PDB: 45385 件ウェブページステータス検索Chemie searchBIRD

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3B34	Crystal structure of E. coli Aminopeptidase N in complex with Phenylalanine 分子名称: Aminopeptidase N, GLYCEROL, MALONATE ION, ... 著者 Addlagatta, A. 登録日 2007-10-19 公開日 2008-05-06 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 Structural basis for the unusual specificity of Escherichia coli aminopeptidase N. Biochemistry, 47, 2008
1QHU	MAMMALIAN BLOOD SERUM HAEMOPEXIN DEGLYCOSYLATED AND IN COMPLEX WITH ITS LIGAND HAEM 分子名称: CHLORIDE ION, PHOSPHATE ION, PROTEIN (HEMOPEXIN), ... 著者 Paoli, M, Baker, H.M, Morgan, W.T, Smith, A, Baker, E.N. 登録日 1999-05-27 公開日 1999-10-06 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Crystal structure of hemopexin reveals a novel high-affinity heme site formed between two beta-propeller domains. Nat.Struct.Biol., 6, 1999
4IZ7	Structure of Non-Phosphorylated ERK2 bound to the PEA-15 Death Effector Domain 分子名称: Astrocytic phosphoprotein PEA-15, Mitogen-activated protein kinase 1, SODIUM ION 著者 Mace, P.D, Robinson, H, Riedl, S.J. 登録日 2013-01-29 公開日 2013-04-10 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structure of ERK2 bound to PEA-15 reveals a mechanism for rapid release of activated MAPK. Nat Commun, 4, 2013
4J2H	Crystal structure of a putative short-chain alcohol dehydrogenase from Sinorhizobium meliloti 1021 (Target NYSGRC-011708) 分子名称: 1,2-ETHANEDIOL, PENTAETHYLENE GLYCOL, SODIUM ION, ... 著者 Sampathkumar, P, Gizzi, A, Ahmed, M, Banu, N, Bhosle, R, Bonanno, J, Chamala, S, Chowdhury, S, Fiser, A, Glenn, A.S, Hammonds, J, Hillerich, B, Khafizov, K, Lafleur, J, Love, J.D, Stead, M, Seidel, R, Toro, R, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC) 登録日 2013-02-04 公開日 2013-05-01 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Crystal structure of a putative short-chain alcohol dehydrogenase from Sinorhizobium meliloti 1021 (Target NYSGRC-011708) to be published
3CSV	Crystal structure of a putative aminoglycoside phosphotransferase (YP_614837.1) from Silicibacter sp. TM1040 at 2.15 A resolution 分子名称: 1,2-ETHANEDIOL, Aminoglycoside phosphotransferase, CHLORIDE ION, ... 著者 Joint Center for Structural Genomics (JCSG) 登録日 2008-04-10 公開日 2008-04-22 最終更新日 2023-02-01 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Crystal structure of a putative aminoglycoside phosphotransferase (YP_614837.1) from Silicibacter sp. TM1040 at 2.15 A resolution To be published
4IVH	Crystal structure of QKLVFFAED nonapeptide segment from amyloid beta incorporated into a macrocyclic beta-sheet template 分子名称: SODIUM ION, TERTIARY-BUTYL ALCOHOL, cyclo[Gln-Lys-Leu-Val-Phe-Phe-Ala-Glu-Asp-(delta-linked-Orn)-Hao-Lys-Hao-(p-bromoPhe)-Thr-(delta-linked-Orn)] 著者 Pham, J.D, Chim, N, Goulding, C.W, Nowick, J.S. 登録日 2013-01-22 公開日 2013-07-31 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.77 Å) 主引用文献 Structures of beta-Amyloid Peptide Oligomers J.Am.Chem.Soc., 2013
3CYM	Crystal structure of protein BAD_0989 from Bifidobacterium adolescentis 分子名称: GLYCEROL, SODIUM ION, Uncharacterized protein BAD_0989 著者 Patskovsky, Y, Ozyurt, S, Freeman, J, Chang, S, Bain, K, Wasserman, S.R, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC) 登録日 2008-04-25 公開日 2008-05-27 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Crystal structure of protein BAD_0989 from Bifidobacterium adolescentis. To be Published
4JES	1.6A resolution Apo structure of the hemophore HasA from Yersinia pestis (Hexagonal Form) 分子名称: HEXAETHYLENE GLYCOL, Hemophore HasA, MALONATE ION, ... 著者 Kumar, R, Lovell, S, Battaile, K.P, Rivera, M. 登録日 2013-02-27 公開日 2013-04-24 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 The Hemophore HasA from Yersinia pestis (HasAyp) Coordinates Hemin with a Single Residue, Tyr75, and with Minimal Conformational Change. Biochemistry, 52, 2013
