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6S0W
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BU of 6s0w by Molmil
The crystal structure of kanamycin B dioxygenase (KanJ) from Streptomyces kanamyceticus in complex with nickel and kanamycin B sulfate
分子名称: (1R,2S,3S,4R,6S)-4,6-DIAMINO-3-[(3-AMINO-3-DEOXY-ALPHA-D-GLUCOPYRANOSYL)OXY]-2-HYDROXYCYCLOHEXYL 2,6-DIAMINO-2,6-DIDEOXY-ALPHA-D-GLUCOPYRANOSIDE, DI(HYDROXYETHYL)ETHER, Kanamycin B dioxygenase, ...
著者Mrugala, B, Niedzialkowska, E, Minor, W, Borowski, T.
登録日2019-06-18
公開日2020-07-08
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.36 Å)
主引用文献A study on the structure, mechanism, and biochemistry of kanamycin B dioxygenase (KanJ)-an enzyme with a broad range of substrates.
Febs J., 288, 2021
4ZSU
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BU of 4zsu by Molmil
Crystal structure of Brevundimonas diminuta phosphotriesterase mutant L7eP-3aG
分子名称: COBALT (II) ION, Parathion hydrolase
著者Mabanglo, M.F, Raushel, F.M.
登録日2015-05-14
公開日2015-09-02
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.011 Å)
主引用文献Variants of Phosphotriesterase for the Enhanced Detoxification of the Chemical Warfare Agent VR.
Biochemistry, 54, 2015
7CEQ
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BU of 7ceq by Molmil
Crystal structure of cysteine desulfurase SufS H121A from Bacillus subtilis
分子名称: Cysteine desulfurase SufS, DI(HYDROXYETHYL)ETHER
著者Nakamura, R, Takahashi, Y, Fujishiro, T.
登録日2020-06-24
公開日2021-06-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Cycloserine enantiomers inhibit PLP-dependent cysteine desulfurase SufS via distinct mechanisms.
Febs J., 2022
7CER
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BU of 7cer by Molmil
Crystal structure of D-cycloserine-bound form of cysteine desulfurase SufS H121A from Bacillus subtilis
分子名称: Cysteine desulfurase SufS, D-[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL]-N,O-CYCLOSERYLAMIDE, DI(HYDROXYETHYL)ETHER, ...
著者Nakamura, R, Takahashi, Y, Fujishiro, T.
登録日2020-06-24
公開日2021-06-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Cycloserine enantiomers inhibit PLP-dependent cysteine desulfurase SufS via distinct mechanisms.
Febs J., 2022
6S0U
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BU of 6s0u by Molmil
The crystal structure of kanamycin B dioxygenase (KanJ) from Streptomyces kanamyceticus in complex with nickel and 2-oxoglutarate
分子名称: 2-OXOGLUTARIC ACID, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
著者Mrugala, B, Porebski, P.J, Niedzialkowska, E, Minor, W, Borowski, T.
登録日2019-06-18
公開日2020-07-08
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献A study on the structure, mechanism, and biochemistry of kanamycin B dioxygenase (KanJ)-an enzyme with a broad range of substrates.
Febs J., 288, 2021
7CEP
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BU of 7cep by Molmil
Crystal structure of L-cycloserine-bound form of cysteine desulfurase SufS from Bacillus subtilis
分子名称: (5-hydroxy-6-methyl-4-{[(3-oxo-2,3-dihydro-1,2-oxazol-4-yl)amino]methyl}pyridin-3-yl)methyl dihydrogen phosphate, Cysteine desulfurase SufS, DI(HYDROXYETHYL)ETHER, ...
著者Nakamura, R, Yasuhiro, T, Fujishiro, T.
登録日2020-06-24
公開日2021-06-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Cycloserine enantiomers inhibit PLP-dependent cysteine desulfurase SufS via distinct mechanisms.
Febs J., 2022
7CEO
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BU of 7ceo by Molmil
Crystal structure of PMP-bound form of cysteine desulfurase SufS from Bacillus subtilis
分子名称: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, Cysteine desulfurase SufS, DI(HYDROXYETHYL)ETHER
著者Nakamura, R, Takahashi, Y, Fujishiro, T.
登録日2020-06-24
公開日2021-06-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.43 Å)
主引用文献Cycloserine enantiomers inhibit PLP-dependent cysteine desulfurase SufS via distinct mechanisms.
Febs J., 2022
7CES
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BU of 7ces by Molmil
Crystal structure of L-cycloserine-bound form of cysteine desulfurase SufS H121A from Bacillus subtilis
分子名称: (5-hydroxy-6-methyl-4-{[(3-oxo-2,3-dihydro-1,2-oxazol-4-yl)amino]methyl}pyridin-3-yl)methyl dihydrogen phosphate, Cysteine desulfurase SufS, DI(HYDROXYETHYL)ETHER
著者Nakamura, R, Takahashi, Y, Fujishiro, T.
