PDB: 97138 件ウェブページステータス検索Chemie searchBIRD

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1AQZ	CRYSTAL STRUCTURE OF A HIGHLY SPECIFIC ASPERGILLUS RIBOTOXIN, RESTRICTOCIN 分子名称: PHOSPHATE ION, RESTRICTOCIN 著者 Yang, X, Moffat, K. 登録日 1997-08-04 公開日 1997-11-12 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Insights into specificity of cleavage and mechanism of cell entry from the crystal structure of the highly specific Aspergillus ribotoxin, restrictocin. Structure, 4, 1996
1SDV	Crystal structures of HIV protease V82A and L90M mutants reveal changes in indinavir binding site. 分子名称: CHLORIDE ION, N-[2(R)-HYDROXY-1(S)-INDANYL]-5-[(2(S)-TERTIARY BUTYLAMINOCARBONYL)-4(3-PYRIDYLMETHYL)PIPERAZINO]-4(S)-HYDROXY-2(R)-PHENYLMETHYLPENTANAMIDE, protease RETROPEPSIN 著者 Mahalingam, B, Wang, Y.-F, Boross, P.I, Tozser, J, Louis, J.M, Harrison, R.W, Weber, I.T. 登録日 2004-02-14 公開日 2004-05-25 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Crystal structures of HIV protease V82A and L90M mutants reveal changes in the indinavir-binding site Eur.J.Biochem., 271, 2004
1VZE	L. CASEI THYMIDYLATE SYNTHASE MUTANT E60Q TERNARY COMPLEX WITH DUMP AND CB3717 分子名称: 10-PROPARGYL-5,8-DIDEAZAFOLIC ACID, 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, THYMIDYLATE SYNTHASE 著者 Birdsall, D.L, Finer-Moore, J, Stroud, R.M. 登録日 1996-09-18 公開日 1997-03-12 最終更新日 2021-11-03 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 The separate effects of E60Q in Lactobacillus casei thymidylate synthase delineate between mechanisms for formation of intermediates in catalysis. Protein Eng., 11, 1998
1VZD	L. CASEI THYMIDYLATE SYNTHASE MUTANT E60Q TERNARY COMPLEX WITH FDUMP AND CB3717 分子名称: 10-PROPARGYL-5,8-DIDEAZAFOLIC ACID, 5-FLUORO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE, THYMIDYLATE SYNTHASE 著者 Birdsall, D.L, Finer-Moore, J, Stroud, R.M. 登録日 1996-09-18 公開日 1997-03-12 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 The separate effects of E60Q in Lactobacillus casei thymidylate synthase delineate between mechanisms for formation of intermediates in catalysis. Protein Eng., 11, 1998
1W6U	Structure of human DECR ternary complex 分子名称: 2,4-DIENOYL-COA REDUCTASE, MITOCHONDRIAL PRECURSOR, HEXANOYL-COENZYME A, ... 著者 Alphey, M.S, Byres, E, Li, D, Hunter, W.N. 登録日 2004-08-24 公開日 2004-10-28 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Structure and Reactivity of Human Mitochondrial 2,4-Dienoyl-Coa Reductase: Enzyme-Ligand Interactions in a Distinctive Short-Chain Reductase Active Site J.Biol.Chem., 280, 2005
6XA1	Structure of a drug-like compound stalled human translation termination complex 分子名称: 18S rRNA, 28S rRNA, 40S ribosomal protein S10, ... 著者 Li, W, Cate, J. 登録日 2020-06-03 公開日 2020-10-07 最終更新日 2020-10-14 実験手法 ELECTRON MICROSCOPY (2.8 Å) 主引用文献 Selective inhibition of human translation termination by a drug-like compound. Nat Commun, 11, 2020
6Y75	BIL2 domain from T.thermophila BUBL1 locus (C1A-N143A) 分子名称: DI(HYDROXYETHYL)ETHER, FORMIC ACID, NAD(P)(+)--arginine ADP-ribosyltransferase, ... 著者 Ilari, A, Chiarini, V. 登録日 2020-02-28 公開日 2021-02-03 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural basis of ubiquitination mediated by protein splicing in early Eukarya. Biochim Biophys Acta Gen Subj, 1865, 2021
7JY6	Analysis of a strand exchange reaction with a mini filament of 9-RecA, oligo(dT)27 primary ssDNA, non-homologous 120 bp dsDNA and ATPgammaS 分子名称: DNA (27-MER), DNA (45-MER), MAGNESIUM ION, ... 著者 Pavletich, N.P. 登録日 2020-08-29 公開日 2020-11-04 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (2.5 Å) 主引用文献 Mechanism of strand exchange from RecA-DNA synaptic and D-loop structures. Nature, 586, 2020