3LSU	Crystal Structure of SOD2 from Saccharomyces cerevisiae 分子名称: GLYCEROL, MANGANESE (II) ION, SODIUM ION, ... 著者 Sheng, Y, Cascio, D, Valentine, J.S. 登録日 2010-02-12 公開日 2011-02-23 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.896 Å) 主引用文献 Crystal Structure of SOD2 from Saccharomyces cerevisiae To be Published
2ZNK	Thrombin Inhibition 分子名称: D-leucyl-N-(4-carbamimidoylbenzyl)-L-prolinamide, Hirudin variant-1, SODIUM ION, ... 著者 Baum, B, Heine, A, Klebe, G. 登録日 2008-04-26 公開日 2009-04-14 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Non-additivity of functional group contributions in protein-ligand binding: a comprehensive study by crystallography and isothermal titration calorimetry. J.Mol.Biol., 397, 2010
1DX5	Crystal structure of the thrombin-thrombomodulin complex 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, FORMIC ACID, ... 著者 Fuentes-Prior, P, Iwanaga, Y, Huber, R, Pagila, R, Rumennik, G, Seto, M, Morser, J, Light, D.R, Bode, W. 登録日 1999-12-20 公開日 2000-04-10 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural Basis for the Anticoagulant Activity of the Thrombin-Thrombomodulin Complex Nature, 404, 2000
2ZS7	Pantothenate kinase from Mycobacterium tuberculosis (MtPanK) in complex with citrate anion 分子名称: CITRATE ANION, GLYCEROL, Pantothenate kinase, ... 著者 Chetnani, B, Das, S, Kumar, P, Surolia, A, Vijayan, M. 登録日 2008-09-03 公開日 2009-07-21 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.65 Å) 主引用文献 Mycobacterium tuberculosis pantothenate kinase: possible changes in location of ligands during enzyme action Acta Crystallogr.,Sect.D, 65, 2009
1PA6	Crystal structure of the OXYTRICHA nova telomere end-binding protein complexed with noncognate ssDNA GGGGTTTTGAGG 分子名称: 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*AP*GP*G)-3', 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*G)-3', CHLORIDE ION, ... 著者 Theobald, D.L, Schultz, S.C. 登録日 2003-05-13 公開日 2003-06-10 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.45 Å) 主引用文献 Nucleotide shuffling and ssDNA recognition in Oxytricha nova telomere end-binding protein complexes Embo J., 22, 2003
4JRY	Crystal Structure of SB47 TCR-HLA B*3505-LPEP complex 分子名称: Beta-2-microglobulin, MAGNESIUM ION, MHC class I antigen, ... 著者 Liu, Y.C, Rossjohn, J, Gras, S. 登録日 2013-03-22 公開日 2013-04-10 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Highly divergent T-cell receptor binding modes underlie specific recognition of a bulged viral peptide bound to a human leukocyte antigen class I molecule. J.Biol.Chem., 288, 2013
2ZFQ	Exploring thrombin S3 pocket 分子名称: (S)-N-(4-carbamimidoylbenzyl)-1-(2-(cyclopentyloxy)ethanoyl)pyrrolidine-2-carboxamide, BENZAMIDINE, GLYCEROL, ... 著者 Brandt, T, Baum, B, Heine, A, Klebe, G. 登録日 2008-01-10 公開日 2009-01-13 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Exploring thrombin S3 pocket To be Published
2ZFR	Exploring thrombin S3 pocket 分子名称: (S)-N-(4-carbamimidoylbenzyl)-1-(2-(cyclohexyloxy)ethanoyl)pyrrolidine-2-carboxamide, GLYCEROL, Hirudin, ... 著者 Brandt, T, Baum, B, Heine, A, Klebe, G. 登録日 2008-01-10 公開日 2009-01-13 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Exploring thrombin S3 pocket To be Published
2ZIQ	Thrombin Inhibition 分子名称: BENZAMIDINE, Hirudin variant-1, N-(4-carbamimidoylbenzyl)-1-(4-methylpentanoyl)-L-prolinamide, ... 著者 Baum, B, Heine, A, Klebe, G. 登録日 2008-02-20 公開日 2009-01-13 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Understanding Thrombin Inhibition To be Published
4FS2	Base pairing mechanism of N2,3-ethenoguanine with dCTP by human polymerase iota 分子名称: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, DNA (5'-D(*TP*CP*TP*(EFG)P*GP*GP*GP*TP*CP*CP*TP*AP*GP*GP*AP*CP*CP*(DOC))-3'), DNA polymerase iota, ... 著者 Zhao, L. 登録日 2012-06-26 公開日 2012-08-29 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Basis of Miscoding of the DNA Adduct N2,3-Ethenoguanine by Human Y-family DNA Polymerases. J.Biol.Chem., 287, 2012