登録日2020-06-24
公開日2021-06-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Cycloserine enantiomers inhibit PLP-dependent cysteine desulfurase SufS via distinct mechanisms.
Febs J., 2022
5KK3
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BU of 5kk3 by Molmil
Atomic Resolution Structure of Monomorphic AB42 Amyloid Fibrils
分子名称: Beta-amyloid protein 42
著者Colvin, M.T, Silvers, R, Zhe Ni, Q, Can, T.V, Sergeyev, I, Rosay, M, Donovan, K.J, Michael, B, Wall, J, Linse, S, Griffin, R.G.
登録日2016-06-20
公開日2016-07-13
最終更新日2024-05-01
実験手法SOLID-STATE NMR
主引用文献Atomic Resolution Structure of Monomorphic A beta 42 Amyloid Fibrils.
J.Am.Chem.Soc., 138, 2016
3EEF
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BU of 3eef by Molmil
Crystal structure of N-carbamoylsarcosine amidase from thermoplasma acidophilum
分子名称: N-carbamoylsarcosine amidase related protein, ZINC ION
著者Luo, H.-B, Zheng, H, Chruszcz, M, Zimmerman, M.D, Skarina, T, Egorova, O, Savchenko, A, Joachimiak, A, Minor, W, Midwest Center for Structural Genomics (MCSG)
登録日2008-09-04
公開日2008-09-16
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Crystal structure and molecular modeling study of N-carbamoylsarcosine amidase Ta0454 from Thermoplasma acidophilum.
J.Struct.Biol., 169, 2010
6S0T
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BU of 6s0t by Molmil
The crystal structure of kanamycin B dioxygenase (KanJ) from Streptomyces kanamyceticus in complex with nickel, sulfate, soaked with iodide
分子名称: IODIDE ION, Kanamycin B dioxygenase, NICKEL (II) ION, ...
著者Mrugala, B, Porebski, P.J, Niedzialkowska, E, Cymborowski, M.T, Minor, W, Borowski, T.
登録日2019-06-18
公開日2020-07-08
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献A study on the structure, mechanism, and biochemistry of kanamycin B dioxygenase (KanJ)-an enzyme with a broad range of substrates.
Febs J., 288, 2021
3EH9
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BU of 3eh9 by Molmil
Crystal structure of death associated protein kinase complexed with ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, Death-associated protein kinase 1, SULFATE ION
著者McNamara, L.K, Watterson, D.M, Brunzelle, J.S.
登録日2008-09-11
公開日2009-04-28
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural insight into nucleotide recognition by human death-associated protein kinase.
Acta Crystallogr.,Sect.D, 65, 2009
6SDF
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BU of 6sdf by Molmil
N-terminal SH3 domain of Grb2 protein
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, Growth factor receptor-bound protein 2
著者Bolgov, A.A, Korban, S.A, Luzik, D.A, Rogacheva, O.N, Zhemkov, V.A, Kim, M, Skrynnikov, N.R, Bezprozvanny, I.B.
登録日2019-07-26
公開日2020-01-29
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of the SH3 domain of growth factor receptor-bound protein 2.
Acta Crystallogr.,Sect.F, 76, 2020
3EHA
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BU of 3eha by Molmil
Crystal structure of death associated protein kinase complexed with AMPPNP
分子名称: Death-associated protein kinase 1, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
著者McNamara, L.K, Watterson, D.M, Brunzelle, J.S.
登録日2008-09-11
公開日2009-04-28
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural insight into nucleotide recognition by human death-associated protein kinase.
Acta Crystallogr.,Sect.D, 65, 2009
9EBZ
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BU of 9ebz by Molmil
Escherichia coli Carbonic Anhydrase 2 in Space Group C222(1)
分子名称: Carbonic anhydrase, ZINC ION
著者Rankin, M.R, Smith, J.L.
登録日2024-11-13
公開日2024-11-20
最終更新日2025-02-12
実験手法X-RAY DIFFRACTION (2.66 Å)
主引用文献Serendipitous high-resolution structure of Escherichia coli carbonic anhydrase 2.
Acta Crystallogr.,Sect.F, 81, 2025
6RG2
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BU of 6rg2 by Molmil
Photorhabdus laumondii lectin PLL2 in complex with 3-O-methyl-D-glucose
分子名称: 3-O-methyl-alpha-D-glucopyranose, 3-O-methyl-beta-D-glucopyranose, ACETATE ION, ...
著者Houser, J, Fujdiarova, E, Wimmerova, M.
登録日2019-04-16
公開日2020-07-01
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.12 Å)
主引用文献Heptabladed beta-propeller lectins PLL2 and PHL from Photorhabdus spp. recognize O-methylated sugars and influence the host immune system.
Febs J., 288, 2021
6RGG
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BU of 6rgg by Molmil
Photorhabdus laumondii lectin PLL2 in complex with O-methylated PGL-1-derived disaccharide
分子名称: 1,2-ETHANEDIOL, 3,6-O-dimethyl-D-glucose, 6-deoxy-2,3-di-O-methyl-alpha-L-mannopyranose, ...
