Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6YLG
DownloadVisualize
BU of 6ylg by Molmil
Rix1-Rea1 pre-60S particle - 60S core, body 1 (rigid body refinement)
分子名称: 25S rRNA, 5.8S rRNA, 5S rRNA, ...
著者Kater, L, Beckmann, R.
登録日2020-04-07
公開日2020-07-29
最終更新日2020-09-02
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Construction of the Central Protuberance and L1 Stalk during 60S Subunit Biogenesis.
Mol.Cell, 79, 2020
5YQG
DownloadVisualize
BU of 5yqg by Molmil
The structure of 14-3-3 and pNumb peptide
分子名称: 14-3-3 protein eta, Peptide from Protein numb homolog
著者Chen, X, Liu, Z, Wen, W.
登録日2017-11-06
公開日2018-02-07
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural determinants controlling 14-3-3 recruitment to the endocytic adaptor Numb and dissociation of the Numb/alpha-adaptin complex.
J. Biol. Chem., 293, 2018
5YBU
DownloadVisualize
BU of 5ybu by Molmil
Structure of the KANK1 ankyrin domain in complex with KIF21A peptide
分子名称: KN motif and ankyrin repeat domain-containing protein 1, Kinesin-like protein KIF21A
著者Guo, Q, Liao, S, Min, J, Xu, C, Structural Genomics Consortium (SGC)
登録日2017-09-05
公開日2017-12-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Structural basis for the recognition of kinesin family member 21A (KIF21A) by the ankyrin domains of KANK1 and KANK2 proteins.
J. Biol. Chem., 293, 2018
4WHE
DownloadVisualize
BU of 4whe by Molmil
Crystal structure of E. coli phage shock protein A (PspA 1-144)
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Phage shock protein A
著者Parthier, C, Schoepfel, M, Stubbs, M.T, Osadnik, H, Brueser, T.
登録日2014-09-22
公開日2015-09-02
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献PspF-binding domain PspA1-144 and the PspAF complex: New insights into the coiled-coil-dependent regulation of AAA+ proteins.
Mol.Microbiol., 98, 2015
7WUG
DownloadVisualize
BU of 7wug by Molmil
GID subcomplex: Gid12 bound Substrate Receptor Scaffolding module
分子名称: Glucose-induced degradation protein 8, HLJ1_G0042170.mRNA.1.CDS.1, Vacuolar import and degradation protein 24, ...
著者Qiao, S, Cheng, J.D, Schulman, B.A.
登録日2022-02-08
公開日2022-06-08
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Cryo-EM structures of Gid12-bound GID E3 reveal steric blockade as a mechanism inhibiting substrate ubiquitylation.
Nat Commun, 13, 2022
7WH3
DownloadVisualize
BU of 7wh3 by Molmil
Solution structure of human stomatin SPFH domain in a phosphate buffer
分子名称: Stomatin
著者Kataoka, K, Tenno, T, Goda, N, Hibino, E, Hiroaki, H.
登録日2021-12-29
公開日2022-06-08
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献A cryptic phosphate-binding pocket on the SPFH domain of human stomatin that regulates a novel fibril-like self-assembly
Curr Res Struct Biol, 4, 2022
5YST
DownloadVisualize
BU of 5yst by Molmil
RanM189D in complex with RanBP1-CRM1
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Exportin-1,Exportin-1, ...
著者Sun, Q, Zhang, Y.
登録日2017-11-15
公開日2018-11-21
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献RanM189D in complex with RanBP1-CRM1
To Be Published
5YSU
DownloadVisualize
BU of 5ysu by Molmil
Plumbagin in complex with CRM1-RanM189D-RanBP1
分子名称: (2~{R})-2-methyl-5-oxidanyl-2,3-dihydronaphthalene-1,4-dione, CHLORIDE ION, Exportin-1,Exportin-1, ...
著者Sun, Q, Zhang, Y.
登録日2017-11-15
公開日2018-11-21
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献RanL182A in complex with RanBP1-CRM1
To Be Published
5YRO
DownloadVisualize
BU of 5yro by Molmil
RanL182A in complex with RanBP1-CRM1
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Exportin-1,Exportin-1, ...
著者Sun, Q, Zhang, Y.
登録日2017-11-09
公開日2018-11-21
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.396 Å)
主引用文献RanL182A in complex with RanBP1-CRM1
To Be Published
5YTB
DownloadVisualize
BU of 5ytb by Molmil
RanY197A in complex with RanBP1-CRM1
分子名称: 1,2-ETHANEDIOL, ACETATE ION, CHLORIDE ION, ...