3LSS	Trypanosoma brucei seryl-tRNA synthetase in complex with ATP 分子名称: ADENOSINE-5'-TRIPHOSPHATE, MALONATE ION, SODIUM ION, ... 著者 Larson, E.T, Merritt, E.A, Medical Structural Genomics of Pathogenic Protozoa (MSGPP) 登録日 2010-02-12 公開日 2010-03-02 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 X-ray crystal structure of Seryl-tRNA synthetase from the eukaryotic parasite Trypanosoma brucei. to be published
3CX4	Crystal Structure of E.coli GS mutant E377A in complex with ADP and oligosaccharides 分子名称: (2R)-2-hydroxy-3-[4-(2-hydroxyethyl)piperazin-1-yl]propane-1-sulfonic acid, 2-{2-[2-2-(METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, ADENOSINE-5'-DIPHOSPHATE, ... 著者 Sheng, F, Geiger, J.H. 登録日 2008-04-23 公開日 2009-04-28 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.29 Å) 主引用文献 Oligosaccharide binding in Escherichia coli glycogen synthase. Biochemistry, 48, 2009
4JHH	Crystal Structure of Medicago truncatula Nodulin 13 (MtN13) in complex with kinetin 分子名称: MALONATE ION, MtN13 protein, N-(FURAN-2-YLMETHYL)-7H-PURIN-6-AMINE, ... 著者 Ruszkowski, M, Sikorski, M, Jaskolski, M. 登録日 2013-03-05 公開日 2013-12-04 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 The landscape of cytokinin binding by a plant nodulin. Acta Crystallogr.,Sect.D, 69, 2013
4JT9	Crystal Structure of human SIRT3 with ELT inhibitor 3 [14-(4-{2-[(methylsulfonyl)amino]ethyl}piperidin-1-yl)thieno[3,2-d]pyrimidine-6-carboxamide] 分子名称: 4-(4-{2-[(methylsulfonyl)amino]ethyl}piperidin-1-yl)thieno[3,2-d]pyrimidine-6-carboxamide, GLYCEROL, NAD-dependent protein deacetylase sirtuin-3, ... 著者 Dai, H. 登録日 2013-03-22 公開日 2013-04-24 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.24 Å) 主引用文献 Discovery of Thieno[3,2-d]pyrimidine-6-carboxamides as Potent Inhibitors of SIRT1, SIRT2, and SIRT3. J.Med.Chem., 56, 2013
4JTH	Crystal structure of F114R/R117Q mutant of 3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8PS) from Neisseria meningitidis 分子名称: 2-dehydro-3-deoxyphosphooctonate aldolase, CHLORIDE ION, GLYCEROL, ... 著者 Allison, T.M, Cochrane, F.C, Jameson, G.B, Parker, E.J. 登録日 2013-03-23 公開日 2013-06-26 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Examining the Role of Intersubunit Contacts in Catalysis by 3-Deoxy-d-manno-octulosonate 8-Phosphate Synthase. Biochemistry, 52, 2013
4J9M	Human DNA polymerase eta-DNA ternary complex: misincorporation G opposite T after an A at the primer 3' end (AA/G) 分子名称: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]guanosine, DNA, DNA polymerase eta, ... 著者 Zhao, Y, Gregory, M, Biertumpfel, C, Hua, Y, Hanaoka, F, Yang, W. 登録日 2013-02-16 公開日 2013-05-01 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Mechanism of somatic hypermutation at the WA motif by human DNA polymerase eta. Proc.Natl.Acad.Sci.USA, 110, 2013
3AGC	F218V mutant of the substrate-bound red chlorophyll catabolite reductase from Arabidopsis thaliana 分子名称: 3-{(2Z,3S,4S)-5-[(Z)-(4-ethenyl-3-methyl-5-oxo-1,5-dihydro-2H-pyrrol-2-ylidene)methyl]-2-[(5R)-2-[(3-ethyl-5-formyl-4-methyl-1H-pyrrol-2-yl)methyl]-5-(methoxycarbonyl)-3-methyl-4-oxo-4,5-dihydrocyclopenta[b]pyrrol-6(1H)-ylidene]-4-methyl-3,4-dihydro-2H-pyrrol-3-yl}propanoic acid, Red chlorophyll catabolite reductase, chloroplastic, ... 著者 Sugishima, M, Fukuyama, K. 登録日 2010-03-30 公開日 2010-09-01 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Crystal structures of the substrate-bound forms of red chlorophyll catabolite reductase: implications for site-specific and stereospecific reaction J.Mol.Biol., 402, 2010

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