ERGIC-53 involved in glycoprotein transport.
Acta Crystallogr.,Sect.F, 76, 2020
4YOP
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BU of 4yop by Molmil
CRYSTAL STRUCTURE OF HEN EGG-WHITE LYSOZYME
分子名称: CHLORIDE ION, Lysozyme C, SODIUM ION
著者Sugahara, M, Nakane, T, Suzuki, M, Nango, E.
登録日2015-03-12
公開日2015-12-23
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Native sulfur/chlorine SAD phasing for serial femtosecond crystallography
Acta Crystallogr.,Sect.D, 71, 2015
4YGC
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BU of 4ygc by Molmil
Crystal structure of ERGIC-53/MCFD2, monoclinic calcium-bound form 1
分子名称: CALCIUM ION, CHLORIDE ION, Multiple coagulation factor deficiency protein 2, ...
著者Satoh, T, Nishio, M, Yagi-Utsumi, M, Suzuki, K, Anzai, T, Mizushima, T, Kamiya, Y, Kato, K.
登録日2015-02-26
公開日2016-04-06
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystallographic snapshots of the EF-hand protein MCFD2 complexed with the intracellular lectin ERGIC-53 involved in glycoprotein transport.
Acta Crystallogr.,Sect.F, 76, 2020
4YGD
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BU of 4ygd by Molmil
Crystal structure of ERGIC-53/MCFD2, monoclinic calcium-bound form 2
分子名称: CALCIUM ION, CHLORIDE ION, Multiple coagulation factor deficiency protein 2, ...
著者Satoh, T, Nishio, M, Yagi-Utsumi, M, Suzuki, K, Anzai, T, Mizushima, T, Kamiya, Y, Kato, K.
登録日2015-02-26
公開日2016-04-06
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献Crystallographic snapshots of the EF-hand protein MCFD2 complexed with the intracellular lectin ERGIC-53 involved in glycoprotein transport.
Acta Crystallogr.,Sect.F, 76, 2020
8GHK
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BU of 8ghk by Molmil
CryoEM structure of Influenza A virus A/Melbourner/1/1946 (H1N1) hemagglutinin bound to GS10-X6-BE4 Fab
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GS10-X6-BE4 Fab Heavy chain, ...
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2023-03-10
公開日2024-06-26
最終更新日2024-08-28
実験手法ELECTRON MICROSCOPY (3.47 Å)
主引用文献Structural basis for the broad antigenicity of the computationally optimized influenza hemagglutinin X6.
Structure, 32, 2024
5CGZ
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BU of 5cgz by Molmil
Crystal structure of GalB, the 4-carboxy-2-hydroxymuconate hydratase, from Pseuodomonas putida KT2440
分子名称: 4-oxalmesaconate hydratase, GLYCEROL, ZINC ION
著者Mazurkewich, S, Brott, A.S, Kimber, M.S, Seah, S.Y.K.
登録日2015-07-09
公開日2016-02-17
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.103 Å)
主引用文献Structural and Kinetic Characterization of the 4-Carboxy-2-hydroxymuconate Hydratase from the Gallate and Protocatechuate 4,5-Cleavage Pathways of Pseudomonas putida KT2440.
J.Biol.Chem., 291, 2016
3JR8
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BU of 3jr8 by Molmil
Crystal Structure of BthTX-II (Asp49-PLA2 from Bothrops jararacussu snake venom) with calcium ions
分子名称: CALCIUM ION, Phospholipase A2 bothropstoxin-2
著者Borges, R.J, dos Santos, J.I, Fontes, M.R.M.
登録日2009-09-08
公開日2010-09-08
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural, functional, and bioinformatics studies reveal a new snake venom homologue phospholipase A2 class.
Proteins, 79, 2011
5CNA
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BU of 5cna by Molmil
REFINED STRUCTURE OF CONCANAVALIN A COMPLEXED WITH ALPHA-METHYL-D-MANNOPYRANOSIDE AT 2.0 ANGSTROMS RESOLUTION AND COMPARISON WITH THE SACCHARIDE-FREE STRUCTURE
分子名称: CALCIUM ION, CHLORIDE ION, CONCANAVALIN A, ...
著者Naismith, J.H, Emmerich, C, Habash, J, Harrop, S.J, Helliwell, J.R, Hunter, W.N, Raftery, J, Kalb(Gilboa), A.J, Yariv, J.
登録日1994-02-11
公開日1994-05-31
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Refined structure of concanavalin A complexed with methyl alpha-D-mannopyranoside at 2.0 A resolution and comparison with the saccharide-free structure.
Acta Crystallogr.,Sect.D, 50, 1994
8HMV
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BU of 8hmv by Molmil
Structure of GPR21-Gs complex
分子名称: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(s) subunit alpha isoforms short, ...
著者Wong, T.S, Gao, W.
登録日2022-12-05
公開日2023-03-01
実験手法ELECTRON MICROSCOPY (2.91 Å)
主引用文献Cryo-EM structure of orphan G protein-coupled receptor GPR21.
MedComm (2020), 4, 2023
6GPL
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BU of 6gpl by Molmil
Crystal structure of human GDP-D-mannose 4,6-dehydratase in complex with GDP-4k6d-Man
分子名称: 1,2-ETHANEDIOL, BICINE, GDP-mannose 4,6 dehydratase, ...