著者Sun, Q, Zhang, Y.
登録日2017-11-17
公開日2018-11-21
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献RanY197A in complex with RanBP1-CRM1
To Be Published
8A8F
DownloadVisualize
BU of 8a8f by Molmil
Crystal structure of Glc7 phosphatase in complex with the regulatory region of Ref2
分子名称: MANGANESE (II) ION, PHOSPHATE ION, RNA end formation protein 2, ...
著者Carminati, M, Manav, C.M, Bellini, D, Passmore, L.A.
登録日2022-06-22
公開日2023-11-29
最終更新日2024-06-12
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献A direct interaction between CPF and RNA Pol II links RNA 3' end processing to transcription.
Mol.Cell, 83, 2023
6ZFE
DownloadVisualize
BU of 6zfe by Molmil
Crystal structure of murine S100A9 mutant C80A bound to calcium and zinc
分子名称: CALCIUM ION, Protein S100-A9, SODIUM ION, ...
著者Paris, T, Yatime, L.
登録日2020-06-17
公開日2021-01-13
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Divalent cations influence the dimerization mode of murine S100A9 protein by modulating its disulfide bond pattern.
J.Struct.Biol., 213, 2020
6Z7U
DownloadVisualize
BU of 6z7u by Molmil
Myosin-II motor domain complexed with blebbistatin in a new ADP-release conformation
分子名称: (-)-1-PHENYL-1,2,3,4-TETRAHYDRO-4-HYDROXYPYRROLO[2,3-B]-7-METHYLQUINOLIN-4-ONE, 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, ...
著者Ewert, W, Preller, M.
登録日2020-06-01
公開日2020-10-21
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.58 Å)
主引用文献Structural and Computational Insights into a Blebbistatin-Bound Myosin•ADP Complex with Characteristics of an ADP-Release Conformation along the Two-Step Myosin Power Stoke.
Int J Mol Sci, 21, 2020
4WSN
DownloadVisualize
BU of 4wsn by Molmil
Crystal structure of the COP9 signalosome, a P1 crystal form
分子名称: COP9 signalosome complex subunit 1, COP9 signalosome complex subunit 2, COP9 signalosome complex subunit 3, ...
著者Bunker, R.D, Lingaraju, G.M, Thoma, N.H.
登録日2014-10-28
公開日2015-12-23
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (5.5 Å)
主引用文献Cullin-RING ubiquitin E3 ligase regulation by the COP9 signalosome.
Nature, 531, 2016
6ZDY
DownloadVisualize
BU of 6zdy by Molmil
Crystal structure of WT murine S100A9 bound to calcium and zinc
分子名称: CALCIUM ION, Protein S100-A9, SULFATE ION, ...
著者Yatime, L.
登録日2020-06-15
公開日2021-01-13
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Divalent cations influence the dimerization mode of murine S100A9 protein by modulating its disulfide bond pattern.
J.Struct.Biol., 213, 2020
7WV9
DownloadVisualize
BU of 7wv9 by Molmil
Allosteric modulator ZCZ011 binding to CP55940-bound cannabinoid receptor 1 in complex with Gi protein
分子名称: 2-[(1R,2R,5R)-5-hydroxy-2-(3-hydroxypropyl)cyclohexyl]-5-(2-methyloctan-2-yl)phenol, 6-methyl-3-[(1S)-2-nitro-1-thiophen-2-yl-ethyl]-2-phenyl-1H-indole, Cannabinoid receptor 1, ...
著者Xu, Z, Shao, Z.
登録日2022-02-10
公開日2022-06-15
最終更新日2024-04-03
実験手法ELECTRON MICROSCOPY (3.36 Å)
主引用文献Molecular mechanism of allosteric modulation for the cannabinoid receptor CB1.
Nat.Chem.Biol., 18, 2022
4WVD
DownloadVisualize
BU of 4wvd by Molmil
Identification of a novel FXR ligand that regulates metabolism
分子名称: (2aE,4E,5'S,6S,6'R,7S,8E,11R,13R,15S,17aR,20R,20aR,20bS)-6'-[(2S)-butan-2-yl]-20,20b-dihydroxy-5',6,8,19-tetramethyl-17 -oxo-3',4',5',6,6',10,11,14,15,17,17a,20,20a,20b-tetradecahydro-2H,7H-spiro[11,15-methanofuro[4,3,2-pq][2,6]benzodioxacy clooctadecine-13,2'-pyran]-7-yl 2,6-dideoxy-4-O-(2,6-dideoxy-3-O-methyl-alpha-L-arabino-hexopyranosyl)-3-O-methyl-alpha-L-arabino-hexopyranoside, Bile acid receptor, FORMIC ACID, ...
