PDB: 160289 件ウェブページステータス検索Chemie searchBIRD

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1Q3G	MurA (Asp305Ala) liganded with tetrahedral reaction intermediate 分子名称: 1,2-ETHANEDIOL, 3'-1-CARBOXY-1-PHOSPHONOOXY-ETHOXY-URIDINE-DIPHOSPHATE-N-ACETYLGLUCOSAMINE, UDP-N-acetylglucosamine 1-carboxyvinyltransferase 著者 Eschenburg, S, Kabsch, W, Healy, M.L, Schonbrunn, E. 登録日 2003-07-29 公開日 2003-12-16 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (2.65 Å) 主引用文献 A New View of the Mechanisms of UDP-N-Acetylglucosamine Enolpyruvyl Transferase (MurA) and 5-Enolpyruvylshikimate-3-phosphate Synthase (AroA) Derived from X-ray Structures of Their Tetrahedral Reaction Intermediate States. J.Biol.Chem., 278, 2003
4LZM	COMPARISON OF THE CRYSTAL STRUCTURE OF BACTERIOPHAGE T4 LYSOZYME AT LOW, MEDIUM, AND HIGH IONIC STRENGTHS 分子名称: BETA-MERCAPTOETHANOL, CHLORIDE ION, T4 LYSOZYME 著者 Bell, J.A, Wilson, K, Zhang, X.-J, Faber, H.R, Nicholson, H, Matthews, B.W. 登録日 1991-01-25 公開日 1992-07-15 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Comparison of the crystal structure of bacteriophage T4 lysozyme at low, medium, and high ionic strengths. Proteins, 10, 1991
3U3D	Plasmodium falciparum Sir2A preferentially hydrolyzes medium and long chain fatty acyl lysine 分子名称: GLYCEROL, Transcriptional regulatory protein sir2 homologue, ZINC ION, ... 著者 Zhou, Y, Hao, Q. 登録日 2011-10-05 公開日 2011-11-09 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Plasmodium falciparum Sir2A Preferentially Hydrolyzes Medium and Long Chain Fatty Acyl Lysine Acs Chem.Biol., 2011
3U31	Plasmodium falciparum Sir2A preferentially hydrolyzes medium and long chain fatty acyl lysine 分子名称: GLYCEROL, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Transcriptional regulatory protein sir2 homologue, ... 著者 Zhou, Y, Hao, Q. 登録日 2011-10-04 公開日 2011-11-09 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Plasmodium falciparum Sir2A Preferentially Hydrolyzes Medium and Long Chain Fatty Acyl Lysine Acs Chem.Biol., 2011
2TS1	STRUCTURE OF TYROSYL-T/RNA SYNTHETASE REFINED AT 2.3 ANGSTROMS RESOLUTION. INTERACTION OF THE ENZYME WITH THE TYROSYL ADENYLATE INTERMEDIATE 分子名称: TYROSYL-TRNA SYNTHETASE 著者 Brick, P, Bhat, T.N, Blow, D.M. 登録日 1989-06-29 公開日 1989-10-15 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structure of tyrosyl-tRNA synthetase refined at 2.3 A resolution. Interaction of the enzyme with the tyrosyl adenylate intermediate. J.Mol.Biol., 208, 1989
2IYK	Crystal structure of the UPF2-interacting domain of nonsense mediated mRNA decay factor UPF1 分子名称: REGULATOR OF NONSENSE TRANSCRIPTS 1, ZINC ION 著者 Kadlec, J, Guilligay, D, Ravelli, R.B, Cusack, S. 登録日 2006-07-18 公開日 2006-08-30 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.95 Å) 主引用文献 Crystal Structure of the Upf2-Interacting Domain of Nonsense-Mediated Mrna Decay Factor Upf1. RNA, 12, 2006
4CYS	G6 mutant of PAS, arylsulfatase from Pseudomonas Aeruginosa, in complex with Phenylphosphonic acid 分子名称: AMMONIUM ION, ARYLSULFATASE, CALCIUM ION, ... 著者 Miton, C.M, Jonas, S, Mohammed, M.F, Fischer, G, Loo, B.v, Kintses, B, Hyvonen, M, Tokuriki, N, Hollfelder, F. 登録日 2014-04-14 公開日 2015-04-29 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.88 Å) 主引用文献 Evolutionary repurposing of a sulfatase: A new Michaelis complex leads to efficient transition state charge offset. Proc. Natl. Acad. Sci. U.S.A., 115, 2018
4CXU	G4 mutant of PAS, arylsulfatase from Pseudomonas Aeruginosa, in complex with 3-Br-Phenolphenylphosphonate 分子名称: 3-bromophenyl hydrogen (S)-phenylphosphonate, ARYLSULFATASE, CALCIUM ION 著者 Miton, C.M, Jonas, S, Mohammed, M.F, Fischer, G, Loo, B.v, Kintses, B, Hyvonen, M, Tokuriki, N, Hollfelder, F. 登録日 2014-04-08 公開日 2015-04-22 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.03 Å) 主引用文献 Evolutionary repurposing of a sulfatase: A new Michaelis complex leads to efficient transition state charge offset. Proc. Natl. Acad. Sci. U.S.A., 115, 2018