著者Houser, J, Fujdiarova, E, Wimmerova, M.
登録日2019-04-16
公開日2020-07-01
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Heptabladed beta-propeller lectins PLL2 and PHL from Photorhabdus spp. recognize O-methylated sugars and influence the host immune system.
Febs J., 288, 2021
5LUD
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BU of 5lud by Molmil
Structure of Cyclophilin A in complex with 2,3-Diaminopyridine
分子名称: Peptidyl-prolyl cis-trans isomerase, pyridine-2,3-diamine
著者McNae, I.W, Nowicki, M.W, Blackburn, E.A, Wear, M.A, Walkinshaw, M.D.
登録日2016-09-08
公開日2017-04-05
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Thermo-kinetic analysis space expansion for cyclophilin-ligand interactions - identification of a new nonpeptide inhibitor using BiacoreTM T200.
FEBS Open Bio, 7, 2017
6NFF
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BU of 6nff by Molmil
Structure of X-prolyl dipeptidyl aminopeptidase from Lactobacillus helveticus
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, PHOSPHATE ION, ...
著者Juers, D.H, Bratt, N.J, Ojennus, D.D.
登録日2018-12-20
公開日2019-10-02
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural characterization of a prolyl aminodipeptidase (PepX) from Lactobacillus helveticus.
Acta Crystallogr.,Sect.F, 75, 2019
8EJN
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BU of 8ejn by Molmil
Structure of dehaloperoxidase A in complex with 2,4-dichlorophenol
分子名称: 2,4-dichlorophenol, DIMETHYL SULFOXIDE, Dehaloperoxidase A, ...
著者Aktar, M.S, de Serrano, V.S, Franzen, S.
登録日2022-09-17
公開日2023-08-23
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.481 Å)
主引用文献Comparative study of the binding and activation of 2,4-dichlorophenol by dehaloperoxidase A and B.
J.Inorg.Biochem., 247, 2023
6NOV
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BU of 6nov by Molmil
A Fab derived from ixekizumab
分子名称: DODECAETHYLENE GLYCOL, Fab Heavy Chain, Fab Light Chain
著者Durbin, J.D, Clawson, D.K, Lu, F, Tian, Y, Lu, J, Schmitt, M, Atwell, S.
登録日2019-01-16
公開日2019-06-19
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.14 Å)
主引用文献Development of tibulizumab, a tetravalent bispecific antibody targeting BAFF and IL-17A for the treatment of autoimmune disease.
Mabs, 11, 2019
5LRQ
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BU of 5lrq by Molmil
BRD4 in complex with ERK5 inhibitor XMD8-92
分子名称: 2-{[2-ethoxy-4-(4-hydroxypiperidin-1-yl)phenyl]amino}-5,11-dimethyl-5,11-dihydro-6H-pyrimido[4,5-b][1,4]benzodiazepin-6-one, Bromodomain-containing protein 4
著者Martin, M.P, Noble, M.E.M.
登録日2016-08-19
公開日2017-08-30
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Identification of a novel orally bioavailable ERK5 inhibitor with selectivity over p38 alpha and BRD4.
Eur.J.Med.Chem., 178, 2019
5LYE
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BU of 5lye by Molmil
Re-refined structure of the bacteriophage T4 short tail fibre PDB entry 1H6W containing 71 additionally identified residues
分子名称: CHLORIDE ION, Gp12, SULFATE ION
著者van Raaij, M.J, Taylor, N.M.I, Leiman, P.G.
登録日2016-09-27
公開日2018-01-17
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Contractile injection systems of bacteriophages and related systems.
Mol. Microbiol., 108, 2018
9DIN
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BU of 9din by Molmil
Structure of ClpC1 N-terminal Domain complexed with semi-synthetic Rufomycin analog
分子名称: ACETIC ACID, ATP-dependent Clp protease ATP-binding subunit ClpC1, CHLORIDE ION, ...
著者Abad-Zapatero, C, Wolf, N.M.
登録日2024-09-05
公開日2025-04-16
最終更新日2025-05-07
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献Structure-Based Analysis of Semisynthetic Anti-TB Rufomycin Analogues.
J.Nat.Prod., 88, 2025
6VPB
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BU of 6vpb by Molmil
A novel membrane-bound 6-phosphogluconate dehydrogenase from the acetic acid bacteria Gluconacetobacter diazotrophicus (Gd6PGD)
分子名称: 6-phosphogluconate dehydrogenase, DI(HYDROXYETHYL)ETHER, ISOPROPYL ALCOHOL, ...
著者Rodriguez-Romero, A, Rodriguez-Hernandez, A.
登録日2020-02-02
公開日2020-07-22
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献The structure of a novel membrane-associated 6-phosphogluconate dehydrogenase from Gluconacetobacter diazotrophicus (Gd6PGD) reveals a subfamily of short-chain 6PGDs.
Febs J., 288, 2021

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