著者Wang, R, Li, Y.
登録日2014-11-05
公開日2015-02-11
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献The antiparasitic drug ivermectin is a novel FXR ligand that regulates metabolism.
Nat Commun, 4, 2013
6Z2S
DownloadVisualize
BU of 6z2s by Molmil
Crystal structure of adhibin analogue-bound myosin-2
分子名称: 3,6-dibromo-1-(hydroxymethyl)carbazole, ACETATE ION, ADP METAVANADATE, ...
著者Ewert, W, Knoelker, H.-J, Tsiavaliaris, G, Preller, M.
登録日2020-05-18
公開日2021-06-09
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献The synthetic carbazole adhibin acts as selective myosin class-IX inhibitor in lung cancer cells
To Be Published
6A3A
DownloadVisualize
BU of 6a3a by Molmil
MVM NES mutant Nm2 in complex with CRM1-Ran-RanBP1
分子名称: 1,2-ETHANEDIOL, Exportin-1, GLYCEROL, ...
著者Sun, Q, Li, Y.
登録日2018-06-15
公開日2019-06-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Cancer Therapy with Nanoparticle-Medicated Intracellular Expression of Peptide CRM1-Inhibitor.
Int J Nanomedicine, 16, 2021
8ARD
DownloadVisualize
BU of 8ard by Molmil
Myosin VI proximal tail domain, dimeric
分子名称: Unconventional myosin-VI
著者Kikuti, C.M, Sirkia, H, Houdusse, A.
登録日2022-08-16
公開日2023-08-30
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.219 Å)
主引用文献How myosin VI traps its off-state, is activated and dimerizes.
Nat Commun, 14, 2023
6A3E
DownloadVisualize
BU of 6a3e by Molmil
MVM NES mutant Nm15 in complex with CRM1-Ran-RanBP1
分子名称: Exportin-1, GTP-binding nuclear protein Ran, GUANOSINE-5'-TRIPHOSPHATE, ...
著者Sun, Q, Li, Y.
登録日2018-06-15
公開日2019-06-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Cancer Therapy with Nanoparticle-Medicated Intracellular Expression of Peptide CRM1-Inhibitor.
Int J Nanomedicine, 16, 2021
6A3C
DownloadVisualize
BU of 6a3c by Molmil
MVM NES mutant Nm12 in complex with CRM1-Ran-RanBP1
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Exportin-1, ...
著者Sun, Q, Li, Y.
登録日2018-06-15
公開日2019-06-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Cancer Therapy with Nanoparticle-Medicated Intracellular Expression of Peptide CRM1-Inhibitor.
Int J Nanomedicine, 16, 2021
6A3B
DownloadVisualize
BU of 6a3b by Molmil
MVM NES mutant Nm13 in complex with CRM1-Ran-RanBP1
分子名称: 1,2-ETHANEDIOL, Exportin-1, GLYCEROL, ...
著者Sun, Q, Li, Y.
登録日2018-06-15
公開日2019-06-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献Cancer Therapy with Nanoparticle-Medicated Intracellular Expression of Peptide CRM1-Inhibitor.
Int J Nanomedicine, 16, 2021
6AK2
DownloadVisualize
BU of 6ak2 by Molmil
Crystal structure of the syntenin PDZ1 domain in complex with the peptide inhibitor KSL-128018
分子名称: Syntenin-1, peptide inhibitor KSL-128018
著者Jin, Z.Y, Park, J.H, Yun, J.H, Haugaard-Kedstrom, L.M, Lee, W.T.
登録日2018-08-29
公開日2019-09-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.868 Å)
主引用文献A High-Affinity Peptide Ligand Targeting Syntenin Inhibits Glioblastoma.
J.Med.Chem., 64, 2021
7Y1R
DownloadVisualize
BU of 7y1r by Molmil
Human L-TGF-beta1 in complex with the anchor protein LRRC33
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Duan, Z, Zhang, Z.
登録日2022-06-08
公開日2022-08-31
最終更新日2022-09-07
実験手法ELECTRON MICROSCOPY (4.01 Å)
主引用文献Specificity of TGF-beta 1 signal designated by LRRC33 and integrin alpha V beta 8.
Nat Commun, 13, 2022

223532

件を2024-08-07に公開中

PDB statisticsPDBj update infoContact PDBjnumon