2SGA	ELECTRON DENSITY CALCULATIONS AS AN EXTENSION OF PROTEIN STRUCTURE REFINEMENT. STREPTOMYCES GRISEUS PROTEASE AT 1.5 ANGSTROMS RESOLUTION 分子名称: PROTEINASE A 著者 James, M.N.G, Sielecki, A.R. 登録日 1983-01-21 公開日 1983-04-21 最終更新日 2024-06-05 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Electron density calculations as an extension of protein structure refinement. Streptomyces griseus protease A at 1.5 A resolution. J.Mol.Biol., 182, 1985
2ALR	ALDEHYDE REDUCTASE 分子名称: ALDEHYDE REDUCTASE 著者 El-Kabbani, O. 登録日 1994-09-06 公開日 1996-06-20 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.48 Å) 主引用文献 Structures of human and porcine aldehyde reductase: an enzyme implicated in diabetic complications. Acta Crystallogr.,Sect.D, 50, 1994
7DR2	Structure of GraFix PSI tetramer from Cyanophora paradoxa 分子名称: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, BETA-CAROTENE, ... 著者 Kato, K, Nagao, R, Akita, F, Miyazaki, N, Shen, J.R. 登録日 2020-12-25 公開日 2022-02-16 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Structural insights into an evolutionary turning-point of photosystem I from prokaryotes to eukaryotes Biorxiv, 2022
7DR1	Structure of Wild-type PSI monomer2 from Cyanophora paradoxa 分子名称: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, BETA-CAROTENE, ... 著者 Kato, K, Nagao, R, Akita, F, Miyazaki, N, Shen, J.R. 登録日 2020-12-25 公開日 2022-02-16 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Structural insights into an evolutionary turning-point of photosystem I from prokaryotes to eukaryotes Biorxiv, 2022
7DR0	Structure of Wild-type PSI monomer1 from Cyanophora paradoxa 分子名称: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, BETA-CAROTENE, ... 著者 Kato, K, Nagao, R, Akita, F, Miyazaki, N, Shen, J.R. 登録日 2020-12-25 公開日 2022-02-16 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Structural insights into an evolutionary turning-point of photosystem I from prokaryotes to eukaryotes Biorxiv, 2022
2DF7	Crystal structure of infectious bursal disease virus VP2 subviral particle 分子名称: CALCIUM ION, CHLORIDE ION, structural polyprotein VP2 著者 Ko, T.P, Lee, C.C, Wang, M.Y, Wang, A.H. 登録日 2006-02-27 公開日 2006-06-27 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Crystal structure of infectious bursal disease virus VP2 subviral particle at 2.6A resolution: Implications in virion assembly and immunogenicity. J.Struct.Biol., 155, 2006
4D5N	Cryo-EM structures of ribosomal 80S complexes with termination factors and cricket paralysis virus IRES reveal the IRES in the translocated state 分子名称: CRICKET PARALYSIS VIRUS IRES RNA, EUKARYOTIC PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 著者 Muhs, M, Hilal, T, Mielke, T, Skabkin, M.A, Sanbonmatsu, K.Y, Pestova, T.V, Spahn, C.M.T. 登録日 2014-11-06 公開日 2015-02-04 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (9 Å) 主引用文献 Cryo-Em of Ribosomal 80S Complexes with Termination Factors Reveals the Translocated Cricket Paralysis Virus Ires. Mol.Cell, 57, 2015
5M55	Nek2 bound to arylaminopurine 71 分子名称: 6-[(~{Z})-2-(diethylamino)ethenyl]-~{N}-phenyl-7~{H}-purin-2-amine, CHLORIDE ION, SULFATE ION, ... 著者 Bayliss, R. 登録日 2016-10-20 公開日 2016-11-02 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structure-guided design of purine-based probes for selective Nek2 inhibition. Oncotarget, 8, 2017
5M51	Nek2 bound to arylaminopurine compound 8 分子名称: 3-[[6-(cyclohexylmethoxy)-9~{H}-purin-2-yl]amino]benzamide, Serine/threonine-protein kinase Nek2 著者 Bayliss, R, Yeoh, S. 登録日 2016-10-20 公開日 2016-11-09 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.899 Å) 主引用文献 Structure-guided design of purine-based probes for selective Nek2 inhibition. Oncotarget, 8, 2017