2DBW	Crystal Structure of Gamma-glutamyltranspeptidase from Escherichia coli Acyl-Enzyme Intermediate 分子名称: GAMMA-L-GLUTAMIC ACID, GLYCEROL, Gamma-glutamyltranspeptidase 著者 Okada, T, Wada, K, Fukuyama, K. 登録日 2005-12-16 公開日 2006-04-18 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Crystal structures of gamma-glutamyltranspeptidase from Escherichia coli, a key enzyme in glutathione metabolism, and its reaction intermediate Proc.Natl.Acad.Sci.USA, 103, 2006
4CXK	G9 mutant of PAS, arylsulfatase from Pseudomonas Aeruginosa 分子名称: ARYLSULFATASE, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ... 著者 Miton, C.M, Jonas, S, Mohammed, M.F, Fischer, G, Loo, B.v, Kintses, B, Hyvonen, M, Tokuriki, N, Hollfelder, F. 登録日 2014-04-07 公開日 2015-04-22 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.86 Å) 主引用文献 Evolutionary repurposing of a sulfatase: A new Michaelis complex leads to efficient transition state charge offset. Proc. Natl. Acad. Sci. U.S.A., 115, 2018
3NOU	Light-induced intermediate structure L3 of P. aeruginosa bacteriophytochrome 分子名称: BILIVERDINE IX ALPHA, Bacteriophytochrome 著者 Yang, X, Ren, Z, Moffat, K. 登録日 2010-06-25 公開日 2012-11-28 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Temperature-scan cryocrystallography reveals reaction intermediates in bacteriophytochrome. Nature, 479, 2011
3NOP	Light-induced intermediate structure L1 of Pseudomonas aeruginosa bacteriophytochrome 分子名称: BILIVERDINE IX ALPHA, Bacteriophytochrome 著者 Yang, X, Ren, Z, Moffat, K. 登録日 2010-06-25 公開日 2012-11-07 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Temperature-scan cryocrystallography reveals reaction intermediates in bacteriophytochrome. Nature, 479, 2011
4CYR	G4 mutant of PAS, arylsulfatase from Pseudomonas Aeruginosa 分子名称: ARYLSULFATASE, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ... 著者 Miton, C.M, Jonas, S, Mohammed, M.F, Fischer, G, Loo, B.v, Kintses, B, Hyvonen, M, Tokuriki, N, Hollfelder, F. 登録日 2014-04-14 公開日 2015-04-29 最終更新日 2019-07-10 実験手法 X-RAY DIFFRACTION (1.72 Å) 主引用文献 Evolutionary repurposing of a sulfatase: A new Michaelis complex leads to efficient transition state charge offset. Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6AU4	Crystal structure of the major quadruplex formed in the human c-MYC promoter 分子名称: DNA (5'-D(*TP*GP*AP*GP*GP*GP*TP*GP*GP*GP*TP*AP*GP*GP*GP*TP*GP*GP*GP*TP*AP*A)-3'), POTASSIUM ION 著者 Stump, S, Mou, T.C, Sprang, S.R, Natale, N.R, Beall, H.D. 登録日 2017-08-30 公開日 2018-09-12 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 Crystal structure of the major quadruplex formed in the promoter region of the human c-MYC oncogene. PLoS ONE, 13, 2018
1P04	STRUCTURE ANALYSIS OF SPECIFICITY. ALPHA-LYTIC PROTEASE COMPLEXES WITH ANALOGUES OF REACTION INTERMEDIATES 分子名称: ALPHA-LYTIC PROTEASE, METHOXYSUCCINYL-ALA-ALA-PRO-ISOLEUCINE BORONIC ACID INHIBITOR, SULFATE ION 著者 Bone, R, Agard, D.A. 登録日 1989-04-24 公開日 1990-04-15 最終更新日 2024-06-05 実験手法 X-RAY DIFFRACTION (2.55 Å) 主引用文献 Structural analysis of specificity: alpha-lytic protease complexes with analogues of reaction intermediates. Biochemistry, 28, 1989
1P05	STRUCTURE ANALYSIS OF SPECIFICITY. ALPHA-LYTIC PROTEASE COMPLEXES WITH ANALOGUES OF REACTION INTERMEDIATES 分子名称: ALPHA-LYTIC PROTEASE, METHOXYSUCCINYL-ALA-ALA-PRO-NORLEUCINE BORONIC ACID INHIBITOR, SULFATE ION 著者 Bone, R, Agard, D.A. 登録日 1989-04-24 公開日 1990-04-15 最終更新日 2024-06-05 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structural analysis of specificity: alpha-lytic protease complexes with analogues of reaction intermediates. Biochemistry, 28, 1989