著者Pfeiffer, M, Krojer, T, Johansson, C, von Delft, F, Bountra, C, Arrowsmith, C.H, Edwards, A, Nidetzky, B, Oppermann, U, Structural Genomics Consortium (SGC)
登録日2018-06-06
公開日2018-07-18
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献A Parsimonious Mechanism of Sugar Dehydration by Human GDP-Mannose-4,6-dehydratase.
Acs Catalysis, 9, 2019
6REQ
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BU of 6req by Molmil
METHYLMALONYL-COA MUTASE, 3-CARBOXYPROPYL-COA INHIBITOR COMPLEX
分子名称: 3-CARBOXYPROPYL-COENZYME A, COBALAMIN, GLYCEROL, ...
著者Evans, P.R, Mancia, F.
登録日1998-09-03
公開日1999-09-09
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of substrate complexes of methylmalonyl-CoA mutase.
Biochemistry, 38, 1999
4X6R
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BU of 4x6r by Molmil
An Isoform-specific Myristylation Switch Targets RIIb PKA Holoenzymes to Membranes
分子名称: ADENOSINE-5'-TRIPHOSPHATE, GLYCEROL, MAGNESIUM ION, ...
著者Zhang, P, Ye, F, Bastidas, A.C, Kornev, A.P, Ginsberg, M.H, Wu, J, Taylor, S.S.
登録日2014-12-09
公開日2015-07-22
最終更新日2020-06-24
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献An Isoform-Specific Myristylation Switch Targets Type II PKA Holoenzymes to Membranes.
Structure, 23, 2015
6GUF
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BU of 6guf by Molmil
CDK2/CyclinA in complex with CGP74514A
分子名称: Cyclin-A2, Cyclin-dependent kinase 2, N2-[(1R,2S)-2-AMINOCYCLOHEXYL]-N6-(3-CHLOROPHENYL)-9-ETHYL-9H-PURINE-2,6-DIAMINE
著者Wood, D.J, Korolchuk, S, Tatum, N.J, Wang, L.Z, Endicott, J.A, Noble, M.E.M, Martin, M.P.
登録日2018-06-19
公開日2018-12-05
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Differences in the Conformational Energy Landscape of CDK1 and CDK2 Suggest a Mechanism for Achieving Selective CDK Inhibition.
Cell Chem Biol, 26, 2019
6R4A
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BU of 6r4a by Molmil
Aurora-A in complex with shape-diverse fragment 55
分子名称: 2-(benzimidazol-1-yl)-~{N}-(2-phenylethyl)ethanamide, ADENOSINE-5'-DIPHOSPHATE, Aurora kinase A, ...
著者Bayliss, R, McIntyre, P.J.
登録日2019-03-22
公開日2019-05-08
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.937 Å)
主引用文献Construction of a Shape-Diverse Fragment Set: Design, Synthesis and Screen against Aurora-A Kinase.
Chemistry, 25, 2019
4R50
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BU of 4r50 by Molmil
Crystal Structure of CNG mimicking NaK-ETPP mutant cocrystallized with Li+
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, GLYCINE, Potassium channel protein
著者De March, M, Napolitano, L.M.R, Onesti, S.
登録日2014-08-20
公開日2015-07-01
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献A structural, functional, and computational analysis suggests pore flexibility as the base for the poor selectivity of CNG channels.
Proc.Natl.Acad.Sci.USA, 112, 2015
4WNU
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BU of 4wnu by Molmil
Human Cytochrome P450 2D6 Quinidine Complex
分子名称: Cytochrome P450 2D6, DIMETHYL SULFOXIDE, GLYCEROL, ...
著者Wang, A, Stout, C.D, Johnson, E.F.
登録日2014-10-14
公開日2015-01-14
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献Contributions of Ionic Interactions and Protein Dynamics to Cytochrome P450 2D6 (CYP2D6) Substrate and Inhibitor Binding.
J.Biol.Chem., 290, 2015
8H9H
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BU of 8h9h by Molmil
Crystal structure of ZBTB7A in complex with GACCC-containing sequence
分子名称: DNA (5'-D(*TP*AP*AP*GP*GP*AP*CP*CP*CP*AP*GP*AP*T)-3'), DNA (5'-D(P*AP*AP*TP*CP*TP*GP*GP*GP*TP*CP*CP*TP*T)-3'), ZINC ION, ...
著者Yang, Y.
登録日2022-10-25
公開日2023-04-26
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献ZBTB7A regulates primed-to-naive transition of pluripotent stem cells via recognition of the PNT-associated sequence by zinc fingers 1-2 and recognition of gamma-globin -200 gene element by zinc fingers 1-4.
Febs J., 290, 2023
8HAL
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BU of 8hal by Molmil
Cryo-EM structure of the CBP catalytic core bound to the H4K12acK16ac nucleosome, class 1
分子名称: CREB-binding protein, DNA (180-mer), Histone H2A type 1-B/E, ...
著者Kikuchi, M, Morita, S, Wakamori, M, Shin, S, Uchikubo-Kamo, T, Shirouzu, M, Umehara, T.
登録日2022-10-26
公開日2023-05-17
最終更新日2023-07-26
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Epigenetic mechanisms to propagate histone acetylation by p300/CBP.
Nat Commun, 14, 2023

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