5M53	Nek2 bound to arylaminopurine inhibitor 11 分子名称: 1,2-ETHANEDIOL, 3-[[6-(cyclohexylmethoxy)-7~{H}-purin-2-yl]amino]-~{N},~{N}-dimethyl-benzamide, DI(HYDROXYETHYL)ETHER, ... 著者 Bayliss, R, Carr, K.H. 登録日 2016-10-20 公開日 2016-11-09 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structure-guided design of purine-based probes for selective Nek2 inhibition. Oncotarget, 8, 2017
2R5P	Crystal Structure Analysis of HIV-1 Subtype C Protease Complexed with Indinavir 分子名称: CHLORIDE ION, N-[2(R)-HYDROXY-1(S)-INDANYL]-5-[(2(S)-TERTIARY BUTYLAMINOCARBONYL)-4(3-PYRIDYLMETHYL)PIPERAZINO]-4(S)-HYDROXY-2(R)-PHENYLMETHYLPENTANAMIDE, Protease, ... 著者 Coman, R.M, Robbins, A.H, McKenna, R, Dunn, B.M. 登録日 2007-09-04 公開日 2007-11-20 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 The Contribution of Naturally Occurring Polymorphisms in Altering the Biochemical and Structural Characteristics of HIV-1 Subtype C Protease Biochemistry, 47, 2008
1L63	ANALYSIS OF THE INTERACTION BETWEEN CHARGED SIDE CHAINS AND THE ALPHA-HELIX DIPOLE USING DESIGNED THERMOSTABLE MUTANTS OF PHAGE T4 LYSOZYME 分子名称: BETA-MERCAPTOETHANOL, CHLORIDE ION, LYSOZYME 著者 Nicholson, H, Matthews, B.W. 登録日 1991-05-06 公開日 1991-10-15 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Analysis of the interaction between charged side chains and the alpha-helix dipole using designed thermostable mutants of phage T4 lysozyme. Biochemistry, 30, 1991
1L55	ANALYSIS OF THE INTERACTION BETWEEN CHARGED SIDE CHAINS AND THE ALPHA-HELIX DIPOLE USING DESIGNED THERMOSTABLE MUTANTS OF PHAGE T4 LYSOZYME 分子名称: BETA-MERCAPTOETHANOL, CHLORIDE ION, LYSOZYME 著者 Nicholson, H, Matthews, B.W. 登録日 1991-05-06 公開日 1991-10-15 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Analysis of the interaction between charged side chains and the alpha-helix dipole using designed thermostable mutants of phage T4 lysozyme. Biochemistry, 30, 1991
1G3N	STRUCTURE OF A P18(INK4C)-CDK6-K-CYCLIN TERNARY COMPLEX 分子名称: CYCLIN-DEPENDENT KINASE 6, CYCLIN-DEPENDENT KINASE 6 INHIBITOR, V-CYCLIN 著者 Jeffrey, P.D, Tong, L, Pavletich, N.P. 登録日 2000-10-24 公開日 2001-01-10 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Structural basis of inhibition of CDK-cyclin complexes by INK4 inhibitors. Genes Dev., 14, 2000
3WSJ	HTLV-1 protease in complex with the HIV-1 protease inhibitor Indinavir 分子名称: N-[2(R)-HYDROXY-1(S)-INDANYL]-5-[(2(S)-TERTIARY BUTYLAMINOCARBONYL)-4(3-PYRIDYLMETHYL)PIPERAZINO]-4(S)-HYDROXY-2(R)-PHENYLMETHYLPENTANAMIDE, Protease, SULFATE ION, ... 著者 Kuhnert, M, Steuber, H, Diederich, W.E. 登録日 2014-03-14 公開日 2014-10-22 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.404 Å) 主引用文献 Structural basis for HTLV-1 protease inhibition by the HIV-1 protease inhibitor indinavir. J.Med.Chem., 57, 2014
1BPY	HUMAN DNA POLYMERASE BETA COMPLEXED WITH GAPPED DNA AND DDCTP 分子名称: 2',3'-DIDEOXYCYTIDINE 5'-TRIPHOSPHATE, DNA (5'-D(*CP*CP*GP*AP*CP*GP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*DOC)-3'), ... 著者 Sawaya, M.R, Pelletier, H, Prasad, R, Wilson, S.H, Kraut, J. 登録日 1997-04-15 公開日 1997-06-16 最終更新日 2023-08-02 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Crystal structures of human DNA polymerase beta complexed with gapped and nicked DNA: evidence for an induced fit mechanism. Biochemistry, 36, 1997
6MUU	Cryo-EM structure of Csm-crRNA binary complex in type III-A CRISPR-Cas system 分子名称: RNA (25-MER), Uncharacterized protein Csm1, Uncharacterized protein Csm2, ... 著者 Jia, N, Wang, C, Eng, E.T, Patel, D.J. 登録日 2018-10-23 公開日 2018-12-19 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Type III-A CRISPR-Cas Csm Complexes: Assembly, Periodic RNA Cleavage, DNase Activity Regulation, and Autoimmunity. Mol. Cell, 73, 2019

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