1P06	STRUCTURE ANALYSIS OF SPECIFICITY. ALPHA-LYTIC PROTEASE COMPLEXES WITH ANALOGUES OF REACTION INTERMEDIATES 分子名称: ALPHA-LYTIC PROTEASE, METHOXYSUCCINYL-ALA-ALA-PRO-PHENYLALANINE BORONIC ACID INHIBITOR, SULFATE ION 著者 Bone, R, Agard, D.A. 登録日 1989-04-24 公開日 1990-04-15 最終更新日 2024-06-05 実験手法 X-RAY DIFFRACTION (2.34 Å) 主引用文献 Structural analysis of specificity: alpha-lytic protease complexes with analogues of reaction intermediates. Biochemistry, 28, 1989
1P02	STRUCTURE ANALYSIS OF SPECIFICITY. ALPHA-LYTIC PROTEASE COMPLEXES WITH ANALOGUES OF REACTION INTERMEDIATES 分子名称: ALPHA-LYTIC PROTEASE, METHOXYSUCCINYL-ALA-ALA-PRO-ALANINE BORONIC ACID INHIBITOR, SULFATE ION 著者 Bone, R, Agard, D.A. 登録日 1989-04-24 公開日 1990-04-15 最終更新日 2024-06-05 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural analysis of specificity: alpha-lytic protease complexes with analogues of reaction intermediates. Biochemistry, 28, 1989
3NOT	Light-induced intermediate structure L2 of P. aeruginosa bacteriophytochrome 分子名称: BILIVERDINE IX ALPHA, Bacteriophytochrome 著者 Yang, X, Ren, Z, Moffat, K. 登録日 2010-06-25 公開日 2012-11-28 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Temperature-scan cryocrystallography reveals reaction intermediates in bacteriophytochrome. Nature, 479, 2011
1B2R	FERREDOXIN-NADP+ REDUCTASE (MUTATION: E 301 A) 分子名称: FLAVIN-ADENINE DINUCLEOTIDE, PROTEIN (FERREDOXIN-NADP+ REDUCTASE), SULFATE ION 著者 Hermoso, J.A, Mayoral, T, Medina, M, Martinez-Ripoll, M, Martinez-Julvez, M, Sanz-Aparicio, J, Gomez-Moreno, C. 登録日 1998-11-27 公開日 1999-12-15 最終更新日 2023-08-09 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structural basis of the catalytic role of Glu301 in Anabaena PCC 7119 ferredoxin-NADP+ reductase revealed by x-ray crystallography. Proteins, 38, 2000
1JUC	Crystal Structure Analysis of a Holliday Junction Formed by CCGGTACCGG 分子名称: 5'-D(*CP*CP*GP*GP*TP*AP*CP*CP*GP*G)-3' 著者 Thorpe, J.H, Teixeira, S.C.M, Gale, B.C, Cardin, C.J. 登録日 2001-08-24 公開日 2002-02-22 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 Structural characterization of a new crystal form of the four-way Holliday junction formed by the DNA sequence d(CCGGTACCGG)2: sequence versus lattice? Acta Crystallogr.,Sect.D, 58, 2002
6LKH	Two-component system protein mediate signal transduction 分子名称: 6-O-phosphono-alpha-D-glucopyranose, ABC transporter, solute-binding protein, ... 著者 Wang, M, Tao, Y. 登録日 2019-12-19 公開日 2021-03-17 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (2.534 Å) 主引用文献 Interface switch mediates signal transmission in a two-component system. Proc.Natl.Acad.Sci.USA, 117, 2020
1XNS	Peptide trapped Holliday junction intermediate in Cre-loxP recombination 分子名称: Recombinase CRE, loxP DNA 著者 Ghosh, K, Lau, C.K, Guo, F, Segall, A.M, Van Duyne, G.D. 登録日 2004-10-05 公開日 2004-12-14 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Peptide trapping of the Holliday junction intermediate in Cre-loxP site-specific recombination. J.Biol.Chem., 280, 2005
1S2D	Purine 2'-Deoxyribosyl complex with arabinoside: Ribosylated Intermediate (AraA) 分子名称: 2-deoxy-2-fluoro-alpha-D-arabinofuranose, ADENINE, Nucleoside 2-deoxyribosyltransferase 著者 Anand, R, Kaminski, P.A, Ealick, S.E. 登録日 2004-01-08 公開日 2004-03-30 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structures of purine 2'-deoxyribosyltransferase, substrate complexes, and the ribosylated enzyme intermediate at 2.0 A resolution. Biochemistry, 43, 2004
4CXS	G4 mutant of PAS, arylsulfatase from Pseudomonas aeruginosa, in complex with Phenylphosphonic acid 分子名称: ARYLSULFATASE, CALCIUM ION, SULFATE ION, ... 著者 Miton, C.M, Jonas, S, Mohammed, M.F, Fischer, G, Loo, B.v, Kintses, B, Hyvonen, M, Tokuriki, N, Hollfelder, F. 登録日 2014-04-08 公開日 2015-05-13 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Evolutionary repurposing of a sulfatase: A new Michaelis complex leads to efficient transition state charge offset. Proc. Natl. Acad. Sci. U.S.A., 115, 2018

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